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2GN0
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BU of 2gn0 by Molmil
Crystal structure of dimeric biodegradative threonine deaminase (TdcB) from Salmonella typhimurium at 1.7 A resolution (Triclinic form with one complete subunit built in alternate conformation)
Descriptor: SODIUM ION, Threonine dehydratase catabolic
Authors:Simanshu, D.K, Savithri, H.S, Murthy, M.R.
Deposit date:2006-04-09
Release date:2006-11-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures of Salmonella typhimurium biodegradative threonine deaminase and its complex with CMP provide structural insights into ligand-induced oligomerization and enzyme activation.
J.Biol.Chem., 281, 2006
5L6S
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BU of 5l6s by Molmil
Crystal structure of E. coli ADP-glucose pyrophosphorylase (AGPase) in complex with a positive allosteric regulator beta-fructose-1,6-diphosphate (FBP) - AGPase*FBP
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, Glucose-1-phosphate adenylyltransferase, SULFATE ION
Authors:Cifuente, J.O, Albesa-Jove, D, Comino, N, Madariaga-Marcos, J, Agirre, J, Lopez-Fernandez, S, Garcia-Alija, M, Guerin, M.E.
Deposit date:2016-05-31
Release date:2016-09-07
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.04 Å)
Cite:Structural Basis of Glycogen Biosynthesis Regulation in Bacteria.
Structure, 24, 2016
8UCV
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BU of 8ucv by Molmil
Complete DNA termination subcomplex 1 of Xenopus laevis DNA polymerase alpha-primase
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA polymerase alpha catalytic subunit, DNA primase large subunit, ...
Authors:Mullins, E.A, Chazin, W.C, Eichman, B.F.
Deposit date:2023-09-27
Release date:2023-10-11
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.81 Å)
Cite:A mechanistic model of primer synthesis from catalytic structures of DNA polymerase alpha-primase.
Nat.Struct.Mol.Biol., 31, 2024
3T07
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BU of 3t07 by Molmil
Crystal structure of S. aureus Pyruvate Kinase in complex with a naturally occurring bis-indole alkaloid
Descriptor: (3S,5R)-3,5-bis(6-bromo-1H-indol-3-yl)piperazin-2-one, PHOSPHATE ION, Pyruvate kinase
Authors:Worrall, L.J, Vuckovic, M, Strynadka, N.C.J.
Deposit date:2011-07-19
Release date:2011-10-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Methicillin-resistant Staphylococcus aureus (MRSA) pyruvate kinase as a target for bis-indole alkaloids with antibacterial activities.
J.Biol.Chem., 286, 2011
6G3F
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BU of 6g3f by Molmil
Crystal structure of EDDS lyase in complex with fumarate
Descriptor: Argininosuccinate lyase, DI(HYDROXYETHYL)ETHER, FUMARIC ACID
Authors:Poddar, H, Thunnissem, A.M.W.H, Poelarends, G.J.
Deposit date:2018-03-25
Release date:2018-05-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.222 Å)
Cite:Structural Basis for the Catalytic Mechanism of Ethylenediamine- N, N'-disuccinic Acid Lyase, a Carbon-Nitrogen Bond-Forming Enzyme with a Broad Substrate Scope.
Biochemistry, 57, 2018
6G3I
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BU of 6g3i by Molmil
Crystal structure of EDDS lyase in complex with N-(2-aminoethyl)aspartic acid (AEAA)
Descriptor: (2~{S})-2-(2-azanylethylamino)butanedioic acid, Argininosuccinate lyase, FUMARIC ACID
Authors:Poddar, H, Thunnissem, A.M.W.H, Poelarends, G.J.
Deposit date:2018-03-25
Release date:2018-05-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Structural Basis for the Catalytic Mechanism of Ethylenediamine- N, N'-disuccinic Acid Lyase, a Carbon-Nitrogen Bond-Forming Enzyme with a Broad Substrate Scope.
Biochemistry, 57, 2018
6R35
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BU of 6r35 by Molmil
Structure of the LecB lectin from Pseudomonas aeruginosa strain PAO1 in complex with lewis x tetrasaccharide
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Fucose-binding lectin PA-IIL, ...
Authors:Lepsik, M, Sommer, R, Kuhaudomlarp, S, Lelimousin, M, Varrot, A, Titz, A, Imberty, A.
Deposit date:2019-03-19
Release date:2019-06-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Induction of rare conformation of oligosaccharide by binding to calcium-dependent bacterial lectin: X-ray crystallography and modelling study.
Eur.J.Med.Chem., 177, 2019
8TQO
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BU of 8tqo by Molmil
Eukaryotic translation initiation factor 2B tetramer
Descriptor: Translation initiation factor eIF-2B subunit beta, Translation initiation factor eIF-2B subunit delta, Translation initiation factor eIF-2B subunit epsilon, ...
Authors:Wang, L, Lawrence, R, Sangwan, S, Anand, A, Shoemaker, S, Deal, A, Marqusee, S, Watler, P.
Deposit date:2023-08-08
Release date:2023-12-06
Last modified:2024-04-10
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:A helical fulcrum in eIF2B coordinates allosteric regulation of stress signaling.
Nat.Chem.Biol., 20, 2024
3PVS
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BU of 3pvs by Molmil
Structure and biochemical activities of Escherichia coli MgsA
Descriptor: PHOSPHATE ION, Replication-associated recombination protein A
Authors:Page, A.N, George, N.P, Marceau, A.H, Cox, M.M, Keck, J.L.
Deposit date:2010-12-07
Release date:2011-02-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure and Biochemical Activities of Escherichia coli MgsA.
J.Biol.Chem., 286, 2011
5L4I
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BU of 5l4i by Molmil
Crystal Structure of Human Transthyretin in Complex with Clonixin
Descriptor: 2-(3-chloro-2-methylanilino)pyridine-3-carboxylic acid, SODIUM ION, Transthyretin
Authors:Grundstrom, C, Hall, M, Zhang, J, Olofsson, A, Andersson, P, Sauer-Eriksson, A.E.
Deposit date:2016-05-25
Release date:2016-10-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure-Based Virtual Screening Protocol for in Silico Identification of Potential Thyroid Disrupting Chemicals Targeting Transthyretin.
Environ. Sci. Technol., 50, 2016
2ZII
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BU of 2zii by Molmil
Crystal Structure of Yeast Vps74-N-term Truncation Variant
Descriptor: Vacuolar protein sorting-associated protein 74
Authors:Schmitz, K.R, Li, S, Setty, T.G, Ferguson, K.M.
Deposit date:2008-02-18
Release date:2008-04-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Golgi localization of glycosyltransferases requires a Vps74p oligomer.
Dev.Cell, 14, 2008
6H4H
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BU of 6h4h by Molmil
Usp28 catalytic domain variant E593D in complex with UbPA
Descriptor: Polyubiquitin-B, SULFATE ION, Ubiquitin carboxyl-terminal hydrolase 28, ...
Authors:Klemm, T.A, Sauer, F, Kisker, C.
Deposit date:2018-07-21
Release date:2019-03-27
Last modified:2019-05-15
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Differential Oligomerization of the Deubiquitinases USP25 and USP28 Regulates Their Activities.
Mol.Cell, 74, 2019
1T3M
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BU of 1t3m by Molmil
Structure of the isoaspartyl peptidase with L-asparaginase activity from E. coli
Descriptor: NITRATE ION, Putative L-asparaginase, SODIUM ION
Authors:Prahl, A, Pazgier, M, Hejazi, M, Lockau, W, Lubkowski, J.
Deposit date:2004-04-27
Release date:2004-07-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure of the isoaspartyl peptidase with L-asparaginase activity from Escherichia coli.
Acta Crystallogr.,Sect.D, 60, 2004
3TUO
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BU of 3tuo by Molmil
Crystal structure of N-terminal domain of DNA-binding protein satb1
Descriptor: DNA-binding protein SATB1
Authors:Wang, Z, Yang, X, Long, J, Shen, Y.
Deposit date:2011-09-17
Release date:2012-02-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.697 Å)
Cite:The structural basis for the oligomerization of the N-terminal domain of SATB1
Nucleic Acids Res., 40, 2012
3TW7
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BU of 3tw7 by Molmil
Structure of Rhizobium etli pyruvate carboxylase T882A crystallized without acetyl coenzyme-A
Descriptor: CHLORIDE ION, MAGNESIUM ION, Pyruvate carboxylase protein, ...
Authors:St Maurice, M, Kumar, S, Lietzan, A.D.
Deposit date:2011-09-21
Release date:2011-10-12
Last modified:2011-12-28
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Interaction between the biotin carboxyl carrier domain and the biotin carboxylase domain in pyruvate carboxylase from Rhizobium etli.
Biochemistry, 50, 2011
1U0R
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BU of 1u0r by Molmil
Crystal structure of Mycobacterium tuberculosis NAD kinase
Descriptor: Inorganic polyphosphate/ATP-NAD kinase
Authors:Garavaglia, S, Raffaelli, N, Finaurini, L, Magni, G, Rizzi, M, TB Structural Genomics Consortium (TBSGC)
Deposit date:2004-07-14
Release date:2004-08-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A novel fold revealed by Mycobacterium tuberculosis NAD kinase, a key allosteric enzyme in NADP biosynthesis
J.Biol.Chem., 279, 2004
1UEI
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BU of 1uei by Molmil
Crystal structure of human uridine-cytidine kinase 2 complexed with a feedback-inhibitor, UTP
Descriptor: URIDINE 5'-TRIPHOSPHATE, Uridine-cytidine kinase 2
Authors:Suzuki, N.N, Koizumi, K, Fukushima, M, Matsuda, A, Inagaki, F.
Deposit date:2003-05-16
Release date:2004-05-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for the specificity, catalysis, and regulation of human uridine-cytidine kinase
STRUCTURE, 12, 2004
3CE5
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BU of 3ce5 by Molmil
A bimolecular parallel-stranded human telomeric quadruplex in complex with a 3,6,9-trisubstituted acridine molecule BRACO19
Descriptor: 9-[4-(n,n-dimethylamino)phenylamino]-3,6-bis(3-pyrrolidinopropionamido) acridine, DNA (5'-D(*DTP*DAP*DGP*DGP*DGP*DTP*DTP*DAP*DGP*DGP*DGP*DT)-3'), POTASSIUM ION
Authors:Campbell, N.H, Parkinson, G.N, Reszka, A.P, Neidle, S.
Deposit date:2008-02-28
Release date:2008-05-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis of DNA quadruplex recognition by an acridine drug.
J.Am.Chem.Soc., 130, 2008
3CXR
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BU of 3cxr by Molmil
Crystal structure of gluconate 5-dehydrogase from streptococcus suis type 2
Descriptor: Dehydrogenase with different specificities
Authors:Peng, H, Gao, F, Zhang, Q, Liu, Y, Gao, G.F.
Deposit date:2008-04-25
Release date:2009-03-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural insight into the catalytic mechanism of gluconate 5-dehydrogenase from Streptococcus suis: Crystal structures of the substrate-free and quaternary complex enzymes.
Protein Sci., 18, 2009
3UJO
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BU of 3ujo by Molmil
Galactose-specific seed lectin from Dolichos lablab in complex with adenine and galactose
Descriptor: 1,2-ETHANEDIOL, ADENINE, CALCIUM ION, ...
Authors:Shetty, K.N, Latha, V.L, Rao, R.N, Nadimpalli, S.K, Suguna, K.
Deposit date:2011-11-08
Release date:2012-11-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Affinity of a galactose-specific legume lectin from Dolichos lablab to adenine revealed by X-ray cystallography.
Iubmb Life, 65, 2013
3UCF
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BU of 3ucf by Molmil
Crystal structure of a small-chain dehydrogenase
Descriptor: Dehydrogenase
Authors:Buysschaert, G, Verstraete, K, Savvides, S, Vergauwen, B.
Deposit date:2011-10-26
Release date:2013-01-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.347 Å)
Cite:Structural and biochemical characterization of an atypical short-chain dehydrogenase/reductase reveals an unusual cofactor preference.
Febs J., 280, 2013
3UJQ
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BU of 3ujq by Molmil
Galactose-specific lectin from Dolichos lablab in complex with galactose
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Shetty, K.N, Latha, V.L, Rao, R.N, Nadimpalli, S.K, Suguna, K.
Deposit date:2011-11-08
Release date:2012-11-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Affinity of a galactose-specific legume lectin from Dolichos lablab to adenine revealed by X-ray cystallography.
Iubmb Life, 65, 2013
3AWD
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BU of 3awd by Molmil
Crystal structure of gox2181
Descriptor: CADMIUM ION, MAGNESIUM ION, Putative polyol dehydrogenase
Authors:Adam Yuan, Y, Yuan, Z.
Deposit date:2011-03-18
Release date:2012-02-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Biochemical and structural analysis of Gox2181, a new member of the SDR superfamily from Gluconobacter oxydans.
Biochem.Biophys.Res.Commun., 415, 2011
3BC8
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BU of 3bc8 by Molmil
Crystal structure of mouse selenocysteine synthase
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, O-phosphoseryl-tRNA(Sec) selenium transferase
Authors:Ganichkin, O.M, Wahl, M.C.
Deposit date:2007-11-12
Release date:2007-12-18
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure and catalytic mechanism of eukaryotic selenocysteine synthase.
J.Biol.Chem., 283, 2008
3P9F
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BU of 3p9f by Molmil
Urate oxidase-azaxanthine-azide ternary complex
Descriptor: 8-AZAXANTHINE, AZIDE ION, SODIUM ION, ...
Authors:Gabison, L, Colloc'H, N, El Hajji, M, Castro, B, Chiadmi, M, Prange, T.
Deposit date:2010-10-17
Release date:2011-09-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Azide and cyanide have different inhibition modes of urate oxidase
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PDB entries from 2024-07-17

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