PDB: 1462 件ウェブページステータス検索Chemie searchBIRD

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4V84	Crystal structure of a complex containing domain 3 of CrPV IGR IRES RNA bound to the 70S ribosome. 分子名称: 23S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Zhu, J, Korostelev, A, Costantino, D, Noller, H.F, Kieft, J.S. 登録日 2010-12-13 公開日 2014-07-09 最終更新日 2019-07-17 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Crystal structures of complexes containing domains from two viral internal ribosome entry site (IRES) RNAs bound to the 70S ribosome. Proc.Natl.Acad.Sci.USA, 108, 2011
4V8O	Crystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3 分子名称: 16S RRNA, 23S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ... 著者 Jin, H, Kelley, A.C, Ramakrishnan, V. 登録日 2011-07-26 公開日 2014-07-09 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.8 Å) 主引用文献 Crystal Structure of the Hybrid State of Ribosome in Complex with the Guanosine Triphosphatase Release Factor 3. Proc.Natl.Acad.Sci.USA, 108, 2011
4V8U	Crystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex. 分子名称: 16S RIBOSOMAL RNA, 23S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ... 著者 Gao, Y.G, Feng, S, Chen, Y. 登録日 2012-08-28 公開日 2014-07-09 最終更新日 2019-10-30 実験手法 X-RAY DIFFRACTION (3.7 Å) 主引用文献 Crystal structure of 70S ribosome with both cognate tRNAs in the E and P sites representing an authentic elongation complex. PLoS ONE, 8, 2013
4V9M	70S Ribosome translocation intermediate FA-4.2A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state. 分子名称: 23S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Zhou, J, Lancaster, L, Donohue, J.P, Noller, H.F. 登録日 2013-04-25 公開日 2014-07-09 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (4 Å) 主引用文献 Crystal structures of EF-G-ribosome complexes trapped in intermediate states of translocation. Science, 340, 2013
4V88	The structure of the eukaryotic ribosome at 3.0 A resolution. 分子名称: 18S RIBOSOMAL RNA, 18S rRNA, 25S rRNA, ... 著者 Ben-Shem, A, Garreau de Loubresse, N, Melnikov, S, Jenner, L, Yusupova, G, Yusupov, M. 登録日 2011-10-11 公開日 2014-07-09 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 The structure of the eukaryotic ribosome at 3.0 angstrom resolution. Science, 334, 2011
4V4J	Interactions and Dynamics of the Shine-Dalgarno Helix in the 70S Ribosome. 分子名称: 16S RNA, 23S LARGE SUBUNIT RIBOSOMAL RNA, 30S ribosomal protein S10, ... 著者 Korostelev, A, Trakhanov, S, Asahara, H, Laurberg, M, Noller, H.F. 登録日 2007-07-18 公開日 2014-07-09 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.83 Å) 主引用文献 Interactions and dynamics of the Shine Dalgarno helix in the 70S ribosome. Proc.Natl.Acad.Sci.Usa, 104, 2007
4V4Z	70S Thermus thermophilous ribosome functional complex with mRNA and E- and P-site tRNAs at 4.5A. 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Jenner, L, Yusupova, G, Rees, B, Moras, D, Yusupov, M. 登録日 2006-06-27 公開日 2014-07-09 最終更新日 2017-11-22 実験手法 X-RAY DIFFRACTION (4.51 Å) 主引用文献 Structural basis for messenger RNA movement on the ribosome. Nature, 444, 2006
4V5A	Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMet 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S RIBOSOMAL PROTEIN S10, ... 著者 Weixlbaumer, A, Petry, S, Dunham, C.M, Selmer, M, Kelley, A.C, Ramakrishnan, V. 登録日 2007-06-28 公開日 2014-07-09 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Crystal structure of the ribosome recycling factor bound to the ribosome. Nat. Struct. Mol. Biol., 14, 2007
4V5S	The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome. 分子名称: 16S RRNA, 23S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ... 著者 Schmeing, T.M, Voorhees, R.M, Ramakrishnan, V. 登録日 2010-12-07 公開日 2014-07-09 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 How Mutations in tRNA Distant from the Anticodon Affect the Fidelity of Decoding. Nat.Struct.Mol.Biol., 18, 2011
4V6E	Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Zhang, W, Dunkle, J.A, Cate, J.H.D. 登録日 2009-06-28 公開日 2014-07-09 最終更新日 2014-12-10 実験手法 X-RAY DIFFRACTION (3.712 Å) 主引用文献 Structures of the ribosome in intermediate States of ratcheting. Science, 325, 2009
4V74	70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Blau, C, Bock, L.V, Schroder, G.F, Davydov, I, Fischer, N, Stark, H, Rodnina, M.V, Vaiana, A.C, Grubmuller, H. 登録日 2013-10-14 公開日 2014-07-09 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (17 Å) 主引用文献 Energy barriers and driving forces in tRNA translocation through the ribosome. Nat.Struct.Mol.Biol., 20, 2013
4V7I	Ribosome-SecY complex. 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Gumbart, J.C, Trabuco, L.G, Schreiner, E, Villa, E, Schulten, K. 登録日 2009-10-21 公開日 2014-07-09 最終更新日 2024-02-28 実験手法 ELECTRON MICROSCOPY (9.6 Å) 主引用文献 Regulation of the protein-conducting channel by a bound ribosome. Structure, 17, 2009
4V5D	Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA. 分子名称: 16S ribosomal RNA, 23S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ... 著者 Voorhees, R.M, Weixlbaumer, A, Loakes, D, Kelley, A.C, Ramakrishnan, V. 登録日 2009-03-24 公開日 2014-07-09 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Insights into substrate stabilization from snapshots of the peptidyl transferase center of the intact 70S ribosome. Nat. Struct. Mol. Biol., 16, 2009
7D63	Cryo-EM structure of 90S preribosome with inactive Utp24 (state C) 分子名称: 13 kDa ribonucleoprotein-associated protein, 18S rRNA, 40S ribosomal protein S1-A, ... 著者 Du, Y, Zhang, J, An, W, Ye, K. 登録日 2020-09-29 公開日 2021-10-06 実験手法 ELECTRON MICROSCOPY (12.3 Å) 主引用文献 Cryo-EM structure of 90S preribosome with inactive Utp24 (state C) To Be Published
7D4I	Cryo-EM structure of 90S small ribosomal precursors complex with the DEAH-box RNA helicase Dhr1 (State F) 分子名称: 13 kDa ribonucleoprotein-associated protein, 18S rRNA, 40S ribosomal protein S1-A, ... 著者 Du, Y, Zhang, J, An, W, Ye, K. 登録日 2020-09-24 公開日 2021-10-06 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Cryo-EM structure of 90S small ribosomal precursors complex with Dhr1 To Be Published
7D5T	Cryo-EM structure of 90S preribosome with inactive Utp24 (state F1) 分子名称: 13 kDa ribonucleoprotein-associated protein, 18S rRNA, 40S ribosomal protein S1-A, ... 著者 Du, Y, Zhang, J, An, W, Ye, K. 登録日 2020-09-28 公開日 2021-10-06 実験手法 ELECTRON MICROSCOPY (6 Å) 主引用文献 Cryo-EM structure of 90S preribosome with inactive Utp24 (state F1) To Be Published
7D5S	Cryo-EM structure of 90S preribosome with inactive Utp24 (state A2) 分子名称: 13 kDa ribonucleoprotein-associated protein, 18S rRNA, 40S ribosomal protein S12, ... 著者 Du, Y, Zhang, J, An, W, Ye, K. 登録日 2020-09-28 公開日 2021-10-06 実験手法 ELECTRON MICROSCOPY (4.6 Å) 主引用文献 Cryo-EM structure of 90S preribosome with inactive Utp24 (state A2) To Be Published
7DUL	Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N3''MS bound 分子名称: (1S,2S,3R,4S,6R)-4,6-diamino-3-{[(2S,3R)-3-amino-6-(aminomethyl)-3,4-dihydro-2H-pyran-2-yl]oxy}-2-hydroxycyclohexyl 3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranoside, 30S Ribosomal RNA rRNA, 30S ribosomal protein S10, ... 著者 DeMirci, H, Destan, E. 登録日 2021-01-09 公開日 2022-01-26 実験手法 X-RAY DIFFRACTION (3.62 Å) 主引用文献 Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N3''MS bound To Be Published
7DUH	Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N1''AC bound 分子名称: 30S Ribosomal RNA rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 DeMirci, H, Destan, E. 登録日 2021-01-09 公開日 2022-01-26 実験手法 X-RAY DIFFRACTION (3.75 Å) 主引用文献 Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N1''AC bound to be published
7CPU	Cryo-EM structure of 80S ribosome from mouse kidney 分子名称: 40S ribosomal protein S10, 40S ribosomal protein S11, 40S ribosomal protein S13, ... 著者 Huo, Y.G, He, X, Jiang, T, Qin, Y, Guo, X.J, Sha, J.H. 登録日 2020-08-08 公開日 2022-02-02 最終更新日 2023-01-11 実験手法 ELECTRON MICROSCOPY (2.82 Å) 主引用文献 A male germ-cell-specific ribosome controls male fertility. Nature, 612, 2022
7CPV	Cryo-EM structure of 80S ribosome from mouse testis 分子名称: 40S ribosomal protein S10, 40S ribosomal protein S11, 40S ribosomal protein S13, ... 著者 Huo, Y.G, He, X, Jiang, T, Qin, Y, Guo, X.J, Sha, J.H. 登録日 2020-08-08 公開日 2022-02-02 最終更新日 2023-01-11 実験手法 ELECTRON MICROSCOPY (3.03 Å) 主引用文献 A male germ-cell-specific ribosome controls male fertility. Nature, 612, 2022
7D80	Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Akbar, S, Bhakta, S, Sengupta, J. 登録日 2020-10-06 公開日 2021-04-07 最終更新日 2021-07-14 実験手法 ELECTRON MICROSCOPY (4.1 Å) 主引用文献 Structural insights into the interplay of protein biogenesis factors with the 70S ribosome. Structure, 29, 2021
7D6Z	Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and trigger factor 分子名称: 16S ribosomal rRNA, 23S ribosomal rRNA, 30S ribosomal protein S10, ... 著者 Akbar, S, Bhakta, S, Sengupta, J. 登録日 2020-10-02 公開日 2021-04-07 最終更新日 2021-07-14 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structural insights into the interplay of protein biogenesis factors with the 70S ribosome. Structure, 29, 2021
7DUG	Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N1''TFMS bound 分子名称: 30S Ribosomal RNA rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 DeMirci, H, Destan, E. 登録日 2021-01-09 公開日 2022-01-12 実験手法 X-RAY DIFFRACTION (3.75 Å) 主引用文献 Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N1''TFMS bound to be published
7DUI	Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N1''PyrS bound 分子名称: 30S Ribosomal RNA rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 DeMirci, H, Destan, E. 登録日 2021-01-09 公開日 2022-01-12 実験手法 X-RAY DIFFRACTION (3.62 Å) 主引用文献 Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N1''PyrS bound to be published

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