Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8IO2
DownloadVisualize
BU of 8io2 by Molmil
The Rubisco assembly intermidate of Arabidopsis thaliana Rubisco accumulation factor 1 (AtRaf1) and Rubisco large subunit (RbcL)
Descriptor: Ribulose bisphosphate carboxylase large chain, Rubisco accumulation factor 1.2, chloroplastic
Authors:Wang, R, Song, H, Zhang, W, Wang, N, Zhang, S, Shao, R.
Deposit date:2023-03-10
Release date:2023-11-01
Last modified:2023-12-20
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural insights into the functions of Raf1 and Bsd2 in hexadecameric Rubisco assembly.
Mol Plant, 16, 2023
8IOJ
DownloadVisualize
BU of 8ioj by Molmil
The Rubisco assembly intermidiate of Rubisco large subunit (RbcL) and Arabidopsis thaliana Rubisco accumulation factor 1 (AtRaf1)
Descriptor: Ribulose bisphosphate carboxylase large chain, Rubisco accumulation factor 1.2, chloroplastic
Authors:Wang, R, Song, H, Zhang, W, Wang, N, Zhang, S, Shao, R.
Deposit date:2023-03-11
Release date:2023-11-01
Last modified:2023-12-20
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structural insights into the functions of Raf1 and Bsd2 in hexadecameric Rubisco assembly.
Mol Plant, 16, 2023
4OSI
DownloadVisualize
BU of 4osi by Molmil
Crystal structure of the TAL effector dHax3 with NI RVD at 2.8 angstrom resolution
Descriptor: DNA (5'-D(*AP*GP*AP*GP*AP*GP*AP*TP*AP*AP*AP*GP*GP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*TP*AP*TP*CP*TP*CP*TP*CP*T)-3'), Hax3
Authors:Deng, D, Wu, J.P, Yan, C.Y, Pan, X.J, Yan, N.
Deposit date:2014-02-13
Release date:2014-05-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.849 Å)
Cite:Revisiting the TALE repeat
Protein Cell, 5, 2014
8IOL
DownloadVisualize
BU of 8iol by Molmil
The complex of Rubisco large subunit (RbcL)
Descriptor: Ribulose bisphosphate carboxylase large chain
Authors:Wang, R, Song, H, Zhang, W, Wang, N, Zhang, S, Shao, R.
Deposit date:2023-03-11
Release date:2023-11-01
Last modified:2023-12-20
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural insights into the functions of Raf1 and Bsd2 in hexadecameric Rubisco assembly.
Mol Plant, 16, 2023
8T6R
DownloadVisualize
BU of 8t6r by Molmil
Acinetobacter baumannii 118362 family 2A cargo-loaded encapsulin shell
Descriptor: Major membrane protein I
Authors:Andreas, M.P, Benisch, R, Giessen, T.W.
Deposit date:2023-06-17
Release date:2024-03-13
Method:ELECTRON MICROSCOPY (1.78 Å)
Cite:A widespread bacterial protein compartment sequesters and stores elemental sulfur.
Sci Adv, 10, 2024
3NBA
DownloadVisualize
BU of 3nba by Molmil
Phosphopantetheine Adenylyltranferase from Mycobacterium tuberculosis in complex with adenosine-5'-[(alpha,beta)-methyleno]triphosphate (AMPCPP)
Descriptor: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, MAGNESIUM ION, Phosphopantetheine adenylyltransferase
Authors:Wubben, T.J, Mesecar, A.D.
Deposit date:2010-06-03
Release date:2010-09-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Kinetic, thermodynamic, and structural insight into the mechanism of phosphopantetheine adenylyltransferase from Mycobacterium tuberculosis.
J.Mol.Biol., 404, 2010
1T5S
DownloadVisualize
BU of 1t5s by Molmil
Structure of the (SR)Ca2+-ATPase Ca2-E1-AMPPCP form
Descriptor: CALCIUM ION, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
Authors:Sorensen, T.L.-M, Moller, J.V, Nissen, P.
Deposit date:2004-05-05
Release date:2004-06-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Phosphoryl transfer and calcium ion occlusion in the calcium pump.
Science, 304, 2004
2C84
DownloadVisualize
BU of 2c84 by Molmil
CRYSTAL STRUCTURE OF THE SIALYLTRANSFERASE PM0188 WITH CMP
Descriptor: ALPHA-2,3/2,6-SIALYLTRANSFERASE/SIALIDASE, CYTIDINE-5'-MONOPHOSPHATE
Authors:Kim, D.U, Cho, H.S.
Deposit date:2005-12-01
Release date:2007-03-27
Last modified:2019-10-09
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structural analysis of sialyltransferase PM0188 from Pasteurella multocida complexed with donor analogue and acceptor sugar.
Bmb Rep, 41, 2008
3NCG
DownloadVisualize
BU of 3ncg by Molmil
Activated Calcium-Dependent Protein Kinase 1 from Cryptosporidium parvum (CpCDPK1) in complex with bumped kinase inhibitor NM-PP1
Descriptor: 1-(1-methylethyl)-3-(naphthalen-1-ylmethyl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine, CALCIUM ION, Calmodulin-domain protein kinase 1
Authors:Larson, E.T, Merritt, E.A, Medical Structural Genomics of Pathogenic Protozoa (MSGPP)
Deposit date:2010-06-04
Release date:2010-07-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Discovery of Potent and Selective Inhibitors of Calcium-Dependent Protein Kinase 1 (CDPK1) from C. parvum and T. gondii.
ACS Med Chem Lett, 1, 2010
1TGC
DownloadVisualize
BU of 1tgc by Molmil
ON THE DISORDERED ACTIVATION DOMAIN IN TRYPSINOGEN. CHEMICAL LABELLING AND LOW-TEMPERATURE CRYSTALLOGRAPHY
Descriptor: CALCIUM ION, TRYPSINOGEN
Authors:Walter, J, Steigemann, W, Singh, T.P, Bartunik, H, Bode, W, Huber, R.
Deposit date:1981-10-26
Release date:1982-03-04
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:On the Disordered Activation Domain in Trypsinogen. Chemical Labelling and Low-Temperature Crystallography
Acta Crystallogr.,Sect.B, 38, 1982
8QFD
DownloadVisualize
BU of 8qfd by Molmil
UFL1 E3 ligase bound 60S ribosome
Descriptor: 28S rRNA, 5.8S rRNA, 5S rRNA, ...
Authors:Makhlouf, L, Kulathu, Y, Zeqiraj, E.
Deposit date:2023-09-04
Release date:2024-02-21
Last modified:2024-04-03
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:The UFM1 E3 ligase recognizes and releases 60S ribosomes from ER translocons.
Nature, 627, 2024
2ZJA
DownloadVisualize
BU of 2zja by Molmil
Archaeal DNA helicase Hjm complexed with AMPPCP in form 2
Descriptor: PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, Putative ski2-type helicase
Authors:Oyama, T, Oka, H, Fujikane, R, Ishino, Y, Morikawa, K.
Deposit date:2008-02-29
Release date:2009-02-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Atomic structures and functional implications of the archaeal RecQ-like helicase Hjm
Bmc Struct.Biol., 9, 2009
2I0C
DownloadVisualize
BU of 2i0c by Molmil
Crystal structure of the GluR6 ligand binding core dimer crosslinked by disulfide bonds between Y490C and L752C at 2.25 Angstroms Resolution
Descriptor: GLUTAMIC ACID, Glutamate receptor, ionotropic kainate 2
Authors:Mayer, M.L.
Deposit date:2006-08-10
Release date:2006-11-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Conformational restriction blocks glutamate receptor desensitization.
Nat.Struct.Mol.Biol., 13, 2006
2I0N
DownloadVisualize
BU of 2i0n by Molmil
Structure of Dictyostelium discoideum Myosin VII SH3 domain with adjacent proline rich region
Descriptor: Class VII unconventional myosin
Authors:Wang, Q, Deloia, M.A, Kang, Y, Litchke, C, Titus, M.A, Walters, K.J.
Deposit date:2006-08-10
Release date:2007-01-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The SH3 domain of a M7 interacts with its C-terminal proline-rich region.
Protein Sci., 16, 2007
4PRX
DownloadVisualize
BU of 4prx by Molmil
E. coli GyrB 43-kDa N-terminal fragment in complex with ADP+Pi
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, GyrB, ...
Authors:Stanger, F.V, Schirmer, T.
Deposit date:2014-03-06
Release date:2014-09-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the N-Terminal Gyrase B Fragment in Complex with ADPPi Reveals Rigid-Body Motion Induced by ATP Hydrolysis
Plos One, 9, 2014
1FQ1
DownloadVisualize
BU of 1fq1 by Molmil
CRYSTAL STRUCTURE OF KINASE ASSOCIATED PHOSPHATASE (KAP) IN COMPLEX WITH PHOSPHO-CDK2
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CELL DIVISION PROTEIN KINASE 2, CYCLIN-DEPENDENT KINASE INHIBITOR 3, ...
Authors:Song, H, Hanlon, N, Brown, N.R, Noble, M.E.M, Johnson, L.N, Barford, D.
Deposit date:2000-09-01
Release date:2001-05-09
Last modified:2018-03-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:Phosphoprotein-protein interactions revealed by the crystal structure of kinase-associated phosphatase in complex with phosphoCDK2.
Mol.Cell, 7, 2001
4OST
DownloadVisualize
BU of 4ost by Molmil
Crystal structure of the S505C mutant of TAL effector dHax3
Descriptor: DNA (5'-D(*AP*GP*AP*GP*AP*GP*AP*TP*AP*AP*AP*GP*GP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*TP*AP*TP*CP*TP*CP*TP*CP*T)-3'), Hax3
Authors:Deng, D, Wu, J.P, Yan, C.Y, Pan, X.J, Yan, N.
Deposit date:2014-02-13
Release date:2014-05-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.996 Å)
Cite:Revisiting the TALE repeat
Protein Cell, 5, 2014
4OTI
DownloadVisualize
BU of 4oti by Molmil
Crystal Structure of PRK1 Catalytic Domain in Complex with Tofacitinib
Descriptor: 3-{(3R,4R)-4-methyl-3-[methyl(7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]piperidin-1-yl}-3-oxopropanenitrile, Serine/threonine-protein kinase N1
Authors:Chamberlain, P.P, Delker, S, Pagarigan, B, Mahmoudi, A, Jackson, P, Abbassian, M, Muir, J, Raheja, N, Cathers, B.
Deposit date:2014-02-13
Release date:2014-08-27
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Crystal Structures of PRK1 in Complex with the Clinical Compounds Lestaurtinib and Tofacitinib Reveal Ligand Induced Conformational Changes.
Plos One, 9, 2014
6GBD
DownloadVisualize
BU of 6gbd by Molmil
Murine Protein Tyrosine Phosphatase PTPN13 PDZ3 Domain
Descriptor: PDZ3
Authors:Kock, G, Stoll, R.
Deposit date:2018-04-13
Release date:2018-12-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Molecular Basis of Class III Ligand Recognition by PDZ3 in Murine Protein Tyrosine Phosphatase PTPN13.
J. Mol. Biol., 430, 2018
3AMQ
DownloadVisualize
BU of 3amq by Molmil
E134C-Cellobiose co-crystal of cellulase 12A from thermotoga maritima
Descriptor: Endo-1,4-beta-glucanase, beta-D-glucopyranose, beta-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Cheng, Y.-S, Ko, T.-P, Liu, J.-R, Guo, R.-T.
Deposit date:2010-08-20
Release date:2011-03-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure and substrate-binding mode of cellulase 12A from Thermotoga maritima
Proteins, 79, 2011
3AMN
DownloadVisualize
BU of 3amn by Molmil
E134C-Cellobiose complex of cellulase 12A from thermotoga maritima
Descriptor: Endo-1,4-beta-glucanase, beta-D-glucopyranose-(1-4)-alpha-D-glucopyranose, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
Authors:Cheng, Y.-S, Ko, T.-P, Liu, J.-R, Guo, R.-T.
Deposit date:2010-08-20
Release date:2011-03-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Crystal structure and substrate-binding mode of cellulase 12A from Thermotoga maritima
Proteins, 79, 2011
4MRF
DownloadVisualize
BU of 4mrf by Molmil
Crystal structure of the murine cd44 hyaluronan binding domain complex with a small molecule
Descriptor: 1,2,3,4-tetrahydroisoquinoline, CD44 antigen, DIMETHYL SULFOXIDE, ...
Authors:Liu, L.K, Finzel, B.
Deposit date:2013-09-17
Release date:2014-04-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Fragment-Based Identification of an Inducible Binding Site on Cell Surface Receptor CD44 for the Design of Protein-Carbohydrate Interaction Inhibitors.
J.Med.Chem., 57, 2014
2ARI
DownloadVisualize
BU of 2ari by Molmil
Solution structure of micelle-bound fusion domain of HIV-1 gp41
Descriptor: Envelope polyprotein GP160
Authors:Jaroniec, C.P, Kaufman, J.D, Stahl, S.J, Viard, M, Blumenthal, R, Wingfield, P.T, Bax, A.
Deposit date:2005-08-19
Release date:2005-12-20
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure and Dynamics of Micelle-Associated Human Immunodeficiency Virus gp41 Fusion Domain.
Biochemistry, 44, 2005
6R4C
DownloadVisualize
BU of 6r4c by Molmil
Aurora-A in complex with shape-diverse fragment 57
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Aurora kinase A, CHLORIDE ION, ...
Authors:Bayliss, R, McIntyre, P.J.
Deposit date:2019-03-22
Release date:2019-05-01
Last modified:2019-07-10
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Construction of a Shape-Diverse Fragment Set: Design, Synthesis and Screen against Aurora-A Kinase.
Chemistry, 25, 2019
1GFP
DownloadVisualize
BU of 1gfp by Molmil
OMPF PORIN (MUTANT R42C)
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, MATRIX PORIN OUTER MEMBRANE PROTEIN F
Authors:Lou, K.-L, Schirmer, T.
Deposit date:1996-05-08
Release date:1996-12-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and functional characterization of OmpF porin mutants selected for larger pore size. I. Crystallographic analysis.
J.Biol.Chem., 271, 1996

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon