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6PPN
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BU of 6ppn by Molmil
Structure of S. pombe Lsm2-8 with unprocessed U6 snRNA
Descriptor: Mimic of unprocessed U6 snRNA, Probable U6 snRNA-associated Sm-like protein LSm3, Probable U6 snRNA-associated Sm-like protein LSm4, ...
Authors:Montemayor, E.J, Butcher, S.E.
Deposit date:2019-07-08
Release date:2020-06-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Molecular basis for the distinct cellular functions of the Lsm1-7 and Lsm2-8 complexes.
Rna, 26, 2020
6PPQ
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BU of 6ppq by Molmil
Structure of S. pombe Lsm1-7 with RNA, polyuridine with 3' adenosine
Descriptor: Probable U6 snRNA-associated Sm-like protein LSm3, Probable U6 snRNA-associated Sm-like protein LSm4, RNA (5'-R(*UP*UP*UP*UP*UP*A)-3'), ...
Authors:Montemayor, E.J, Butcher, S.E.
Deposit date:2019-07-08
Release date:2020-06-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Molecular basis for the distinct cellular functions of the Lsm1-7 and Lsm2-8 complexes.
Rna, 26, 2020
6PPV
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BU of 6ppv by Molmil
Structure of S. pombe Lsm1-7 with RNA, polyuridine with 3' guanosine
Descriptor: Probable U6 snRNA-associated Sm-like protein LSm3, Probable U6 snRNA-associated Sm-like protein LSm4, RNA (5'-R(*AP*UP*UP*UP*UP*G)-3'), ...
Authors:Montemayor, E.J, Butcher, S.E.
Deposit date:2019-07-08
Release date:2020-06-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Molecular basis for the distinct cellular functions of the Lsm1-7 and Lsm2-8 complexes.
Rna, 26, 2020
6PPP
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BU of 6ppp by Molmil
Structure of S. pombe Lsm2-8 with processed U6 snRNA
Descriptor: Mimic of processed U6 snRNA, Probable U6 snRNA-associated Sm-like protein LSm3, Probable U6 snRNA-associated Sm-like protein LSm4, ...
Authors:Montemayor, E.J, Butcher, S.E.
Deposit date:2019-07-08
Release date:2020-06-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Molecular basis for the distinct cellular functions of the Lsm1-7 and Lsm2-8 complexes.
Rna, 26, 2020
7B7D
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BU of 7b7d by Molmil
Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs
Descriptor: 18S rRNA, 25S rRNA, 40S ribosomal protein S0-A, ...
Authors:Ranjan, N, Pochopien, A.A, Wu, C.C, Beckert, B, Blanchet, S, Green, R, Rodnina, M.V, Wilson, D.N.
Deposit date:2020-12-10
Release date:2021-03-10
Last modified:2025-04-09
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:eEF3 promotes late stages of tRNA translocation including E-tRNA release from the ribosome
To Be Published
6AH3
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BU of 6ah3 by Molmil
Cryo-EM structure of yeast Ribonuclease P with pre-tRNA substrate
Descriptor: MAGNESIUM ION, RNases MRP/P 32.9 kDa subunit, Ribonuclease P RNA, ...
Authors:Lan, P, Tan, M, Wu, J, Lei, M.
Deposit date:2018-08-16
Release date:2018-10-17
Last modified:2025-04-09
Method:ELECTRON MICROSCOPY (3.48 Å)
Cite:Structural insight into precursor tRNA processing by yeast ribonuclease P.
Science, 362, 2018
9O68
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BU of 9o68 by Molmil
Crystal Structure of Tryptophanyl-tRNA synthetase from Klebsiella aerogenes (tryptophan bound)
Descriptor: CHLORIDE ION, SULFATE ION, TETRAETHYLENE GLYCOL, ...
Authors:Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2025-04-11
Release date:2025-04-23
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal Structure of Tryptophanyl-tRNA synthetase from Klebsiella aerogenes (tryptophan bound)
To be published
9LOT
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BU of 9lot by Molmil
Crystal structure of Escherichia coli trptophanyl-tRNA synthetase in complex with N-piperidine ibrutinib
Descriptor: 3-(4-phenoxyphenyl)-1-piperidin-4-yl-pyrazolo[3,4-d]pyrimidin-4-amine, CHLORZOXAZONE, SULFATE ION, ...
Authors:Peng, X, Chen, B, Xia, K, Zhou, H.
Deposit date:2025-01-23
Release date:2025-05-07
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:The lineage-specific tRNA recognition mechanism of bacterial trptophanyl-tRNA synthetase and its implications for inhibitor discover
To Be Published
9LPD
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BU of 9lpd by Molmil
Crystal structure of Escherichia coli trptophanyl-tRNA synthetase in complex with tirabrutinib
Descriptor: CHLORZOXAZONE, SULFATE ION, TRYPTOPHANYL-5'AMP, ...
Authors:Peng, X, Chen, B, Xia, K, Zhou, H.
Deposit date:2025-01-24
Release date:2025-05-07
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The lineage-specific tRNA recognition mechanism of bacterial trptophanyl-tRNA synthetase and its implications for inhibitor discover
To Be Published
9O66
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BU of 9o66 by Molmil
Crystal Structure of Tryptophanyl-tRNA synthetase from Klebsiella aerogenes
Descriptor: CALCIUM ION, IMIDAZOLE, Tryptophan--tRNA ligase
Authors:Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2025-04-11
Release date:2025-04-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of Tryptophanyl-tRNA synthetase from Klebsiella aerogenes
To be published
9M5N
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BU of 9m5n by Molmil
Plasmodium vivax aspartyl-tRNA synthetase in complex with aspartyl-adenylate (Asp-AMP) Complex.
Descriptor: ACETATE ION, ASPARTYL-ADENOSINE-5'-MONOPHOSPHATE, GLYCEROL, ...
Authors:Sharma, V.K, Manickam, Y, Sharma, A, Bagale, S, Pradeepkumar, P.I.
Deposit date:2025-03-06
Release date:2025-06-04
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Natural product-mediated reaction hijacking mechanism validates Plasmodium aspartyl-tRNA synthetase as an antimalarial drug target
To Be Published
9M5O
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BU of 9m5o by Molmil
Plasmodium vivax aspartyl-tRNA synthetase in complex with aspartyl sulfamoyl adenosine (Asp-AMS) Complex
Descriptor: 5'-O-(L-alpha-aspartylsulfamoyl)adenosine, MAGNESIUM ION, aspartate--tRNA ligase
Authors:Sharma, V.K, Manickam, Y, Sharma, A, Bagale, S, Pradeepkumar, P.I.
Deposit date:2025-03-06
Release date:2025-06-04
Method:X-RAY DIFFRACTION (1.839 Å)
Cite:Natural product-mediated reaction hijacking mechanism validates Plasmodium aspartyl-tRNA synthetase as an antimalarial drug target
To Be Published
5LMU
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BU of 5lmu by Molmil
Structure of bacterial 30S-IF3-mRNA-tRNA translation pre-initiation complex, closed form (state-4)
Descriptor: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Hussain, T, Llacer, J.L, Wimberly, B.T, Ramakrishnan, V.
Deposit date:2016-08-01
Release date:2016-10-05
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Large-Scale Movements of IF3 and tRNA during Bacterial Translation Initiation.
Cell, 167, 2016
9M5M
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BU of 9m5m by Molmil
Crystal structure of Plasmodium vivax aspartyl-tRNA synthetase (PvDRS)
Descriptor: 1,2-ETHANEDIOL, SULFATE ION, aspartate--tRNA ligase
Authors:Sharma, V.K, Manickam, Y, Bagale, S, Pradeepkumar, P.I, Sharma, A.
Deposit date:2025-03-06
Release date:2025-06-04
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Natural product-mediated reaction hijacking mechanism validates Plasmodium aspartyl-tRNA synthetase as an antimalarial drug target
To Be Published
5LMV
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BU of 5lmv by Molmil
Structure of bacterial 30S-IF1-IF2-IF3-mRNA-tRNA translation pre-initiation complex(state-III)
Descriptor: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Hussain, T, Llacer, J.L, Wimberly, B.T, Ramakrishnan, V.
Deposit date:2016-08-01
Release date:2016-10-05
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:Large-Scale Movements of IF3 and tRNA during Bacterial Translation Initiation.
Cell, 167, 2016
5LMT
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BU of 5lmt by Molmil
Structure of bacterial 30S-IF1-IF3-mRNA-tRNA translation pre-initiation complex(state-3)
Descriptor: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Hussain, T, Llacer, J.L, Wimberly, B.T, Ramakrishnan, V.
Deposit date:2016-08-01
Release date:2016-10-05
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (4.15 Å)
Cite:Large-Scale Movements of IF3 and tRNA during Bacterial Translation Initiation.
Cell, 167, 2016
5LMR
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BU of 5lmr by Molmil
Structure of bacterial 30S-IF1-IF3-mRNA-tRNA translation pre-initiation complex(state-2B)
Descriptor: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Hussain, T, Llacer, J.L, Wimberly, B.T, Ramakrishnan, V.
Deposit date:2016-08-01
Release date:2016-10-05
Last modified:2025-04-09
Method:ELECTRON MICROSCOPY (4.45 Å)
Cite:Large-Scale Movements of IF3 and tRNA during Bacterial Translation Initiation.
Cell, 167, 2016
5LMS
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BU of 5lms by Molmil
Structure of bacterial 30S-IF1-IF3-mRNA-tRNA translation pre-initiation complex(state-2C)
Descriptor: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Hussain, T, Llacer, J.L, Wimberly, B.T, Ramakrishnan, V.
Deposit date:2016-08-01
Release date:2016-10-05
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (5.1 Å)
Cite:Large-Scale Movements of IF3 and tRNA during Bacterial Translation Initiation.
Cell, 167, 2016
5LMQ
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BU of 5lmq by Molmil
Structure of bacterial 30S-IF1-IF3-mRNA-tRNA translation pre-initiation complex, open form (state-2A)
Descriptor: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Hussain, T, Llacer, J.L, Wimberly, B.T, Ramakrishnan, V.
Deposit date:2016-08-01
Release date:2016-10-05
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Large-Scale Movements of IF3 and tRNA during Bacterial Translation Initiation.
Cell, 167, 2016
1LS2
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BU of 1ls2 by Molmil
Fitting of EF-Tu and tRNA in the Low Resolution Cryo-EM Map of an EF-Tu Ternary Complex (GDP and Kirromycin) Bound to E. coli 70S Ribosome
Descriptor: Elongation Factor Tu, Phenylalanine transfer RNA
Authors:Valle, M, Sengupta, J, Swami, N.K, Grassucci, R.A, Burkhardt, N, Nierhaus, K.H, Agrawal, R.K, Frank, J.
Deposit date:2002-05-16
Release date:2002-06-26
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (16.799999 Å)
Cite:Cryo-EM reveals an active role for aminoacyl-tRNA in the accommodation process.
EMBO J., 21, 2002
4OO1
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BU of 4oo1 by Molmil
Structure of an Rrp6-RNA exosome complex bound to poly(A) RNA
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Exosome complex component CSL4, ...
Authors:Lima, C.D, Wasmuth, E.V.
Deposit date:2014-01-29
Release date:2014-07-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structure of an Rrp6-RNA exosome complex bound to poly(A) RNA.
Nature, 511, 2014
5ZEB
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BU of 5zeb by Molmil
M. Smegmatis P/P state 70S ribosome structure
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Mishra, S, Ahmed, T, Tyagi, A, Shi, J, Bhushan, S.
Deposit date:2018-02-27
Release date:2018-09-26
Last modified:2025-04-09
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structures of Mycobacterium smegmatis 70S ribosomes in complex with HPF, tmRNA, and P-tRNA.
Sci Rep, 8, 2018
6SPG
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BU of 6spg by Molmil
Pseudomonas aeruginosa 70s ribosome from a clinical isolate
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Halfon, Y, Jimenez-Fernande, A, La Ros, R, Espinos, R, Krogh Johansen, H, Matzov, D, Eyal, Z, Bashan, A, Zimmerman, E, Belousoff, M, Molin, S, Yonath, A.
Deposit date:2019-09-01
Release date:2019-10-16
Last modified:2025-07-09
Method:ELECTRON MICROSCOPY (3.34 Å)
Cite:Structure ofPseudomonas aeruginosaribosomes from an aminoglycoside-resistant clinical isolate.
Proc.Natl.Acad.Sci.USA, 116, 2019
5ZEU
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BU of 5zeu by Molmil
M. smegmatis P/P state 30S ribosomal subunit
Descriptor: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Mishra, S, Ahmed, T, Tyagi, A, Shi, J, Bhushan, S.
Deposit date:2018-02-28
Release date:2018-09-26
Last modified:2025-04-09
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structures of Mycobacterium smegmatis 70S ribosomes in complex with HPF, tmRNA, and P-tRNA.
Sci Rep, 8, 2018
6PMO
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BU of 6pmo by Molmil
Co-crystal structure of the Geobacillus kaustophilus glyQ T-box riboswitch discriminator domain in complex with tRNA-Gly
Descriptor: IRIDIUM ION, MAGNESIUM ION, T-box riboswitch discriminator, ...
Authors:Li, S, Zhang, J.
Deposit date:2019-07-02
Release date:2019-11-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.65703368 Å)
Cite:Structural basis of amino acid surveillance by higher-order tRNA-mRNA interactions.
Nat.Struct.Mol.Biol., 26, 2019

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