Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3VOQ
DownloadVisualize
BU of 3voq by Molmil
Crystal structure of the pleckstrin homology domain of human Sin1, a TORC2 subunit
Descriptor: Target of rapamycin complex 2 subunit MAPKAP1
Authors:Pan, D, Matsuura, Y.
Deposit date:2012-01-31
Release date:2012-04-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of the pleckstrin homology domain of Saccharomyces cerevisiae Avo1 and its human orthologue Sin1, an essential subunit of TOR complex 2
Acta Crystallogr.,Sect.F, 68, 2012
6ULC
DownloadVisualize
BU of 6ulc by Molmil
Structure of full-length, fully glycosylated, non-modified HIV-1 gp160 bound to PG16 Fab at a nominal resolution of 4.6 Angstrom
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Pan, J, Chen, B, Harrison, S.C.
Deposit date:2019-10-07
Release date:2020-04-29
Last modified:2020-09-09
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Cryo-EM Structure of Full-length HIV-1 Env Bound With the Fab of Antibody PG16.
J.Mol.Biol., 432, 2020
3W15
DownloadVisualize
BU of 3w15 by Molmil
Structure of peroxisomal targeting signal 2 (PTS2) of Saccharomyces cerevisiae 3-ketoacyl-CoA thiolase in complex with Pex7p and Pex21p
Descriptor: 3-ketoacyl-CoA thiolase, peroxisomal, Maltose-binding periplasmic protein, ...
Authors:Pan, D, Nakatsu, T, Kato, H.
Deposit date:2012-11-06
Release date:2013-07-03
Last modified:2017-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of peroxisomal targeting signal-2 bound to its receptor complex Pex7p-Pex21p
Nat.Struct.Mol.Biol., 20, 2013
6VG7
DownloadVisualize
BU of 6vg7 by Molmil
De novo designed Rossmann fold protein ROS2_49223
Descriptor: De novo designed protein RO2_25
Authors:Pan, X, Zhang, Y, Kelly, M, Kortemme, T.
Deposit date:2020-01-07
Release date:2020-08-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Expanding the space of protein geometries by computational design of de novo fold families.
Science, 369, 2020
6VGA
DownloadVisualize
BU of 6vga by Molmil
De novo designed Rossmann fold protein ROS2_835
Descriptor: De novo designed protein RO2_1
Authors:Pan, X, Zhang, Y, Kelly, M, Kortemme, T.
Deposit date:2020-01-07
Release date:2020-08-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Expanding the space of protein geometries by computational design of de novo fold families.
Science, 369, 2020
6VGB
DownloadVisualize
BU of 6vgb by Molmil
De novo designed Rossmann fold protein ROS2_36830
Descriptor: De novo designed protein RO2_20
Authors:Pan, X, Zhang, Y, Kelly, M, Kortemme, T.
Deposit date:2020-01-07
Release date:2020-08-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Expanding the space of protein geometries by computational design of de novo fold families.
Science, 369, 2020
409D
DownloadVisualize
BU of 409d by Molmil
CRYSTAL STRUCTURE OF AN RNA R(CCCIUGGG) WITH THREE INDEPENDENT DUPLEXES INCORPORATING TANDEM I.U WOBBLES
Descriptor: RNA (5'-R(*CP*CP*CP*IP*UP*GP*GP*G)-3')
Authors:Pan, B, Mitra, S.N, Sun, L, Hart, D, Sundaralingam, M.
Deposit date:1998-06-26
Release date:1999-01-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of an RNA octamer duplex r(CCCIUGGG)2 incorporating tandem I.U wobbles.
Nucleic Acids Res., 26, 1998
405D
DownloadVisualize
BU of 405d by Molmil
STRUCTURE OF A 16-MER RNA DUPLEX R(GCAGACUUAAAUCUGC)2 WITH WOBBLE LIKE A.C MISMATCHES
Descriptor: RNA (5'-R(*GP*CP*AP*GP*AP*CP*UP*UP*AP*AP*AP*UP*CP*UP*GP*C)-3')
Authors:Pan, B, Sundaralingam, M, Mitra, S.N.
Deposit date:1998-06-17
Release date:1999-01-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of a 16-mer RNA duplex r(GCAGACUUAAAUCUGC)2 with wobble C.A+ mismatches.
J.Mol.Biol., 283, 1998
2AWE
DownloadVisualize
BU of 2awe by Molmil
Base-Tetrad Swapping Results in Dimerization of RNA Quadruplexes: Implications for Formation of I-Motif RNA Octaplex
Descriptor: 5'-R(*UP*(BGM)P*GP*UP*GP*U)-3', POTASSIUM ION, STRONTIUM ION
Authors:Pan, B, Shi, K, Sundaralingam, M.
Deposit date:2005-08-31
Release date:2006-02-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Base-tetrad swapping results in dimerization of RNA quadruplexes: implications for formation of the i-motif RNA octaplex.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2B01
DownloadVisualize
BU of 2b01 by Molmil
Crystal Structure of Porcine Pancreatic Phospholipase A2 in Complex with Taurochenodeoxycholate
Descriptor: CALCIUM ION, CHLORIDE ION, Phospholipase A2, ...
Authors:Pan, Y.H, Bahnson, B.J, Jain, M.K.
Deposit date:2005-09-12
Release date:2006-11-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for bile salt inhibition of pancreatic phospholipase A2.
J.Mol.Biol., 369, 2007
2AZZ
DownloadVisualize
BU of 2azz by Molmil
Crystal Structure of Porcine Pancreatic Phospholipase A2 in Complex with Taurocholate
Descriptor: CALCIUM ION, CHLORIDE ION, Phospholipase A2, ...
Authors:Pan, Y.H, Bahnson, B.J, Jain, M.K.
Deposit date:2005-09-12
Release date:2006-11-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for bile salt inhibition of pancreatic phospholipase A2.
J.Mol.Biol., 369, 2007
2B03
DownloadVisualize
BU of 2b03 by Molmil
Crystal Structure of Porcine Pancreatic Phospholipase A2 in Complex with Taurochenodeoxycholate
Descriptor: CALCIUM ION, Phospholipase A2, major isoenzyme, ...
Authors:Pan, Y.H, Bahnson, B.J, Jain, M.K.
Deposit date:2005-09-12
Release date:2006-11-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for bile salt inhibition of pancreatic phospholipase A2.
J.Mol.Biol., 369, 2007
2B00
DownloadVisualize
BU of 2b00 by Molmil
Crystal Structure of Porcine Pancreatic Phospholipase A2 in Complex with Glycocholate
Descriptor: CALCIUM ION, GLYCOCHOLIC ACID, Phospholipase A2, ...
Authors:Pan, Y.H, Bahnson, B.J, Jain, M.K.
Deposit date:2005-09-12
Release date:2006-11-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural basis for bile salt inhibition of pancreatic phospholipase A2.
J.Mol.Biol., 369, 2007
2B04
DownloadVisualize
BU of 2b04 by Molmil
Crystal Structure of Porcine Pancreatic Phospholipase A2 in Complex with Glycochenodeoxycholate
Descriptor: CALCIUM ION, CHLORIDE ION, GLYCOCHENODEOXYCHOLIC ACID, ...
Authors:Pan, Y.H, Bahnson, B.J, Jain, M.K.
Deposit date:2005-09-12
Release date:2006-11-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for bile salt inhibition of pancreatic phospholipase A2.
J.Mol.Biol., 369, 2007
3JYN
DownloadVisualize
BU of 3jyn by Molmil
Crystal structures of Pseudomonas syringae pv. Tomato DC3000 quinone oxidoreductase complexed with NADPH
Descriptor: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Quinone oxidoreductase
Authors:Pan, X, Zhang, H, Gao, Y, Li, M, Chang, W.
Deposit date:2009-09-22
Release date:2010-01-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Crystal structures of Pseudomonas syringae pv. tomato DC3000 quinone oxidoreductase and its complex with NADPH
Biochem.Biophys.Res.Commun., 390, 2009
3K35
DownloadVisualize
BU of 3k35 by Molmil
Crystal Structure of Human SIRT6
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, NAD-dependent deacetylase sirtuin-6, SULFATE ION, ...
Authors:Pan, P.W, Dong, A, Qiu, W, Loppnau, P, Wang, J, Ravichandran, M, Bochkarev, A, Bountra, C, Weigelt, J, Arrowsmith, C.H, Min, J, Edwards, A.M, Structural Genomics Consortium (SGC)
Deposit date:2009-10-01
Release date:2009-12-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and biochemical functions of SIRT6.
J.Biol.Chem., 286, 2011
3JYL
DownloadVisualize
BU of 3jyl by Molmil
Crystal structures of Pseudomonas syringae pv. Tomato DC3000 quinone oxidoreductase
Descriptor: Quinone oxidoreductase
Authors:Pan, X, Zhang, H, Gao, Y, Li, M, Chang, W.
Deposit date:2009-09-22
Release date:2010-01-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures of Pseudomonas syringae pv. tomato DC3000 quinone oxidoreductase and its complex with NADPH
Biochem.Biophys.Res.Commun., 390, 2009
4JO1
DownloadVisualize
BU of 4jo1 by Molmil
Crystal structure of rabbit mAb R56 Fab in complex with V3 crown of HIV-1 JR-FL gp120
Descriptor: CALCIUM ION, gp120, monoclonal anti-HIV-1 gp120 V3 antibody R56 heavy chain, ...
Authors:Pan, R.M, Kong, X.P.
Deposit date:2013-03-16
Release date:2013-07-31
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.033 Å)
Cite:Rabbit Anti-HIV-1 Monoclonal Antibodies Raised by Immunization Can Mimic the Antigen-Binding Modes of Antibodies Derived from HIV-1-Infected Humans.
J.Virol., 87, 2013
4JO2
DownloadVisualize
BU of 4jo2 by Molmil
Crystal structure of rabbit mAb R56 Fab in complex with V3 crown of HIV-1 Consensus A gp120
Descriptor: CALCIUM ION, gp120, monoclonal anti-HIV-1 gp120 V3 antibody R56 heavy chain, ...
Authors:Pan, R.M, Kong, X.P.
Deposit date:2013-03-16
Release date:2013-07-31
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Rabbit Anti-HIV-1 Monoclonal Antibodies Raised by Immunization Can Mimic the Antigen-Binding Modes of Antibodies Derived from HIV-1-Infected Humans.
J.Virol., 87, 2013
4JO3
DownloadVisualize
BU of 4jo3 by Molmil
Crystal structure of rabbit mAb R20 Fab in complex with V3 C-terminus of HIV-1 Consensus B gp120
Descriptor: SULFATE ION, gp120, monoclonal anti-HIV-1 gp120 V3 antibody R20 heavy chain, ...
Authors:Pan, R.M, Kong, X.P.
Deposit date:2013-03-16
Release date:2013-07-31
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Rabbit Anti-HIV-1 Monoclonal Antibodies Raised by Immunization Can Mimic the Antigen-Binding Modes of Antibodies Derived from HIV-1-Infected Humans.
J.Virol., 87, 2013
4JO4
DownloadVisualize
BU of 4jo4 by Molmil
Crystal structure of rabbit mAb R20 Fab
Descriptor: PENTAETHYLENE GLYCOL, SULFATE ION, monoclonal anti-HIV-1 gp120 V3 antibody R20 heavy chain, ...
Authors:Pan, R.M, Kong, X.P.
Deposit date:2013-03-16
Release date:2013-07-31
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Rabbit Anti-HIV-1 Monoclonal Antibodies Raised by Immunization Can Mimic the Antigen-Binding Modes of Antibodies Derived from HIV-1-Infected Humans.
J.Virol., 87, 2013
4ZTO
DownloadVisualize
BU of 4zto by Molmil
Fab/epitope complex structure of rabbit monoclonal antibody R53 targeting an epitope in HIV-1 gp120 C4 region
Descriptor: Epitope of rabbit monoclonal antibody R53, RABBIT MONOCLONAL ANTIBODY R53 FAB HEAVY CHAIN, RABBIT MONOCLONAL ANTIBODY R53 FAB LIGHT CHAIN
Authors:Pan, R, Kong, X.-P.
Deposit date:2015-05-14
Release date:2015-08-19
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural analysis of a novel rabbit monoclonal antibody R53 targeting an epitope in HIV-1 gp120 C4 region critical for receptor and co-receptor binding.
Emerg Microbes Infect, 4, 2015
4ZTP
DownloadVisualize
BU of 4ztp by Molmil
Fab structure of rabbit monoclonal antibody R53 targeting an epitope in HIV-1 gp120 C4 region
Descriptor: Heavy chain of Fab fragment of rabbit monoclonal antibody R53, Light chain of Fab fragment of rabbit monoclonal antibody R53
Authors:Pan, R, Kong, X.-P.
Deposit date:2015-05-14
Release date:2015-08-19
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Structural analysis of a novel rabbit monoclonal antibody R53 targeting an epitope in HIV-1 gp120 C4 region critical for receptor and co-receptor binding.
Emerg Microbes Infect, 4, 2015
5XHR
DownloadVisualize
BU of 5xhr by Molmil
Crystal structure of P99 beta-lactamase in complex with a penicillin derivative MPC-1
Descriptor: (2~{R},4~{S})-5,5-dimethyl-2-[(2~{S},3~{R})-3-oxidanyl-1-oxidanylidene-5-thiophen-2-yl-pentan-2-yl]-1,3-thiazolidine-4-carboxylic acid, Beta-lactamase
Authors:Pan, X, Zhao, Y.
Deposit date:2017-04-24
Release date:2017-09-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Modified Penicillin Molecule with Carbapenem-Like Stereochemistry Specifically Inhibits Class C beta-Lactamases
Antimicrob. Agents Chemother., 61, 2017
5Y63
DownloadVisualize
BU of 5y63 by Molmil
Crystal structure of Enterococcus faecalis AhpC
Descriptor: Alkyl hydroperoxide reductase, C subunit
Authors:Pan, A, Balakrishna, A.M, Grueber, G.
Deposit date:2017-08-10
Release date:2017-12-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.87 Å)
Cite:Atomic structure and enzymatic insights into the vancomycin-resistant Enterococcus faecalis (V583) alkylhydroperoxide reductase subunit C
Free Radic. Biol. Med., 115, 2017

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon