PDB: 316 resultsInfo pagesStatus searchChemie searchBIRD

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3WUU	Structure basis of inactivating cell abscission with chimera peptide 1 Descriptor: Centrosomal protein of 55 kDa, TEX-14 Authors: Kim, H.J, Matsuura, A, Lee, H.H. Deposit date: 2014-05-05 Release date: 2015-07-15 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (2.904 Å) Cite: Structural and biochemical insights into the role of testis-expressed gene 14 (TEX14) in forming the stable intercellular bridges of germ cells. Proc.Natl.Acad.Sci.USA, 112, 2015
3X2Y	Crystal structure of metallo-beta-lactamase H8A from Thermotoga maritima Descriptor: NICKEL (II) ION, UPF0173 metal-dependent hydrolase TM_1162 Authors: Choi, H.J, Kim, H.J, Matsuura, A, Mikami, B, Yoon, H.J, Lee, H.H. Deposit date: 2015-01-07 Release date: 2016-02-17 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.67 Å) Cite: Crystal structure of metallo-beta-lactamase H8A from Thermotoga maritima To be Published
3X30	Crystal structure of metallo-beta-lactamase from Thermotoga maritima Descriptor: MANGANESE (II) ION, NICKEL (II) ION, UPF0173 metal-dependent hydrolase TM_1162 Authors: Choi, H.J, Kim, H.J, Matsuura, A, Mikami, B, Yoon, H.J, Lee, H.H. Deposit date: 2015-01-07 Release date: 2016-02-17 Method: X-RAY DIFFRACTION (1.921 Å) Cite: Crystal structure of metallo-beta-lactamase from Thermotoga maritima To be Published
3X2X	Crystal structure of metallo-beta-lactamase H48A from Thermotoga maritima Descriptor: MANGANESE (II) ION, UPF0173 metal-dependent hydrolase TM_1162 Authors: Choi, H.J, Kim, H.J, Matsuura, A, Mikami, B, Yoon, H.J, Lee, H.H. Deposit date: 2015-01-07 Release date: 2016-02-17 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (3.42 Å) Cite: Crystal structure of metallo-beta-lactamase H48A from Thermotoga maritima To be Published
3X3U	Crystal structure of wild-type of E. coli CutA1 Descriptor: Divalent-cation tolerance protein CutA Authors: Tanaka, T, Matsuura, Y, Yutani, K. Deposit date: 2015-02-12 Release date: 2015-04-15 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.09 Å) Cite: Crystal structure of wild-type of E. coli CutA1 To be Published
3WYF	Crystal structure of Xpo1p-Yrb2p-Gsp1p-GTP complex Descriptor: Exportin-1, GUANOSINE-5'-TRIPHOSPHATE, Gsp1p, ... Authors: Koyama, M, Shirai, N, Matsuura, Y. Deposit date: 2014-08-26 Release date: 2014-11-12 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.22 Å) Cite: Structural insights into how yrb2p accelerates the assembly of the xpo1p nuclear export complex Cell Rep, 9, 2014
3X2Z	Crystal structure of metallo-beta-lactamase in complex with nickel from Thermotoga maritima Descriptor: NICKEL (II) ION, UPF0173 metal-dependent hydrolase TM_1162 Authors: Choi, H.J, Kim, H.J, Matsuura, A, Mikami, B, Yoon, H.J, Lee, H.H. Deposit date: 2015-01-07 Release date: 2016-02-17 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.33 Å) Cite: Crystal structure of metallo-beta-lactamase in complex with nickel from Thermotoga maritima To be Published
3WYG	Crystal structure of Xpo1p-PKI-Gsp1p-GTP complex Descriptor: Exportin-1, GUANOSINE-5'-TRIPHOSPHATE, Gsp1p, ... Authors: Koyama, M, Shirai, N, Matsuura, Y. Deposit date: 2014-08-26 Release date: 2014-11-12 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Structural insights into how yrb2p accelerates the assembly of the xpo1p nuclear export complex Cell Rep, 9, 2014
5YU4	Structural basis for recognition of L-lysine, L-ornithine, and L-2,4-diamino butyric acid by lysine cyclodeaminase Descriptor: 2,4-DIAMINOBUTYRIC ACID, Lysine cyclodeaminase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ... Authors: Min, K.J, Yoon, H.J, Matsuura, A, Kim, Y.H, Lee, H.H. Deposit date: 2017-11-20 Release date: 2018-05-02 Last modified: 2024-03-27 Method: X-RAY DIFFRACTION (2.144 Å) Cite: Structural Basis for Recognition of L-lysine, L-ornithine, and L-2,4-diamino Butyric Acid by Lysine Cyclodeaminase. Mol. Cells, 41, 2018
5WR3	Thermolysin, SFX liganded form with water-based carrier Descriptor: CALCIUM ION, N-[(benzyloxy)carbonyl]-L-aspartic acid, Thermolysin, ... Authors: Kunishima, N, Naitow, H, Matsuura, Y. Deposit date: 2016-11-29 Release date: 2017-08-16 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Protein-ligand complex structure from serial femtosecond crystallography using soaked thermolysin microcrystals and comparison with structures from synchrotron radiation Acta Crystallogr D Struct Biol, 73, 2017
5WUN	Crystal structure of mouse importin-alpha1 bound to non-phosphorylated NLS of EBNA1 Descriptor: Epstein-Barr nuclear antigen 1, Importin subunit alpha-1 Authors: Nakada, R, Hirano, H, Matsuura, Y. Deposit date: 2016-12-19 Release date: 2017-01-25 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Structural basis for the regulation of nuclear import of Epstein-Barr virus nuclear antigen 1 (EBNA1) by phosphorylation of the nuclear localization signal. Biochem. Biophys. Res. Commun., 484, 2017
5WUM	Crystal structure of mouse importin-alpha1 bound to S385-phosphorylated NLS of EBNA1 Descriptor: Epstein-Barr nuclear antigen 1, Importin subunit alpha-1 Authors: Nakada, R, Hirano, H, Matsuura, Y. Deposit date: 2016-12-19 Release date: 2017-01-25 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2 Å) Cite: Structural basis for the regulation of nuclear import of Epstein-Barr virus nuclear antigen 1 (EBNA1) by phosphorylation of the nuclear localization signal. Biochem. Biophys. Res. Commun., 484, 2017
5WR6	Thermolysin, liganded form with cryo condition 2 Descriptor: CALCIUM ION, N-[(benzyloxy)carbonyl]-L-aspartic acid, Thermolysin, ... Authors: Kunishima, N, Naitow, H, Matsuura, Y. Deposit date: 2016-11-29 Release date: 2017-08-16 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Protein-ligand complex structure from serial femtosecond crystallography using soaked thermolysin microcrystals and comparison with structures from synchrotron radiation Acta Crystallogr D Struct Biol, 73, 2017
5X8N	Crystal structure of mouse importin-alpha1 bound to the nuclear localization signal of Epstein-Barr virus EBNA-LP protein Descriptor: Epstein-Barr nuclear antigen leader protein, Importin subunit alpha-1 Authors: Nakada, R, Matsuura, Y. Deposit date: 2017-03-03 Release date: 2017-04-19 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Crystal structure of importin-alpha bound to the nuclear localization signal of Epstein-Barr virus EBNA-LP protein Protein Sci., 26, 2017
5ZGO	Crystal structure of APRT2 from Thermus thermophilus HB8 Descriptor: Adenine phosphoribosyltransferase Authors: Kunishima, N, Naitow, H, Matsuura, Y. Deposit date: 2018-03-09 Release date: 2019-03-06 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Structural and functional characterization of thermostable biocatalysts for the synthesis of 6-aminopurine nucleoside-5'-monophospate analogues. Bioresour. Technol., 276, 2019
5YU0	Structural basis for recognition of L-lysine, L-ornithine, and L-2,4-diamino butyric acid by lysine cyclodeaminase Descriptor: Lysine cyclodeaminase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SODIUM ION Authors: Min, K.J, Yoon, H.J, Matsuura, A, Kim, Y.H, Lee, H.H. Deposit date: 2017-11-20 Release date: 2018-05-02 Last modified: 2024-03-27 Method: X-RAY DIFFRACTION (1.92 Å) Cite: Structural Basis for Recognition of L-lysine, L-ornithine, and L-2,4-diamino Butyric Acid by Lysine Cyclodeaminase. Mol. Cells, 41, 2018
5YU1	Structural basis for recognition of L-lysine, L-ornithine, and L-2,4-diamino butyric acid by lysine cyclodeaminase Descriptor: (2S)-piperidine-2-carboxylic acid, Lysine cyclodeaminase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ... Authors: Min, K.J, Yoon, H.J, Matsuura, A, Kim, Y.H, Lee, H.H. Deposit date: 2017-11-20 Release date: 2018-05-02 Last modified: 2024-03-27 Method: X-RAY DIFFRACTION (1.923 Å) Cite: Structural Basis for Recognition of L-lysine, L-ornithine, and L-2,4-diamino Butyric Acid by Lysine Cyclodeaminase. Mol. Cells, 41, 2018
5XVC	[NiFe]-hydrogenase (Hyb-type) from Citrobacter sp. S-77 in a ferricyanide-oxidized condition Descriptor: DI(HYDROXYETHYL)ETHER, FE3-S4 CLUSTER, FE4-S4-O CLUSTER, ... Authors: Nishikawa, K, Matsuura, H, Muhd Noor, N.D, Tai, H, Hirota, S, Kim, J, Kang, J, Tateno, M, Yoon, K.S, Ogo, S, Shomura, Y, Higuchi, Y. Deposit date: 2017-06-27 Release date: 2018-06-27 Last modified: 2019-07-10 Method: X-RAY DIFFRACTION (2.05 Å) Cite: Redox-dependent conformational changes of a proximal [4Fe-4S] cluster in Hyb-type [NiFe]-hydrogenase to protect the active site from O2. Chem.Commun.(Camb.), 54, 2018
5XW4	Crystal structure of budding yeast Cdc14p (wild type) in the apo state Descriptor: Tyrosine-protein phosphatase CDC14 Authors: Kobayashi, J, Matsuura, Y. Deposit date: 2017-06-29 Release date: 2017-08-09 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Structure and dimerization of the catalytic domain of the protein phosphatase Cdc14p, a key regulator of mitotic exit in Saccharomyces cerevisiae Protein Sci., 26, 2017
5XOJ	Crystal structure of Xpo1p-PKI-Nup42p-Gsp1p-GTP complex Descriptor: Exportin-1, GTP-binding nuclear protein, GUANOSINE-5'-TRIPHOSPHATE, ... Authors: Koyama, M, Shirai, N, Matsuura, Y. Deposit date: 2017-05-29 Release date: 2017-08-16 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Crystal structure of the Xpo1p nuclear export complex bound to the SxFG/PxFG repeats of the nucleoporin Nup42p Genes Cells, 22, 2017
5XW5	Crystal structure of budding yeast Cdc14p (C283S) bound to a Swi6p phosphopeptide Descriptor: Regulatory protein SWI6, SULFATE ION, Tyrosine-protein phosphatase CDC14 Authors: Kobayashi, J, Matsuura, Y. Deposit date: 2017-06-29 Release date: 2017-08-09 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Structure and dimerization of the catalytic domain of the protein phosphatase Cdc14p, a key regulator of mitotic exit in Saccharomyces cerevisiae Protein Sci., 26, 2017
5YU3	Structural basis for recognition of L-lysine, L-ornithine, and L-2,4-diamino butyric acid by lysine cyclodeaminase Descriptor: Lysine cyclodeaminase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PROLINE, ... Authors: Min, K.J, Yoon, H.J, Matsuura, A, Kim, Y.H, Lee, H.H. Deposit date: 2017-11-20 Release date: 2018-05-02 Last modified: 2024-03-27 Method: X-RAY DIFFRACTION (1.79 Å) Cite: Structural Basis for Recognition of L-lysine, L-ornithine, and L-2,4-diamino Butyric Acid by Lysine Cyclodeaminase. Mol. Cells, 41, 2018
5WR4	Thermolysin, SFX unliganded form with oil-based carrier Descriptor: CALCIUM ION, Thermolysin, ZINC ION Authors: Kunishima, N, Naitow, H, Matsuura, Y. Deposit date: 2016-11-29 Release date: 2017-08-16 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Protein-ligand complex structure from serial femtosecond crystallography using soaked thermolysin microcrystals and comparison with structures from synchrotron radiation Acta Crystallogr D Struct Biol, 73, 2017
5WR5	Thermolysin, liganded form with cryo condition 1 Descriptor: CALCIUM ION, N-[(benzyloxy)carbonyl]-L-aspartic acid, TETRAETHYLENE GLYCOL, ... Authors: Kunishima, N, Naitow, H, Matsuura, Y. Deposit date: 2016-11-29 Release date: 2017-08-16 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Protein-ligand complex structure from serial femtosecond crystallography using soaked thermolysin microcrystals and comparison with structures from synchrotron radiation Acta Crystallogr D Struct Biol, 73, 2017
5XGS	Crystal structure of human WBSCR16 Descriptor: RCC1-like G exchanging factor-like protein Authors: Koyama, M, Sasaki, N, Matsuura, Y. Deposit date: 2017-04-16 Release date: 2017-06-21 Last modified: 2024-03-27 Method: X-RAY DIFFRACTION (2 Å) Cite: Crystal structure of human WBSCR16, an RCC1-like protein in mitochondria Protein Sci., 26, 2017

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