Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6LN6
DownloadVisualize
BU of 6ln6 by Molmil
CryoEM structure of SERCA2b T1032stop in E1-2Ca2+-AMPPCP (class2)
Descriptor: CALCIUM ION, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
Authors:Zhang, Y, Tsutsumi, A, Watanabe, S, Inaba, K.
Deposit date:2019-12-28
Release date:2020-08-26
Last modified:2020-09-16
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Cryo-EM structures of SERCA2b reveal the mechanism of regulation by the luminal extension tail.
Sci Adv, 6, 2020
4IWV
DownloadVisualize
BU of 4iwv by Molmil
Crystals structure of Human Glucokinase in complex with small molecule activator
Descriptor: (2S)-2-{[1-(2-chlorophenyl)-1H-pyrazolo[3,4-d]pyrimidin-4-yl]oxy}-N-(5-chloropyridin-2-yl)-3-(2-hydroxyethoxy)propanamide, Glucokinase isoform 3, SODIUM ION, ...
Authors:Ogg, D.J, Hargreaves, D, Gerhardt, S, Flavell, L, McAlister, M.
Deposit date:2013-01-24
Release date:2013-04-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Optimising pharmacokinetics of glucokinase activators with matched triplicate design sets the discovery of AZD3651 and AZD9485
To be Published
4J1P
DownloadVisualize
BU of 4j1p by Molmil
X-ray crystal structure of bromodomain 2 of human brd2 in complex with rvx208 to 1.08 A resolution
Descriptor: 1,2-ETHANEDIOL, 2-[4-(2-hydroxyethoxy)-3,5-dimethylphenyl]-5,7-dimethoxyquinazolin-4(3H)-one, Bromodomain containing 2, ...
Authors:Stein, A.J, White, A, Suto, R.K.
Deposit date:2013-02-01
Release date:2014-01-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:RVX-208, an Inducer of ApoA-I in Humans, Is a BET Bromodomain Antagonist.
Plos One, 8, 2013
8VVK
DownloadVisualize
BU of 8vvk by Molmil
CCHFV GP38 bound to ADI-46143 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ADI-46143 Fab Heavy Chain, ADI-46143 Fab Light Chain, ...
Authors:Hjorth, C.K, McLellan, J.S.
Deposit date:2024-01-31
Release date:2024-07-17
Last modified:2024-07-24
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Crimean-Congo hemorrhagic fever survivors elicit protective non-neutralizing antibodies that target 11 overlapping regions on glycoprotein GP38.
Cell Rep, 43, 2024
8VVL
DownloadVisualize
BU of 8vvl by Molmil
CCHFV GP38 bound to c13G8 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Hjorth, C.K, Mishra, A.K, McLellan, J.S.
Deposit date:2024-01-31
Release date:2024-07-17
Last modified:2024-07-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crimean-Congo hemorrhagic fever survivors elicit protective non-neutralizing antibodies that target 11 overlapping regions on glycoprotein GP38.
Cell Rep, 43, 2024
4IUG
DownloadVisualize
BU of 4iug by Molmil
Crystal structure of beta-galactosidase from Aspergillus oryzae in complex with galactose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-beta-D-mannopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-6-O-phosphono-beta-D-mannopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-beta-D-mannopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-beta-D-mannopyranose-(1-4)-beta-D-mannopyranose, ...
Authors:Maksimainen, M, Rouvinen, J.
Deposit date:2013-01-21
Release date:2013-07-31
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The crystal structure of acidic beta-galactosidase from Aspergillus oryzae.
Int.J.Biol.Macromol., 60C, 2013
4JI9
DownloadVisualize
BU of 4ji9 by Molmil
JAK2 kinase (JH1 domain) in complex with TG101209
Descriptor: N-tert-butyl-3-[(5-methyl-2-{[4-(4-methylpiperazin-1-yl)phenyl]amino}pyrimidin-4-yl)amino]benzenesulfonamide, Tyrosine-protein kinase JAK2
Authors:Eigenbrot, C, Ultsch, M.
Deposit date:2013-03-05
Release date:2013-08-07
Last modified:2013-08-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:2-Amino-[1,2,4]triazolo[1,5-a]pyridines as JAK2 inhibitors.
Bioorg.Med.Chem.Lett., 23, 2013
4JXX
DownloadVisualize
BU of 4jxx by Molmil
Crystal structure of E coli E. coli glutaminyl-tRNA synthetase bound to tRNA(Gln)(CUG) and ATP from novel cryostabilization conditions
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Glutamine--tRNA ligase, RNA (71-MER), ...
Authors:Perona, J.J, Rodriguez-Hernandez, A.
Deposit date:2013-03-28
Release date:2013-05-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and Mechanistic Basis for Enhanced Translational Efficiency by 2-Thiouridine at the tRNA Anticodon Wobble Position.
J.Mol.Biol., 425, 2013
4J6I
DownloadVisualize
BU of 4j6i by Molmil
Discovery of thiazolobenzoxepin PI3-kinase inhibitors that spare the PI3-kinase beta isoform
Descriptor: 2-methyl-1-(4-{2-[1-(2,2,2-trifluoroethyl)-1H-1,2,4-triazol-5-yl]-4,5-dihydro[1]benzoxepino[5,4-d][1,3]thiazol-8-yl}-1H-pyrazol-1-yl)propan-2-ol, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform
Authors:Murray, J.M, Rouge, L, Wu, P.
Deposit date:2013-02-11
Release date:2013-08-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Discovery of thiazolobenzoxepin PI3-kinase inhibitors that spare the PI3-kinase beta isoform.
Bioorg.Med.Chem.Lett., 23, 2013
2RMS
DownloadVisualize
BU of 2rms by Molmil
Solution structure of the mSin3A PAH1-SAP25 SID complex
Descriptor: MSin3A-binding protein, Paired amphipathic helix protein Sin3a
Authors:Sahu, S.C, Swanson, K.A, Kang, R.S, Huang, K, Brubaker, K, Ratcliff, K, Radhakrishnan, I.
Deposit date:2007-11-14
Release date:2008-01-22
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Conserved Themes in Target Recognition by the PAH1 and PAH2 Domains of the Sin3 Transcriptional Corepressor
J.Mol.Biol., 375, 2007
4JO3
DownloadVisualize
BU of 4jo3 by Molmil
Crystal structure of rabbit mAb R20 Fab in complex with V3 C-terminus of HIV-1 Consensus B gp120
Descriptor: SULFATE ION, gp120, monoclonal anti-HIV-1 gp120 V3 antibody R20 heavy chain, ...
Authors:Pan, R.M, Kong, X.P.
Deposit date:2013-03-16
Release date:2013-07-31
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Rabbit Anti-HIV-1 Monoclonal Antibodies Raised by Immunization Can Mimic the Antigen-Binding Modes of Antibodies Derived from HIV-1-Infected Humans.
J.Virol., 87, 2013
4JBV
DownloadVisualize
BU of 4jbv by Molmil
Calcium-Dependent Protein Kinase 1 from Toxoplasma gondii (TgCDPK1) in complex with inhibitor UW1268
Descriptor: 1-[(1-methylpiperidin-4-yl)methyl]-3-[6-(2-methylpropoxy)naphthalen-2-yl]pyrazolo[3,4-d]pyrimidin-4-amine, Calmodulin-domain protein kinase 1
Authors:Merritt, E.A, Larson, E.T.
Deposit date:2013-02-20
Release date:2014-03-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Development of potent and selective Plasmodium falciparum calcium-dependent protein kinase 4 (PfCDPK4) inhibitors that block the transmission of malaria to mosquitoes.
Eur.J.Med.Chem., 74, 2014
2RMR
DownloadVisualize
BU of 2rmr by Molmil
Solution structure of mSin3A PAH1 domain
Descriptor: Paired amphipathic helix protein Sin3a
Authors:Sahu, S.C, Swanson, K.A, Kang, R.S, Huang, K, Brubaker, K, Ratcliff, K, Radhakrishnan, I.
Deposit date:2007-11-14
Release date:2008-01-22
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Conserved Themes in Target Recognition by the PAH1 and PAH2 Domains of the Sin3 Transcriptional Corepressor
J.Mol.Biol., 375, 2007
5LA3
DownloadVisualize
BU of 5la3 by Molmil
[FeFe]-hydrogenase CpI from Clostridium pasteurianum, variant E279A
Descriptor: FE2/S2 (INORGANIC) CLUSTER, IRON/SULFUR CLUSTER, Iron hydrogenase 1, ...
Authors:Duan, J, Esselborn, J, Hofmann, E, Winkler, M, Happe, T.
Deposit date:2016-06-13
Release date:2017-06-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Accumulating the hydride state in the catalytic cycle of [FeFe]-hydrogenases.
Nat Commun, 8, 2017
6HWO
DownloadVisualize
BU of 6hwo by Molmil
Crystal structure of human phosphodiesterase 4D2 catalytic domain with inhibitor NPD-1335
Descriptor: 1,2-ETHANEDIOL, 3-[5-[(4aR,8aS)-4-OXIDANYLIDENE-3-PROPAN-2-YL-4a,5,8,8a-TETRAHYDROPHTHALAZIN-1-YL]-2-METHOXY-PHENYL]-N-(PHENYLMETHYL)PROP-2-YNAMIDE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Singh, A.K, Brown, D.G.
Deposit date:2018-10-12
Release date:2019-07-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Alkynamide phthalazinones as a new class of TbrPDEB1 inhibitors (Part 2).
Bioorg.Med.Chem., 27, 2019
4JYZ
DownloadVisualize
BU of 4jyz by Molmil
Crystal structure of E. coli glutaminyl-tRNA synthetase bound to ATP and native tRNA(Gln) containing the cmnm5s2U34 anticodon wobble base
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Glutamine--tRNA ligase, RNA (72-MER), ...
Authors:Perona, J.J, Rodriguez-Hernandez, A.
Deposit date:2013-04-01
Release date:2013-05-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and Mechanistic Basis for Enhanced Translational Efficiency by 2-Thiouridine at the tRNA Anticodon Wobble Position.
J.Mol.Biol., 425, 2013
6MS4
DownloadVisualize
BU of 6ms4 by Molmil
Crystal structure of the DENR-MCT-1 complex
Descriptor: Density-regulated protein, GLYCEROL, Malignant T-cell-amplified sequence 1, ...
Authors:Lomakin, I.B, Steitz, T.A, Dmitriev, S.E.
Deposit date:2018-10-16
Release date:2019-01-02
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Crystal structure of the DENR-MCT-1 complex revealed zinc-binding site essential for heterodimer formation.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
2VKL
DownloadVisualize
BU of 2vkl by Molmil
X-ray crystal structure of the intracellular Chorismate mutase from Mycobactrerium Tuberculosis in complex with malate
Descriptor: D-MALATE, RV0948C/MT0975
Authors:Okvist, M, Roderer, K, Sasso, S, Kast, P, Krengel, U.
Deposit date:2007-12-20
Release date:2008-01-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure and Function of a Complex between Chorismate Mutase and Dahp Synthase: Efficiency Boost for the Junior Partner.
Embo J., 28, 2009
4KIO
DownloadVisualize
BU of 4kio by Molmil
Kinase domain mutant of human Itk in complex with a covalently-binding inhibitor
Descriptor: 1-[(3S)-3-{[4-(morpholin-4-ylmethyl)-6-([1,3]thiazolo[5,4-b]pyridin-2-ylamino)pyrimidin-2-yl]amino}pyrrolidin-1-yl]prop-2-en-1-one, 1-[(3S)-3-{[4-(morpholin-4-ylmethyl)-6-([1,3]thiazolo[5,4-b]pyridin-2-ylamino)pyrimidin-2-yl]amino}pyrrolidin-1-yl]propan-1-one, GLYCEROL, ...
Authors:Somers, D.O.
Deposit date:2013-05-02
Release date:2013-08-21
Last modified:2014-02-12
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Discovery of novel irreversible inhibitors of interleukin (IL)-2-inducible tyrosine kinase (Itk) by targeting cysteine 442 in the ATP pocket.
J.Biol.Chem., 288, 2013
8OWU
DownloadVisualize
BU of 8owu by Molmil
The crystal structure of the polymorphic toxin PT7(Bc) D37A mutant and its cognate immunity PIM7(Bc) complex
Descriptor: MAGNESIUM ION, PIM7, Transposase
Authors:Tzarum, N, Fraenkel, R, Deouell, N, Cahana, I.
Deposit date:2023-04-28
Release date:2024-06-19
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Systematic Discovery of Antibacterial and Antifungal Bacterial Toxins
To Be Published
8OWS
DownloadVisualize
BU of 8ows by Molmil
The crystal structure of the polymorphic toxin PT1(Em) H44A mutant and its cognate immunity PIM1(Em) complex
Descriptor: PIM1, Type IV secretion protein Rhs
Authors:Tzarum, N, Fraenkel, R, Deouell, N, Cahana, I.
Deposit date:2023-04-28
Release date:2024-07-03
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Systematic Discovery of Antibacterial and Antifungal Bacterial Toxins
To Be Published
4K59
DownloadVisualize
BU of 4k59 by Molmil
Crystal Structure of Pseudomonas Aeruginosa RsmF
Descriptor: RNA BINDING PROTEIN RsmF
Authors:Betts, L, Walton, W.G, Redinbo, M.R.
Deposit date:2013-04-14
Release date:2013-08-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:An unusual CsrA family member operates in series with RsmA to amplify posttranscriptional responses in Pseudomonas aeruginosa.
Proc.Natl.Acad.Sci.USA, 110, 2013
6HWN
DownloadVisualize
BU of 6hwn by Molmil
Structure of Thermus thermophilus ClpP in complex with a tripeptide.
Descriptor: ATP-dependent Clp protease proteolytic subunit, DI(HYDROXYETHYL)ETHER, Unknown tripeptide
Authors:Felix, J, Schanda, P, Fraga, H, Morlot, C.
Deposit date:2018-10-12
Release date:2019-09-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Mechanism of the allosteric activation of the ClpP protease machinery by substrates and active-site inhibitors.
Sci Adv, 5, 2019
4IGF
DownloadVisualize
BU of 4igf by Molmil
Crystal structure of Plasmodium falciparum FabI complexed with NAD and inhibitor 3-(4-Chloro-2-hydroxyphenoxy)-7-hydroxy-2H-chromen-2-one
Descriptor: 3-(4-chloro-2-hydroxyphenoxy)-7-hydroxy-2H-chromen-2-one, Enoyl-acyl carrier reductase, GLYCEROL, ...
Authors:Kostrewa, D, Perozzo, R.
Deposit date:2012-12-17
Release date:2013-11-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Design, Synthesis, and Biological and Crystallographic Evaluation of Novel Inhibitors of Plasmodium falciparum Enoyl-ACP-reductase (PfFabI)
J.Med.Chem., 56, 2013
5L3L
DownloadVisualize
BU of 5l3l by Molmil
D11 bound IGF-II
Descriptor: Insulin-like growth factor II
Authors:Hexnerova, R.
Deposit date:2016-05-23
Release date:2016-08-10
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Probing Receptor Specificity by Sampling the Conformational Space of the Insulin-like Growth Factor II C-domain.
J.Biol.Chem., 291, 2016

225681

PDB entries from 2024-10-02

PDB statisticsPDBj update infoContact PDBjnumon