Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4MIF
DownloadVisualize
BU of 4mif by Molmil
Pyranose 2-oxidase from Phanerochaete chrysosporium, wild type from natural source
Descriptor: DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, MAGNESIUM ION, Pyranose 2-oxidase
Authors:Hassan, N, Tan, T.C, Spadiut, O, Pisanelli, I, Fusco, L, Haltrich, D, Peterbauer, C, Divne, C.
Deposit date:2013-08-31
Release date:2013-12-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of Phanerochaete chrysosporium pyranose 2-oxidase suggest that the N-terminus acts as a propeptide that assists in homotetramer assembly.
FEBS Open Bio, 3, 2013
4I7E
DownloadVisualize
BU of 4i7e by Molmil
Crystal Structure of the Bacillus stearothermophilus Phosphofructokinase Mutant D12A in Complex with PEP
Descriptor: 6-phosphofructokinase, PHOSPHOENOLPYRUVATE
Authors:Mosser, R, Reddy, M, Bruning, J.B, Sacchettini, J.C, Reinhart, G.D.
Deposit date:2012-11-30
Release date:2013-07-31
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Redefining the Role of the Quaternary Shift in Bacillus stearothermophilus Phosphofructokinase.
Biochemistry, 52, 2013
4I36
DownloadVisualize
BU of 4i36 by Molmil
Crystal Structure of the Bacillus stearothermophilus Phosphofructokinase Mutant D12A
Descriptor: 6-phosphofructokinase
Authors:Mosser, R, Reddy, M, Bruning, J.B, Sacchettini, J.C, Reinhart, G.D.
Deposit date:2012-11-25
Release date:2013-07-31
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Redefining the Role of the Quaternary Shift in Bacillus stearothermophilus Phosphofructokinase.
Biochemistry, 52, 2013
4N6W
DownloadVisualize
BU of 4n6w by Molmil
X-Ray Crystal Structure of Citrate-bound PhnZ
Descriptor: CITRATE ANION, FE (III) ION, Predicted HD phosphohydrolase PhnZ
Authors:Worsdorfer, B, Lingaraju, M, Yennawar, N.H, Boal, A.K, Krebs, C, Bollinger Jr, J.M, Pandelia, M.E.
Deposit date:2013-10-14
Release date:2013-11-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Organophosphonate-degrading PhnZ reveals an emerging family of HD domain mixed-valent diiron oxygenases.
Proc.Natl.Acad.Sci.USA, 110, 2013
5OFU
DownloadVisualize
BU of 5ofu by Molmil
Crystal structure of Leishmania major fructose-1,6-bisphosphatase in T-state.
Descriptor: 6-O-phosphono-beta-D-fructofuranose, ADENOSINE MONOPHOSPHATE, CHLORIDE ION, ...
Authors:Yuan, M, Vasquez-Valdivieso, M.G, McNae, I.W, Michels, P.A.M, Fothergill-Gilmore, L.A, Walkinshaw, M.D.
Deposit date:2017-07-11
Release date:2017-09-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Structures of Leishmania Fructose-1,6-Bisphosphatase Reveal Species-Specific Differences in the Mechanism of Allosteric Inhibition.
J. Mol. Biol., 429, 2017
8JD8
DownloadVisualize
BU of 8jd8 by Molmil
Crystal structure of Citrus limon Cu-Zn superoxide dismutase
Descriptor: COPPER (II) ION, Superoxide dismutase [Cu-Zn], ZINC ION
Authors:Utami, R.A, Yoshida, H, Retnoningrum, D.S, Ismaya, W.T.
Deposit date:2023-05-12
Release date:2023-12-27
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Direct relationship between dimeric form and activity in the acidic copper-zinc superoxide dismutase from lemon.
Acta Crystallogr.,Sect.F, 79, 2023
3ZTS
DownloadVisualize
BU of 3zts by Molmil
Hexagonal form P6122 of the Aquifex aeolicus nucleoside diphosphate kinase (FINAL STAGE OF RADIATION DAMAGE)
Descriptor: NUCLEOSIDE DIPHOSPHATE KINASE
Authors:Boissier, F, Georgescauld, F, Moynie, L, Dupuy, J.-W, Sarger, C, Podar, M, Lascu, I, Giraud, M.-F, Dautant, A.
Deposit date:2011-07-12
Release date:2012-03-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:An Inter-Subunit Disulphide Bridge Stabilizes the Tetrameric Nucleoside Diphosphate Kinase of Aquifex Aeolicus
Proteins, 80, 2012
3ZTR
DownloadVisualize
BU of 3ztr by Molmil
Hexagonal form P6122 of the Aquifex aeolicus nucleoside diphosphate kinase (FIRST STAGE OF RADIATION DAMAGE)
Descriptor: NUCLEOSIDE DIPHOSPHATE KINASE
Authors:Boissier, F, Georgescauld, F, Moynie, L, Dupuy, J.-W, Sarger, C, Podar, M, Lascu, I, Giraud, M.-F, Dautant, A.
Deposit date:2011-07-12
Release date:2012-03-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:An Inter-Subunit Disulphide Bridge Stabilizes the Tetrameric Nucleoside Diphosphate Kinase of Aquifex Aeolicus
Proteins, 80, 2012
3ZTO
DownloadVisualize
BU of 3zto by Molmil
Orthorhombic crystal form C222 of the Aquifex aeolicus nucleoside diphosphate kinase
Descriptor: NUCLEOSIDE DIPHOSPHATE KINASE, SULFATE ION
Authors:Boissier, F, Georgescauld, F, Moynie, L, Dupuy, J.-W, Sarger, C, Podar, M, Lascu, I, Giraud, M.-F, Dautant, A.
Deposit date:2011-07-12
Release date:2012-03-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:An Intersubunit Disulfide Bridge Stabilizes the Tetrameric Nucleoside Diphosphate Kinase of Aquifex Aeolicus.
Proteins, 80, 2012
8JPX
DownloadVisualize
BU of 8jpx by Molmil
Cryo-EM structure of PfAgo-guide DNA-target DNA complex
Descriptor: Excess DNA, Guide DNA, MAGNESIUM ION, ...
Authors:Zhuang, L.
Deposit date:2023-06-13
Release date:2024-01-31
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Molecular mechanism for target recognition, dimerization, and activation of Pyrococcus furiosus Argonaute.
Mol.Cell, 84, 2024
3ZTP
DownloadVisualize
BU of 3ztp by Molmil
Orthorhombic crystal form P21212 of the Aquifex aeolicus nucleoside diphosphate kinase
Descriptor: GLYCEROL, NUCLEOSIDE DIPHOSPHATE KINASE, SULFATE ION
Authors:Boissier, F, Georgescauld, F, Moynie, L, Dupuy, J.-W, Sarger, C, Podar, M, Lascu, I, Giraud, M.-F, Dautant, A.
Deposit date:2011-07-12
Release date:2012-03-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:An Intersubunit Disulfide Bridge Stabilizes the Tetrameric Nucleoside Diphosphate Kinase of Aquifex Aeolicus.
Proteins, 80, 2012
3ZTQ
DownloadVisualize
BU of 3ztq by Molmil
Hexagonal crystal form P61 of the Aquifex aeolicus nucleoside diphosphate kinase
Descriptor: NUCLEOSIDE DIPHOSPHATE KINASE
Authors:Boissier, F, Georgescauld, F, Moynie, L, Dupuy, J.-W, Sarger, C, Podar, M, Lascu, I, Giraud, M.-F, Dautant, A.
Deposit date:2011-07-12
Release date:2012-02-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:An Inter-Subunit Disulphide Bridge Stabilizes the Tetrameric Nucleoside Diphosphate Kinase of Aquifex Aeolicus
Proteins, 80, 2012
5OEY
DownloadVisualize
BU of 5oey by Molmil
Crystal structure of Leishmania major fructose-1,6-bisphosphatase in holo form.
Descriptor: CITRIC ACID, FBP protein, MANGANESE (II) ION, ...
Authors:Yuan, M, Vasquez-Valdivieso, M.G, McNae, I.W, Michels, P.A.M, Fothergill-Gilmore, L.A, Walkinshaw, M.D.
Deposit date:2017-07-10
Release date:2017-09-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structures of Leishmania Fructose-1,6-Bisphosphatase Reveal Species-Specific Differences in the Mechanism of Allosteric Inhibition.
J. Mol. Biol., 429, 2017
1RWB
DownloadVisualize
BU of 1rwb by Molmil
Cooperative Effect of Two Surface Amino Acid Mutations (Q252L and E170K) of Glucose Dehydrogenase from Bacillus megaterium IWG3 for the stabilization of Oligomeric State
Descriptor: Glucose 1-dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Baik, S.-H, Michel, F, Haser, R, Harayama, S.
Deposit date:2003-12-16
Release date:2003-12-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Cooperative effect of two surface amino acid mutations (Q252L and E170K) in glucose dehydrogenase from Bacillus megaterium IWG3 on stabilization of its oligomeric state.
Appl.Environ.Microbiol., 71, 2005
1T96
DownloadVisualize
BU of 1t96 by Molmil
r106g kdo8ps with pep
Descriptor: 2-dehydro-3-deoxyphosphooctonate aldolase, CADMIUM ION, PHOSPHATE ION, ...
Authors:Gatti, D.L.
Deposit date:2004-05-14
Release date:2005-06-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Effects of the Arg106==>Gly mutation on the catalytic and conformational cycle of Aquifex aeolicus KDO8P synthase.
To be Published
1UNF
DownloadVisualize
BU of 1unf by Molmil
The crystal structure of the eukaryotic FeSOD from Vigna unguiculata suggests a new enzymatic mechanism
Descriptor: FE (III) ION, IRON SUPEROXIDE DISMUTASE
Authors:Munoz, I.G, Moran, J.F, Becana, M, Montoya, G.
Deposit date:2003-09-10
Release date:2004-10-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:The Crystal Structure of an Eukaryotic Iron Superoxide Dismutase Suggests Intersubunit Cooperation During Catalysis
Protein Sci., 14, 2005
2PMF
DownloadVisualize
BU of 2pmf by Molmil
The crystal structure of a human glycyl-tRNA synthetase mutant
Descriptor: CHLORIDE ION, GLYCEROL, Glycyl-tRNA synthetase
Authors:Xie, W.
Deposit date:2007-04-21
Release date:2007-05-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Long-range structural effects of a Charcot-Marie- Tooth disease-causing mutation in human glycyl-tRNA synthetase.
Proc.Natl.Acad.Sci.Usa, 104, 2007
2PME
DownloadVisualize
BU of 2pme by Molmil
The Apo crystal Structure of the glycyl-tRNA synthetase
Descriptor: Glycyl-tRNA synthetase
Authors:Xie, W.
Deposit date:2007-04-21
Release date:2007-05-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Long-range structural effects of a Charcot-Marie- Tooth disease-causing mutation in human glycyl-tRNA synthetase.
Proc.Natl.Acad.Sci.Usa, 104, 2007
8JAT
DownloadVisualize
BU of 8jat by Molmil
Crystal structure of the 3-ketodihydrosphingosine reductase TSC10 from Cryptococcus neoformans
Descriptor: 3-ketodihydrosphingosine reductase TSC10, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Zhao, P, Kuang, Z.
Deposit date:2023-05-07
Release date:2023-06-21
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of the 3-ketodihydrosphingosine reductase TSC10 from Cryptococcus neoformans.
Biochem.Biophys.Res.Commun., 670, 2023
4I4I
DownloadVisualize
BU of 4i4i by Molmil
Crystal Structure of Bacillus stearothermophilus Phosphofructokinase mutant T156A bound to PEP
Descriptor: 6-phosphofructokinase, PHOSPHOENOLPYRUVATE
Authors:Mosser, R, Reddy, M, Bruning, J.B, Sacchettini, J.C, Reinhart, G.D.
Deposit date:2012-11-27
Release date:2013-07-31
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4948 Å)
Cite:Redefining the Role of the Quaternary Shift in Bacillus stearothermophilus Phosphofructokinase.
Biochemistry, 52, 2013
5OEZ
DownloadVisualize
BU of 5oez by Molmil
Crystal structure of Leishmania major fructose-1,6-bisphosphatase in apo form.
Descriptor: FBP protein
Authors:Yuan, M, Vasquez-Valdivieso, M.G, McNae, I.W, Michels, P.A.M, Fothergill-Gilmore, L.A, Walkinshaw, M.D.
Deposit date:2017-07-10
Release date:2017-09-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Structures of Leishmania Fructose-1,6-Bisphosphatase Reveal Species-Specific Differences in the Mechanism of Allosteric Inhibition.
J. Mol. Biol., 429, 2017
3E2X
DownloadVisualize
BU of 3e2x by Molmil
H. influenzae beta-carbonic anhydrase, variant V47A
Descriptor: Carbonic anhydrase 2, SULFATE ION, ZINC ION
Authors:Rowlett, R.S, Lee, J.
Deposit date:2008-08-06
Release date:2009-08-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Evidence for a bicarbonate "escort" site in Haemophilus influenzae beta-carbonic anhydrase .
Biochemistry, 49, 2010
4AAE
DownloadVisualize
BU of 4aae by Molmil
Crystal structure of the mutant D75N I-CreI in complex with an altered target (The four central bases, 2NN region, are composed by AGCG from 5' to 3')
Descriptor: 24MER DNA, DNA ENDONUCLEASE I-CREI
Authors:Molina, R, Redondo, P, Stella, S, Marenchino, M, D'Abramo, M, Gervasio, F.L, Epinat, J.C, Valton, J, Grizot, S, Duchateau, P, Prieto, J, Montoya, G.
Deposit date:2011-12-01
Release date:2012-05-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Non-Specific Protein-DNA Interactions Control I-Crei Target Binding and Cleavage.
Nucleic Acids Res., 40, 2012
1NHI
DownloadVisualize
BU of 1nhi by Molmil
Crystal structure of N-terminal 40KD MutL (LN40) complex with ADPnP and one potassium
Descriptor: 1,2-ETHANEDIOL, DNA mismatch repair protein mutL, MAGNESIUM ION, ...
Authors:Hu, X, Machius, M, Yang, W.
Deposit date:2002-12-19
Release date:2003-06-10
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Monovalent cation dependence and preference of GHKL ATPases and kinases
FEBS Lett., 544, 2003
8OUP
DownloadVisualize
BU of 8oup by Molmil
Structural characterization of the hexa-coordinated globin from Spisula solidissima
Descriptor: GLYCEROL, Nerve hemoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Nardini, M, Pesce, A.
Deposit date:2023-04-24
Release date:2023-07-05
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and dynamic characterization of the hexa-coordinated globin from Spisula solidissima.
J.Inorg.Biochem., 246, 2023

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon