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5JDJ
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BU of 5jdj by Molmil
Crystal structure of domain I10 from titin in space group P212121
Descriptor: CALCIUM ION, Titin
Authors:Williams, R, Bogomolovas, J, Labiet, S, Mayans, O.
Deposit date:2016-04-16
Release date:2016-08-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.738 Å)
Cite:Exploration of pathomechanisms triggered by a single-nucleotide polymorphism in titin's I-band: the cardiomyopathy-linked mutation T2580I.
Open Biology, 6, 2016
5UK0
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BU of 5uk0 by Molmil
CryoEM structure of an influenza virus receptor-binding site antibody-antigen interface - Class 2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, ...
Authors:Liu, Y, Pan, J, Caradonna, T, Jenni, S, Raymond, D.D, Schmidt, A.G, Harrison, S.C, Grigorieff, N.
Deposit date:2017-01-19
Release date:2017-05-31
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:CryoEM Structure of an Influenza Virus Receptor-Binding Site Antibody-Antigen Interface.
J. Mol. Biol., 429, 2017
5K6P
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BU of 5k6p by Molmil
The NMR structure of the m domain tri-helix bundle and C2 of human cardiac Myosin Binding Protein C
Descriptor: Myosin-binding protein C, cardiac-type
Authors:Michie, K.A, Kwan, A.H, Tung, C.S, Guss, J.M, Trewhella, J.
Deposit date:2016-05-25
Release date:2016-11-09
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A Highly Conserved Yet Flexible Linker Is Part of a Polymorphic Protein-Binding Domain in Myosin-Binding Protein C.
Structure, 24, 2016
5KN7
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BU of 5kn7 by Molmil
Lipid A secondary acyltransferase LpxM from Acinetobacter baumannii
Descriptor: DODECYL-BETA-D-MALTOSIDE, GLYCEROL, Lipid A biosynthesis lauroyl acyltransferase, ...
Authors:Dovala, D.L, Hu, Q, Metzger IV, L.E.
Deposit date:2016-06-27
Release date:2016-09-28
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structure-guided enzymology of the lipid A acyltransferase LpxM reveals a dual activity mechanism.
Proc.Natl.Acad.Sci.USA, 113, 2016
5TZO
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BU of 5tzo by Molmil
Computationally Designed Fentanyl Binder - Fen49*-Complex
Descriptor: CHLORIDE ION, Endo-1,4-beta-xylanase A, N-phenyl-N-[1-(2-phenylethyl)piperidin-4-yl]propanamide, ...
Authors:Bick, M.J, Greisen, P.J, Morey, K.J, Antunes, M.S, La, D, Sankaran, B, Reymond, L, Johnsson, K, Medford, J.I, Baker, D.
Deposit date:2016-11-22
Release date:2017-10-04
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Computational design of environmental sensors for the potent opioid fentanyl.
Elife, 6, 2017
5KNK
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BU of 5knk by Molmil
Lipid A secondary acyltransferase LpxM from Acinetobacter baumannii with catalytic residue substitution (E127A)
Descriptor: DODECYL-BETA-D-MALTOSIDE, GLYCEROL, Lipid A biosynthesis lauroyl acyltransferase, ...
Authors:Dovala, D.L, Hu, Q, Metzger IV, L.E.
Deposit date:2016-06-28
Release date:2016-09-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-guided enzymology of the lipid A acyltransferase LpxM reveals a dual activity mechanism.
Proc.Natl.Acad.Sci.USA, 113, 2016
5UK1
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BU of 5uk1 by Molmil
CryoEM structure of an influenza virus receptor-binding site antibody-antigen interface - Class 3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, ...
Authors:Liu, Y, Pan, J, Caradonna, T, Jenni, S, Raymond, D.D, Schmidt, A.G, Harrison, S.C, Grigorieff, N.
Deposit date:2017-01-19
Release date:2017-05-31
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:CryoEM Structure of an Influenza Virus Receptor-Binding Site Antibody-Antigen Interface.
J. Mol. Biol., 429, 2017
5V3R
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BU of 5v3r by Molmil
CHMP4C in complex with ALIX BRO1
Descriptor: Charged multivesicular body protein 4c, Programmed cell death 6-interacting protein
Authors:Wenzel, D.M, Alam, S.L, Sundquist, W.I.
Deposit date:2017-03-08
Release date:2018-09-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.906 Å)
Cite:A cancer-associated polymorphism in ESCRT-III disrupts the abscission checkpoint and promotes genome instability.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5TVV
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BU of 5tvv by Molmil
Computationally Designed Fentanyl Binder - Fen49* Apo
Descriptor: Endo-1,4-beta-xylanase A, POTASSIUM ION
Authors:Bick, M.J, Greisen, P.J, Morey, K.J, Antunes, A.S, La, D, Sankaran, B, Reymond, L, Johnsson, K, Medford, J.I, Baker, D.
Deposit date:2016-11-10
Release date:2017-10-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Computational design of environmental sensors for the potent opioid fentanyl.
Elife, 6, 2017
4KFD
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BU of 4kfd by Molmil
Crystal structure of Hansenula polymorpha copper amine oxidase-1 reduced by methylamine at pH 6.0
Descriptor: COPPER (II) ION, GLYCEROL, HYDROGEN PEROXIDE, ...
Authors:Johnson, B.J, Yukl, E.T, Klema, V.J, Wilmot, C.M.
Deposit date:2013-04-26
Release date:2013-08-21
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Structural evidence for the semiquinone in a copper amine oxidase from Hansenula polymorpha: implications for the catalytic mechanism
J.Biol.Chem., 2013
8XH0
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BU of 8xh0 by Molmil
Monoclinic crystal structure of green fluorescent protein nowGFP at pH 4.8
Descriptor: GLYCEROL, nowGFP
Authors:Kim, C.U, Kim, J.K.
Deposit date:2023-12-16
Release date:2024-09-11
Last modified:2024-09-25
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Comparison of two crystal polymorphs of NowGFP reveals a new conformational state trapped by crystal packing.
Acta Crystallogr D Struct Biol, 80, 2024
8XH1
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BU of 8xh1 by Molmil
Orthorhombic crystal structure of green fluorescent protein nowGFP at pH 9.0
Descriptor: GLYCEROL, nowGFP
Authors:Kim, C.U, Kim, J.K.
Deposit date:2023-12-16
Release date:2024-09-11
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Comparison of two crystal polymorphs of NowGFP reveals a new conformational state trapped by crystal packing.
Acta Crystallogr D Struct Biol, 80, 2024
7ZHL
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BU of 7zhl by Molmil
Salmonella enterica Rhs1 C-terminal toxin TreTu
Descriptor: RHS repeat protein, ZINC ION
Authors:Jurenas, D, Rey, M, Chamot-Rooke, J, Terradot, L, Cascales, E.
Deposit date:2022-04-06
Release date:2022-11-23
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Salmonella antibacterial Rhs polymorphic toxin inhibits translation through ADP-ribosylation of EF-Tu P-loop.
Nucleic Acids Res., 50, 2022
7ZHM
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BU of 7zhm by Molmil
Salmonella enterica Rhs1 C-terminal toxin TreTu complex with TriTu immunity protein
Descriptor: Immunity protein TriTu, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Rhs1 protein, ...
Authors:Jurenas, D, Rey, M, Chamot-Rooke, J, Terradot, L, Cascales, E.
Deposit date:2022-04-06
Release date:2022-11-23
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Salmonella antibacterial Rhs polymorphic toxin inhibits translation through ADP-ribosylation of EF-Tu P-loop.
Nucleic Acids Res., 50, 2022
8XH2
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BU of 8xh2 by Molmil
Orthorhombic crystal structure of green fluorescent protein nowGFP at pH 6.0
Descriptor: GLYCEROL, nowGFP
Authors:Kim, C.U, Kim, J.K.
Deposit date:2023-12-16
Release date:2024-09-11
Last modified:2024-09-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Comparison of two crystal polymorphs of NowGFP reveals a new conformational state trapped by crystal packing.
Acta Crystallogr D Struct Biol, 80, 2024
6NEU
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BU of 6neu by Molmil
FAD-dependent monooxygenase TropB from T. stipitatus R206Q variant
Descriptor: CHLORIDE ION, FAD-dependent monooxygenase tropB, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Rodriguez Benitez, A, Tweedy, S.E, Baker Dockrey, S.A, Lukowski, A.L, Wymore, T, Khare, D, Brooks, C.L, Palfey, B.A, Smith, J.L, Narayan, A.R.H.
Deposit date:2018-12-18
Release date:2019-08-14
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for selectivity in flavin-dependent monooxygenase-catalyzed oxidative dearomatization.
Acs Catalysis, 9, 2019
7PUP
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BU of 7pup by Molmil
INOSITOL 1,3,4-TRISPHOSPHATE 5/6-KINASE 4 from Arabidopsis thaliana (AtITPK4) in complex with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Inositol 1,3,4-trisphosphate 5/6-kinase 4
Authors:Whitfield, H, He, S, Brearley, C.A, Hemmings, A.M.
Deposit date:2021-09-30
Release date:2022-10-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Diversification in the inositol tris/tetrakisphosphate kinase (ITPK) family: crystal structure and enzymology of the outlier AtITPK4.
Biochem.J., 480, 2023
6Y0X
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BU of 6y0x by Molmil
Fucosylated antimicrobial peptide SB6 in complex with the lectin LecRSL from Ralstonia solanacearum at 2.4 Angstrom resolution
Descriptor: 3,7-anhydro-2,8-dideoxy-L-glycero-D-gluco-octonic acid, D-LYSINE, Fucose-binding lectin protein, ...
Authors:Baeriswyl, S, Stocker, A, Reymond, J.-L.
Deposit date:2020-02-10
Release date:2021-02-17
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.425 Å)
Cite:Fucosylated antimicrobial peptide SB6 in complex with the lectin LecRSL from Ralstonia solanacearum at 2.4 Angstrom resolution
To Be Published
7V4A
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BU of 7v4a by Molmil
Heparin-induced alpha-synuclein fibrils polymorph 1
Descriptor: Alpha-synuclein
Authors:Tao, Y.Q, Sun, Y.P, Liu, C, Li, D.
Deposit date:2021-08-12
Release date:2022-08-17
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Heparin-induced alpha-synuclein fibrils polymorph 1
To Be Published
6Y0W
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BU of 6y0w by Molmil
Fucosylated antimicrobial linear peptide cFucRH46D in complex with the fucose binding lectin LecB from Pseudomonas aeruginosa at 2.1 Angstrom resolution
Descriptor: 3,7-anhydro-2,8-dideoxy-L-glycero-D-gluco-octonic acid, CALCIUM ION, Fucose-binding lectin, ...
Authors:Baeriswyl, S, Stocker, A, Reymond, J.-L.
Deposit date:2020-02-10
Release date:2021-02-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Fucosylated antimicrobial linear peptide cFucRH46D in complex with the fucose binding lectin LecB from Pseudomonas aeruginosa at 2.1 Angstrom resolution
To Be Published
6NEV
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BU of 6nev by Molmil
FAD-dependent monooxygenase TropB from T. stipitatus Y239F Variant
Descriptor: CHLORIDE ION, FAD-dependent monooxygenase tropB, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Rodriguez Benitez, A, Tweedy, S.E, Baker Dockrey, S.A, Lukowski, A.L, Wymore, T, Khare, D, Palfey, B.A, Smith, J.L, Narayan, A.R.H.
Deposit date:2018-12-18
Release date:2019-08-14
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.303 Å)
Cite:Structural basis for selectivity in flavin-dependent monooxygenase-catalyzed oxidative dearomatization.
Acs Catalysis, 9, 2019
6NYQ
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BU of 6nyq by Molmil
Crystal structure of glycosylated lysosomal membrane protein (GLMP) luminal domain bound to a Fab fragment
Descriptor: 1H3 Fab heavy chain, 1H3 Fab light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Huang, C.S, Boenig, G, Hymowitz, S.G.
Deposit date:2019-02-12
Release date:2020-01-22
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:GLMP is essential for bone-marrow hematopoiesis and lysosomal glycolipid metabolism
To Be Published
1K88
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BU of 1k88 by Molmil
Crystal structure of procaspase-7
Descriptor: procaspase-7
Authors:Chai, J, Wu, Q, Shiozaki, E, Srinivasa, S.M, Alnemri, E.S, Shi, Y.
Deposit date:2001-10-23
Release date:2001-11-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of a procaspase-7 zymogen: mechanisms of activation and substrate binding
Cell(Cambridge,Mass.), 107, 2001
5LQ6
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BU of 5lq6 by Molmil
Salmonella effector SpvD - R161 variant
Descriptor: SODIUM ION, Virulence protein vsdE
Authors:Zhang, Y, Grabe, G.J, Rolhion, N, Yang, Y, Holden, D.W, Hare, S.A.
Deposit date:2016-08-16
Release date:2016-11-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:The Salmonella Effector SpvD Is a Cysteine Hydrolase with a Serovar-specific Polymorphism Influencing Catalytic Activity, Suppression of Immune Responses, and Bacterial Virulence.
J. Biol. Chem., 291, 2016
6OFE
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BU of 6ofe by Molmil
Helical reconstruction of Type III Secretion System Needle filament mutant-PrgI S49A
Descriptor: Protein PrgI
Authors:Guo, E.Z, Galan, J.E.
Deposit date:2019-03-29
Release date:2019-07-10
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.61 Å)
Cite:A polymorphic helix of a Salmonella needle protein relays signals defining distinct steps in type III secretion.
Plos Biol., 17, 2019

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PDB entries from 2024-10-16

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