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8WDU
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Photosynthetic LH1-RC complex from the purple sulfur bacterium Allochromatium vinosum purified by sucrose density
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (2S)-3-hydroxypropane-1,2-diyl dihexadecanoate, Antenna complex alpha/beta subunit, ...
Authors:Tani, K, Kanno, R, Harada, A, Kobayashi, A, Minamino, A, Nakamura, N, Ji, X.-C, Purba, E.R, Hall, M, Yu, L.-J, Madigan, M.T, Mizoguchi, A, Iwasaki, K, Humbel, B.M, Kimura, Y, Wang-Otomo, Z.-Y.
Deposit date:2023-09-16
Release date:2024-02-21
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (2.24 Å)
Cite:High-resolution structure and biochemical properties of the LH1-RC photocomplex from the model purple sulfur bacterium, Allochromatium vinosum.
Commun Biol, 7, 2024
7QJ4
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BU of 7qj4 by Molmil
Structure of recombinant human gamma-Tubulin Ring Complex 10-spoked assembly intermediate (spokes 5-14)
Descriptor: Gamma-tubulin complex component 2, Gamma-tubulin complex component 3, Gamma-tubulin complex component 4, ...
Authors:Zupa, E, Pfeffer, S.
Deposit date:2021-12-16
Release date:2022-01-26
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Modular assembly of the principal microtubule nucleator gamma-TuRC.
Nat Commun, 13, 2022
8WA1
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The cryo-EM structure of the Nicotiana tabacum PEP-PAP-TEC2
Descriptor: DNA (24-mer), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Wu, X.X, Zhang, Y.
Deposit date:2023-09-06
Release date:2024-03-13
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Cryo-EM structures of the plant plastid-encoded RNA polymerase.
Cell, 187, 2024
8W9Z
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BU of 8w9z by Molmil
The cryo-EM structure of the Nicotiana tabacum PEP-PAP
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta'', ...
Authors:Wu, X.X, Zhang, Y.
Deposit date:2023-09-06
Release date:2024-03-13
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Cryo-EM structures of the plant plastid-encoded RNA polymerase.
Cell, 187, 2024
8WA0
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BU of 8wa0 by Molmil
The cryo-EM structure of the Nicotiana tabacum PEP-PAP-TEC1
Descriptor: DNA (48-mer), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Wu, X.X, Zhang, Y.
Deposit date:2023-09-06
Release date:2024-03-13
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Cryo-EM structures of the plant plastid-encoded RNA polymerase.
Cell, 187, 2024
5L68
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BU of 5l68 by Molmil
Yeast 20S proteasome with mouse beta5i (1-138) and mouse beta6 (97-111; 118-133) in complex with epoxyketone inhibitor 14
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Groll, M, Huber, E.M.
Deposit date:2016-05-28
Release date:2016-11-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A humanized yeast proteasome identifies unique binding modes of inhibitors for the immunosubunit beta 5i.
EMBO J., 35, 2016
5L52
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Yeast 20S proteasome in complex with epoxyketone inhibitor 14
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Groll, M, Huber, E.M.
Deposit date:2016-05-27
Release date:2016-11-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A humanized yeast proteasome identifies unique binding modes of inhibitors for the immunosubunit beta 5i.
EMBO J., 35, 2016
5L5J
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Yeast 20S proteasome with human beta5i (1-138) and human beta6 (97-111; 118-133) in complex with epoxyketone inhibitor 14
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Groll, M, Huber, E.M.
Deposit date:2016-05-28
Release date:2016-11-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A humanized yeast proteasome identifies unique binding modes of inhibitors for the immunosubunit beta 5i.
EMBO J., 35, 2016
1NTM
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BU of 1ntm by Molmil
Crystal Structure of Mitochondrial Cytochrome bc1 Complex at 2.4 Angstrom
Descriptor: Cytochrome b, FE2/S2 (INORGANIC) CLUSTER, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Gao, X, Wen, X, Esser, L, Quinn, B, Yu, L, Yu, C, Xia, D.
Deposit date:2003-01-30
Release date:2003-10-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for the quinone reduction in the bc(1) complex: a comparative analysis of crystal structures of mitochondrial cytochrome bc(1) with bound substrate and inhibitors at the Q(i) site
Biochemistry, 42, 2003
5LDX
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Structure of mammalian respiratory Complex I, class3.
Descriptor: Acyl carrier protein, mitochondrial, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Vinothkumar, K.R, Zhu, J, Hirst, J.
Deposit date:2016-06-28
Release date:2016-09-14
Last modified:2019-10-23
Method:ELECTRON MICROSCOPY (5.6 Å)
Cite:Structure of mammalian respiratory complex I.
Nature, 536, 2016
5LNK
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BU of 5lnk by Molmil
Entire ovine respiratory complex I
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, 4'-PHOSPHOPANTETHEINE, ...
Authors:Fiedorczuk, K, Letts, J.A, Kaszuba, K, Sazanov, L.A.
Deposit date:2016-08-04
Release date:2016-11-23
Last modified:2021-06-02
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Atomic structure of the entire mammalian mitochondrial complex I.
Nature, 538, 2016
1OG2
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BU of 1og2 by Molmil
Structure of human cytochrome P450 CYP2C9
Descriptor: CYTOCHROME P450 2C9, HEME C
Authors:Williams, P.A, Cosme, J, Ward, A, Angove, H.C, Matak Vinkovic, D, Jhoti, H.
Deposit date:2003-04-23
Release date:2003-07-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of Human Cytochrome P450 2C9 with Bound Warfarin
Nature, 424, 2003
1OG5
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BU of 1og5 by Molmil
Structure of human cytochrome P450 CYP2C9
Descriptor: CYTOCHROME P450 2C9, HEME C, S-WARFARIN
Authors:Williams, P.A, Cosme, J, Ward, A, Angove, H.C, Matak Vinkovic, D, Jhoti, H.
Deposit date:2003-04-24
Release date:2003-07-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal Structure of Human Cytochrome P450 2C9 with Bound Warfarin
Nature, 424, 2003
1P0V
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BU of 1p0v by Molmil
F393A mutant heme domain of flavocytochrome P450 BM3
Descriptor: Bifunctional P-450:NADPH-P450 reductase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Ost, T.W.B, Clark, J, Miles, C.S, Walkinshaw, M.D, Reid, G.A, Chapman, S.K, Daff, S, Mowat, C.G.
Deposit date:2003-04-11
Release date:2003-12-09
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Oxygen Activation and Electron Transfer in Flavocytochrome P450 BM3
J.Am.Chem.Soc., 125, 2003
1P0W
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BU of 1p0w by Molmil
F393W mutant heme domain of flavocytochrome P450 BM3
Descriptor: Bifunctional P-450:NADPH-P450 reductase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Ost, T.W.B, Clark, J, Miles, C.S, Walkinshaw, M.D, Reid, G.A, Chapman, S.K, Daff, S, Mowat, C.G.
Deposit date:2003-04-11
Release date:2003-12-09
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Oxygen Activation and Electron Transfer in Flavocytochrome P450 BM3
J.Am.Chem.Soc., 125, 2003
3WGV
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BU of 3wgv by Molmil
Crystal structure of a Na+-bound Na+,K+-ATPase preceding the E1P state with oligomycin
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Kanai, R, Ogawa, H, Vilsen, B, Cornelius, F, Toyoshima, C.
Deposit date:2013-08-09
Release date:2013-10-09
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of a Na1-bound Na1,K1-ATPase preceding the E1P state
Nature, 502, 2013
6WJN
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BU of 6wjn by Molmil
SD-like state of human 26S Proteasome with non-cleavable M1-linked hexaubiquitin and E3 ubiquitin ligase E6AP/UBE3A
Descriptor: 26S proteasome complex subunit SEM1, 26S proteasome non-ATPase regulatory subunit 1, 26S proteasome non-ATPase regulatory subunit 11, ...
Authors:Chen, X, Walters, K.J.
Deposit date:2020-04-14
Release date:2020-08-05
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (5.7 Å)
Cite:Cryo-EM Reveals Unanchored M1-Ubiquitin Chain Binding at hRpn11 of the 26S Proteasome.
Structure, 28, 2020
5EXB
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BU of 5exb by Molmil
Wild type green fluorescent protein DendFP (Dendronephthya sp.)
Descriptor: GLYCEROL, Green fluorescent protein
Authors:Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
Deposit date:2015-11-23
Release date:2016-08-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Crystal structure of the fluorescent protein from Dendronephthya sp. in both green and photoconverted red forms.
Acta Crystallogr D Struct Biol, 72, 2016
5GAS
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BU of 5gas by Molmil
Thermus thermophilus V/A-ATPase, conformation 2
Descriptor: Archaeal/vacuolar-type H+-ATPase subunit I, V-type ATP synthase alpha chain, V-type ATP synthase beta chain, ...
Authors:Schep, D.G, Zhao, J, Rubinstein, J.L.
Deposit date:2016-02-05
Release date:2016-03-09
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (9.5 Å)
Cite:Models for the a subunits of the Thermus thermophilus V/A-ATPase and Saccharomyces cerevisiae V-ATPase enzymes by cryo-EM and evolutionary covariance.
Proc.Natl.Acad.Sci.USA, 113, 2016
6X6C
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BU of 6x6c by Molmil
Cryo-EM structure of NLRP1-DPP9-VbP complex
Descriptor: Dipeptidyl peptidase 9, NACHT, LRR and PYD domains-containing protein 1, ...
Authors:Hollingsworth, L.R, Sharif, H, Griswold, A.R, Fontana, P, Mintseris, J, Dagbay, K.B, Paulo, J.A, Gygi, S.P, Bachovchin, D.A, Wu, H.
Deposit date:2020-05-27
Release date:2021-03-10
Last modified:2021-05-12
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:DPP9 sequesters the C terminus of NLRP1 to repress inflammasome activation.
Nature, 592, 2021
5MRF
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BU of 5mrf by Molmil
Structure of the yeast mitochondrial ribosome - Class C
Descriptor: 15S ribosomal RNA, 21S ribosomal RNA, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Desai, N, Brown, A, Amunts, A, Ramakrishnan, V.
Deposit date:2016-12-22
Release date:2017-02-15
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.97 Å)
Cite:The structure of the yeast mitochondrial ribosome.
Science, 355, 2017
5MRC
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BU of 5mrc by Molmil
Structure of the yeast mitochondrial ribosome - Class A
Descriptor: 15S ribosomal RNA, 21S ribosomal RNA, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Desai, N, Brown, A, Amunts, A, Ramakrishnan, V.
Deposit date:2016-12-22
Release date:2017-02-15
Last modified:2018-02-07
Method:ELECTRON MICROSCOPY (3.25 Å)
Cite:The structure of the yeast mitochondrial ribosome.
Science, 355, 2017
6Y85
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BU of 6y85 by Molmil
Fragment KCL_1410 in complex with MAP kinase p38-alpha
Descriptor: 1-(1-adamantylmethyl)guanidine, 4-(4-FLUOROPHENYL)-1-(4-PIPERIDINYL)-5-(2-AMINO-4-PYRIMIDINYL)-IMIDAZOLE, CALCIUM ION, ...
Authors:De Nicola, G.F, Nichols, C.E.
Deposit date:2020-03-03
Release date:2020-03-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Fragment KCL_1410 in complex with MAP kinase p38-alpha
To Be Published
5GAR
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BU of 5gar by Molmil
Thermus thermophilus V/A-ATPase, conformation 1
Descriptor: Archaeal/vacuolar-type H+-ATPase subunit I, V-type ATP synthase alpha chain, V-type ATP synthase beta chain, ...
Authors:Schep, D.G, Zhao, J, Rubinstein, J.L.
Deposit date:2016-02-05
Release date:2016-03-09
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (6.4 Å)
Cite:Models for the a subunits of the Thermus thermophilus V/A-ATPase and Saccharomyces cerevisiae V-ATPase enzymes by cryo-EM and evolutionary covariance.
Proc.Natl.Acad.Sci.USA, 113, 2016
6Y7Z
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Fragment KCL_914 in complex with MAP kinase p38-alpha
Descriptor: 1-(1-adamantyl)-3-ethyl-guanidine, 4-(4-FLUOROPHENYL)-1-(4-PIPERIDINYL)-5-(2-AMINO-4-PYRIMIDINYL)-IMIDAZOLE, CALCIUM ION, ...
Authors:De Nicola, G.F, Nichols, C.E.
Deposit date:2020-03-02
Release date:2020-03-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Fragment KCL_914 in complex with MAP kinase p38-alpha
To Be Published

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PDB entries from 2024-09-11

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