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2FGS
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BU of 2fgs by Molmil
Crystal structure of Campylobacter jejuni YCEI protein, structural genomics
Descriptor: Putative periplasmic protein, SULFATE ION
Authors:Patskovsky, Y, Ramagopal, U, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2005-12-22
Release date:2006-01-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal Structure of Campylobacter Jejuni YceI Periplasmic Protein
To be Published
7X5B
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BU of 7x5b by Molmil
Crystal structure of RuvB
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Holliday junction ATP-dependent DNA helicase RuvB
Authors:Lin, Z, Qu, Q, Zhang, X, Zhou, Z, Dai, L.
Deposit date:2022-03-04
Release date:2023-03-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Cryo-EM structure of the RuvAB-Holliday junction intermediate complex from Pseudomonas aeruginosa.
Front Plant Sci, 14, 2023
8V4G
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BU of 8v4g by Molmil
X-ray structure of the NADP-dependent reductase from Campylobacter jejuni responsible for the synthesis of CDP-glucitol in the presence of CDP and NADP
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, CYTIDINE-5'-DIPHOSPHATE, ...
Authors:Schumann, M.E, Thoden, J.B, Holden, H.M, Raushel, F.M.
Deposit date:2023-11-29
Release date:2023-12-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Biosynthesis of Cytidine Diphosphate-6-d-Glucitol for the Capsular Polysaccharides of Campylobacter jejuni.
Biochemistry, 63, 2024
8V4H
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BU of 8v4h by Molmil
X-ray structure of the NADP-dependent reductase from Campylobacter jejuni responsible for the synthesis of CDP-glucitol in the presence of CDP-glucitol
Descriptor: CHLORIDE ION, PHOSPHATE ION, Putative nucleotide sugar dehydratase, ...
Authors:Thoden, J.B, Schumann, M.E, Holden, H.M, Raushel, F.M.
Deposit date:2023-11-29
Release date:2023-12-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Biosynthesis of Cytidine Diphosphate-6-d-Glucitol for the Capsular Polysaccharides of Campylobacter jejuni.
Biochemistry, 63, 2024
7AQK
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BU of 7aqk by Molmil
Model of the actin filament Arp2/3 complex branch junction in cells
Descriptor: Actin, alpha skeletal muscle, ACTA1, ...
Authors:Faessler, F, Dimchev, G, Hodirnau, V.V, Wan, W, Schur, F.K.M.
Deposit date:2020-10-22
Release date:2020-12-02
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Cryo-electron tomography structure of Arp2/3 complex in cells reveals new insights into the branch junction.
Nat Commun, 11, 2020
3O6D
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BU of 3o6d by Molmil
Pyridoxal phosphate biosynthetic protein PdxJ from Campylobacter jejuni in complex with pyridoxine-5'-phosphate
Descriptor: PHOSPHATE ION, PYRIDOXINE-5'-PHOSPHATE, Pyridoxine 5'-phosphate synthase
Authors:Osipiuk, J, Zhou, M, Kwon, K, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2010-07-28
Release date:2010-08-11
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:X-ray crystal structure of pyridoxal phosphate biosynthetic protein PdxJ from Campylobacter jejuni.
To be Published
1S1L
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BU of 1s1l by Molmil
Influence of Groove Interactions on the Formation of DNA Holliday Junctions
Descriptor: 5'-D(*CP*CP*(OIP)*GP*TP*AP*CP*(5CM)P*GP*G)-3'
Authors:Hays, F.A, Jones, Z.J, Ho, P.S.
Deposit date:2004-01-06
Release date:2004-08-31
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Influence of minor groove substituents on the structure of DNA holliday junctions.
Biochemistry, 43, 2004
7SPL
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BU of 7spl by Molmil
[2T3] Self-assembling 3D DNA triangle with three inter-junction base pairs containing the L1 junction and a zero-linked center strand
Descriptor: 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE, DNA (5'-D(*GP*AP*C)-3'), DNA (5'-D(*TP*CP*TP*GP*AP*TP*GP*TP*CP*C)-3'), ...
Authors:Vecchioni, S, Lu, B, Sha, R, Ohayon, Y.P, Seeman, N.C.
Deposit date:2021-11-02
Release date:2022-11-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (6.09 Å)
Cite:The Rule of Thirds: Controlling Junction Chirality and Polarity in 3D DNA Tiles.
Small, 19, 2023
3O6C
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BU of 3o6c by Molmil
Pyridoxal phosphate biosynthetic protein PdxJ from Campylobacter jejuni
Descriptor: PHOSPHATE ION, Pyridoxine 5'-phosphate synthase
Authors:Osipiuk, J, Zhou, M, Kwon, K, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2010-07-28
Release date:2010-08-11
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Pyridoxal phosphate biosynthetic protein PdxJ from Campylobacter jejuni.
To be Published
5ZUO
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BU of 5zuo by Molmil
Crystal Structure of BZ junction in diverse sequence
Descriptor: DNA (5'-D(*AP*CP*GP*GP*TP*TP*TP*AP*TP*CP*GP*CP*GP*CP*GP*CP*G)-3'), DNA (5'-D(*GP*TP*CP*GP*CP*GP*CP*GP*CP*GP*AP*TP*AP*AP*AP*CP*C)-3'), Double-stranded RNA-specific adenosine deaminase
Authors:Kim, K.K, Kim, D.
Deposit date:2018-05-08
Release date:2018-08-29
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.902 Å)
Cite:Sequence preference and structural heterogeneity of BZ junctions.
Nucleic Acids Res., 46, 2018
5ZUP
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BU of 5zup by Molmil
Crystal Structure of BZ junction in diverse sequence
Descriptor: (5'-D(*AP*CP*GP*GP*TP*TP*TP*AP*TP*CP*GP*CP*GP*CP*GP*CP*G)-3'), (5'-D(*GP*TP*CP*GP*CP*GP*CP*GP*CP*AP*AP*TP*AP*AP*AP*CP*C)-3'), Double-stranded RNA-specific adenosine deaminase
Authors:Kim, K.K, Kim, D.
Deposit date:2018-05-08
Release date:2018-08-29
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Sequence preference and structural heterogeneity of BZ junctions.
Nucleic Acids Res., 46, 2018
6LW3
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BU of 6lw3 by Molmil
Crystal structure of RuvC from Pseudomonas aeruginosa
Descriptor: Crossover junction endodeoxyribonuclease RuvC
Authors:Hu, Y, He, Y, Lin, Z.
Deposit date:2020-02-07
Release date:2020-02-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Biochemical and structural characterization of the Holliday junction resolvase RuvC from Pseudomonas aeruginosa.
Biochem.Biophys.Res.Commun., 525, 2020
4ZO4
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BU of 4zo4 by Molmil
Dephospho-CoA kinase from Campylobacter jejuni.
Descriptor: BETA-MERCAPTOETHANOL, Dephospho-CoA kinase
Authors:Osipiuk, J, Zhou, M, Stam, J, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2015-05-06
Release date:2015-05-13
Last modified:2019-12-11
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Dephospho-CoA kinase from Campylobacter jejuni.
to be published
5DSA
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BU of 5dsa by Molmil
Crystal structure of Holliday junctions stabilized by 5-methylcytosine in GCC junction core
Descriptor: 5'-D(*CP*CP*GP*GP*CP*GP*5CMP*CP*GP*G)-3', CALCIUM ION
Authors:Vander Zanden, C.M, Ho, P.S.
Deposit date:2015-09-17
Release date:2016-09-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.6896 Å)
Cite:Effect of Hydroxymethylcytosine on the Structure and Stability of Holliday Junctions.
Biochemistry, 55, 2016
5DSB
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BU of 5dsb by Molmil
Crystal structure of Holliday junctions stabilized by 5-hydroxymethylcytosine in GCC junction core
Descriptor: 5'-D(*CP*CP*GP*GP*CP*GP*5HCP*CP*GP*G)-3', CALCIUM ION
Authors:Vander Zanden, C.M, Rowe, R.K, Broad, A.J, Ho, P.S.
Deposit date:2015-09-17
Release date:2016-09-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.4959 Å)
Cite:Effect of Hydroxymethylcytosine on the Structure and Stability of Holliday Junctions.
Biochemistry, 55, 2016
5ZU1
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BU of 5zu1 by Molmil
Crystal Structure of BZ junction in diverse sequence
Descriptor: DNA (5'-D(*AP*CP*GP*GP*TP*TP*TP*AP*AP*GP*GP*CP*GP*CP*GP*CP*G)-3'), DNA (5'-D(*GP*TP*CP*GP*CP*GP*CP*GP*CP*CP*TP*TP*AP*AP*AP*CP*C)-3'), Double-stranded RNA-specific adenosine deaminase
Authors:Kim, K.K, Kim, D.
Deposit date:2018-05-05
Release date:2018-08-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.009 Å)
Cite:Sequence preference and structural heterogeneity of BZ junctions.
Nucleic Acids Res., 46, 2018
6PBV
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BU of 6pbv by Molmil
Crystal structure of Fab668 complex
Descriptor: 1,2-ETHANEDIOL, Fab668 heavy chain, Fab668 light chain, ...
Authors:Oyen, D, Wilson, I.A.
Deposit date:2019-06-14
Release date:2020-03-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.566 Å)
Cite:Structure and mechanism of monoclonal antibody binding to the junctional epitope of Plasmodium falciparum circumsporozoite protein.
Plos Pathog., 16, 2020
8UZ8
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BU of 8uz8 by Molmil
Crystal Structure of CiaD from Campylobacter jejuni (C-terminal fragment, Orthorhombic P form)
Descriptor: 1,4-BUTANEDIOL, 2-oxoglutarate:acceptor oxidoreductase, CHLORIDE ION, ...
Authors:Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2023-11-14
Release date:2023-12-06
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal Structure of CiaD from Campylobacter jejuni (C-terminal fragment, Orthorhombic P form)
To be published
1AX7
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BU of 1ax7 by Molmil
SOLUTION STRUCTURE OF THE [AF]-C8-DG ADDUCT POSITIONED AT A TEMPLATE-PRIMER JUNCTION, NMR, 6 STRUCTURES
Descriptor: 2-AMINOFLUORENE, DNA DUPLEX D(AAC-[AF]G-CTACCATCC)D(GGATGGTAG)
Authors:Mao, B, Gu, Z, Gorin, A.A, Hingerty, B.E, Broyde, S, Patel, D.J.
Deposit date:1997-10-30
Release date:1998-07-01
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the aminofluorene-stacked conformer of the syn [AF]-C8-dG adduct positioned at a template-primer junction.
Biochemistry, 36, 1997
1S1K
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BU of 1s1k by Molmil
INFLUENCE OF GROOVE INTERACTIONS ON DNA HOLLIDAY JUNCTION FORMATION
Descriptor: 5'-D(*CP*CP*(1AP)P*GP*TP*AP*CP*TP*GP*G)-3', CALCIUM ION, SODIUM ION
Authors:Hays, F.A, Watson, J, Ho, P.S.
Deposit date:2004-01-06
Release date:2004-08-31
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Influence of minor groove substituents on the structure of DNA holliday junctions.
Biochemistry, 43, 2004
6M4T
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BU of 6m4t by Molmil
U shaped head to head four-way junction in d(TTCTGCTGCTGAA) sequence
Descriptor: COBALT (II) ION, DNA (5'-D(P*(UD)P*TP*CP*TP*GP*CP*TP*GP*CP*TP*GP*AP*A)-3'), N4-[4-[(6-chloranyl-2-methoxy-acridin-9-yl)amino]butyl]-1,3,5-triazine-2,4,6-triamine
Authors:Hou, M.H, Chien, C.M, Satange, R.B, Wu, P.C.
Deposit date:2020-03-09
Release date:2020-07-15
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural Basis for Targeting T:T Mismatch with Triaminotriazine-Acridine Conjugate Induces a U-Shaped Head-to-Head Four-Way Junction in CTG Repeat DNA.
J.Am.Chem.Soc., 142, 2020
6M5J
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BU of 6m5j by Molmil
U shaped head to head four-way junction in d(TTCTGCTGCTGAA/TTCTGCAGCTGAA) sequence
Descriptor: COBALT (II) ION, DNA (5'-D(P*TP*TP*CP*TP*GP*CP*AP*GP*CP*TP*GP*AP*A)-3'), DNA (5'-D(P*TP*TP*CP*TP*GP*CP*TP*GP*CP*TP*GP*AP*A)-3'), ...
Authors:Hou, M.H, Chien, C.M, Satange, R.B.
Deposit date:2020-03-11
Release date:2020-07-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural Basis for Targeting T:T Mismatch with Triaminotriazine-Acridine Conjugate Induces a U-Shaped Head-to-Head Four-Way Junction in CTG Repeat DNA.
J.Am.Chem.Soc., 142, 2020
1P54
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BU of 1p54 by Molmil
Effect of Sequence on the Conformational Geometry of DNA Holliday Junctions
Descriptor: 5'-D(*CP*CP*AP*GP*TP*AP*CP*(BRU)P*GP*G)-3', CALCIUM ION, SODIUM ION
Authors:Hays, F.A, Vargason, J.M, Ho, P.S.
Deposit date:2003-04-25
Release date:2003-09-02
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Effect of Sequence on the Conformation of DNA Holliday Junctions
Biochemistry, 42, 2003
5H1R
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BU of 5h1r by Molmil
C. elegans INX-6 gap junction channel
Descriptor: Innexin-6
Authors:Oshima, A, Tani, K, Fujiyoshi, Y.
Deposit date:2016-10-11
Release date:2016-12-07
Last modified:2017-02-01
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Atomic structure of the innexin-6 gap junction channel determined by cryo-EM
Nat Commun, 7, 2016
5H1Q
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BU of 5h1q by Molmil
C. elegans INX-6 gap junction hemichannel
Descriptor: Innexin-6
Authors:Oshima, A, Tani, K, Fujiyoshi, Y.
Deposit date:2016-10-11
Release date:2016-12-07
Last modified:2017-02-15
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Atomic structure of the innexin-6 gap junction channel determined by cryo-EM
Nat Commun, 7, 2016

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