PDB: 66478 resultsInfo pagesStatus searchChemie searchBIRD

---

7Z8B	Structure of CRL7FBXW8 reveals coupling with CUL1-RBX1/ROC1 for multi-cullin-RING E3-catalyzed ubiquitin ligation Descriptor: Cullin-7, E3 ubiquitin-protein ligase RBX1, F-box/WD repeat-containing protein 8, ... Authors: Hopf, L.V.M, Schulman, B.A. Deposit date: 2022-03-17 Release date: 2022-08-24 Last modified: 2024-07-24 Method: ELECTRON MICROSCOPY (2.8 Å) Cite: Structure of CRL7 FBXW8 reveals coupling with CUL1-RBX1/ROC1 for multi-cullin-RING E3-catalyzed ubiquitin ligation. Nat.Struct.Mol.Biol., 29, 2022
7Z7H	Structure of P. luminescens TccC3-F-actin complex Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5-DIPHOSPHORIBOSE, Actin, ... Authors: Belyy, A, Raunser, S. Deposit date: 2022-03-15 Release date: 2022-06-29 Last modified: 2023-03-15 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: Mechanism of threonine ADP-ribosylation of F-actin by a Tc toxin. Nat Commun, 13, 2022
7Z7I	Structure of ADP-ribosylated F-actin Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5-DIPHOSPHORIBOSE, Actin, ... Authors: Belyy, A, Raunser, S. Deposit date: 2022-03-15 Release date: 2022-06-29 Last modified: 2023-03-15 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Mechanism of threonine ADP-ribosylation of F-actin by a Tc toxin. Nat Commun, 13, 2022
7Z6Q	Cryo-EM structure of the whole photosynthetic complex from the green sulfur bacteria Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, BACTERIOCHLOROPHYLL A, Bacteriochlorophyll A isomer, ... Authors: Xie, H, Tsiotis, G. Deposit date: 2022-03-14 Release date: 2023-02-08 Method: ELECTRON MICROSCOPY (2.5 Å) Cite: Cryo-EM structure of the whole photosynthetic reaction center apparatus from the green sulfur bacterium Chlorobaculum tepidum. Proc.Natl.Acad.Sci.USA, 120, 2023
7ZE5	Occ(apo/return) conformation of CydDC mutant (E500Q.C) in ATP(CydC)/AMP-PNP(CydD) bound state (Dataset-23) Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ATP-binding/permease protein CydC, ATP-binding/permease protein CydD, ... Authors: Wu, D, Safarian, S. Deposit date: 2022-03-30 Release date: 2023-04-19 Last modified: 2023-11-01 Method: ELECTRON MICROSCOPY (2.94 Å) Cite: Dissecting the conformational complexity and mechanism of a bacterial heme transporter. Nat.Chem.Biol., 19, 2023
7ZBW	CAND1-SCF-SKP2 CAND1 rolling-2 SCF engaged Descriptor: Cullin-1, Cullin-associated NEDD8-dissociated protein 1, E3 ubiquitin-protein ligase RBX1, ... Authors: Baek, K, Schulman, B.A. Deposit date: 2022-03-24 Release date: 2023-04-19 Last modified: 2024-07-24 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Systemwide disassembly and assembly of SCF ubiquitin ligase complexes. Cell, 186, 2023
7ZDW	IF(heme/confined) conformation of CydDC mutant (E500Q.C) in AMP-PNP(CydD) bound state (Dataset-22) Descriptor: ATP-binding/permease protein CydC, ATP-binding/permease protein CydD, HEME B/C, ... Authors: Wu, D, Safarian, S. Deposit date: 2022-03-29 Release date: 2023-04-19 Last modified: 2023-11-01 Method: ELECTRON MICROSCOPY (3.35 Å) Cite: Dissecting the conformational complexity and mechanism of a bacterial heme transporter. Nat.Chem.Biol., 19, 2023
7Z8V	CAND1-SCF-SKP2 (SKP1deldel) CAND1 engaged SCF rocked Descriptor: Cullin-1, Cullin-associated NEDD8-dissociated protein 1, E3 ubiquitin-protein ligase RBX1, ... Authors: Baek, K, Schulman, B.A. Deposit date: 2022-03-18 Release date: 2023-04-19 Last modified: 2024-07-24 Method: ELECTRON MICROSCOPY (2.7 Å) Cite: Systemwide disassembly and assembly of SCF ubiquitin ligase complexes. Cell, 186, 2023
7ZDK	IF(apo/asym) conformation of CydDC in AMP-PNP(CydC)/AMP-PNP(CydD) bound state (Dataset-8) Descriptor: ATP-binding/permease protein CydC, ATP-binding/permease protein CydD, MAGNESIUM ION, ... Authors: Wu, D, Safarian, S. Deposit date: 2022-03-29 Release date: 2023-04-19 Last modified: 2023-11-01 Method: ELECTRON MICROSCOPY (3.01 Å) Cite: Dissecting the conformational complexity and mechanism of a bacterial heme transporter. Nat.Chem.Biol., 19, 2023
7ZDU	Occ(apo/return) conformation of CydDC mutant (E500Q.C) in ATP(CydC)/ATP(CydD) bound state (Dataset-19) Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ATP-binding/permease protein CydC, ATP-binding/permease protein CydD, ... Authors: Wu, D, Safarian, S. Deposit date: 2022-03-29 Release date: 2023-04-19 Last modified: 2023-11-01 Method: ELECTRON MICROSCOPY (2.98 Å) Cite: Dissecting the conformational complexity and mechanism of a bacterial heme transporter. Nat.Chem.Biol., 19, 2023
7ZDC	IF(heme/confined) conformation of CydDC in ADP(CydD) bound state (Dataset-3) Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-binding/permease protein CydC, ATP-binding/permease protein CydD, ... Authors: Wu, D, Safarian, S. Deposit date: 2022-03-29 Release date: 2023-04-19 Last modified: 2023-11-01 Method: ELECTRON MICROSCOPY (3.13 Å) Cite: Dissecting the conformational complexity and mechanism of a bacterial heme transporter. Nat.Chem.Biol., 19, 2023
7ZD5	IF(apo/as isolated) conformation of CydDC (Dataset-1) Descriptor: ATP-binding/permease protein CydC, ATP-binding/permease protein CydD Authors: Wu, D, Safarian, S. Deposit date: 2022-03-29 Release date: 2023-04-19 Last modified: 2023-11-01 Method: ELECTRON MICROSCOPY (3.17 Å) Cite: Dissecting the conformational complexity and mechanism of a bacterial heme transporter. Nat.Chem.Biol., 19, 2023
7ZGU	Human NLRP3-deltaPYD hexamer Descriptor: ADENOSINE-5'-DIPHOSPHATE, NACHT, LRR and PYD domains-containing protein 3 Authors: Raisch, T, Machtens, D.A, Bresch, I.B, Eberhage, J, Prumbaum, D, Reubold, T.F, Raunser, S, Eschenburg, S. Deposit date: 2022-04-04 Release date: 2022-05-18 Last modified: 2024-07-24 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Cryo-EM structure of the NEK7-independent NLRP3 inflammasome To Be Published
7ZMG	CryoEM structure of mitochondrial complex I from Chaetomium thermophilum (state 1) Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ... Authors: Laube, E, Kuehlbrandt, W. Deposit date: 2022-04-19 Release date: 2022-11-30 Last modified: 2022-12-07 Method: ELECTRON MICROSCOPY (2.44 Å) Cite: Conformational changes in mitochondrial complex I of the thermophilic eukaryote Chaetomium thermophilum. Sci Adv, 8, 2022
7ZMB	CryoEM structure of mitochondrial complex I from Chaetomium thermophilum (state 2) Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ... Authors: Laube, E, Kuehlbrandt, W. Deposit date: 2022-04-19 Release date: 2022-11-30 Last modified: 2022-12-07 Method: ELECTRON MICROSCOPY (2.75 Å) Cite: Conformational changes in mitochondrial complex I of the thermophilic eukaryote Chaetomium thermophilum. Sci Adv, 8, 2022
7ZS0	Diheme cytochrome c Kustd1711 from Kuenenia stuttgartiensis Descriptor: CALCIUM ION, GLYCEROL, HEME C, ... Authors: Akram, M, Barends, T. Deposit date: 2022-05-05 Release date: 2023-05-17 Method: X-RAY DIFFRACTION (1.75 Å) Cite: Redox potential tuning by calcium ions in a novel c-type cytochrome from an anammox organism To Be Published
7ZS1	Diheme cytochrome c Kustd1711 from Kuenenia stuttgartiensis, M292C mutant Descriptor: CALCIUM ION, GLYCEROL, HEME C, ... Authors: Akram, M, Barends, T. Deposit date: 2022-05-05 Release date: 2023-05-17 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Redox potential tuning by calcium ions in a novel c-type cytochrome from an anammox organism To Be Published
7ZS2	Diheme cytochrome c Kustd1711 from Kuenenia stuttgartiensis, M292H mutant Descriptor: CALCIUM ION, HEME C, Hypothetical (Diheme) protein Authors: Akram, M, Barends, T. Deposit date: 2022-05-05 Release date: 2023-05-17 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (1.12 Å) Cite: Redox potential tuning by calcium ions in a novel c-type cytochrome from an anammox organism To Be Published
8A8G	ATP sulfurylase from Methanothermococcus thermolithotrophicus - orthorhombic form Descriptor: ATP sulfurylase from Methanothermococcus thermolithotrophicus, GLYCEROL, ZINC ION Authors: Jespersen, M, Wagner, T. Deposit date: 2022-06-23 Release date: 2023-04-26 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.97 Å) Cite: Assimilatory sulfate reduction in the marine methanogen Methanothermococcus thermolithotrophicus. Nat Microbiol, 8, 2023
8A8H	APS kinase from Methanothermococcus thermolithotrophicus refined to 1.77 A Descriptor: 1,2-ETHANEDIOL, APS kinase from Methanothermococcus thermolithotrophicus, CHLORIDE ION, ... Authors: Jespersen, M, Wagner, T. Deposit date: 2022-06-23 Release date: 2023-04-26 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.77 Å) Cite: Assimilatory sulfate reduction in the marine methanogen Methanothermococcus thermolithotrophicus. Nat Microbiol, 8, 2023
8A8D	ATP sulfurylase from Methanothermococcus thermolithotrophicus - monoclinic form Descriptor: 1,2-ETHANEDIOL, ACETATE ION, ATP sulfurylase from Methanothermococcus thermolithotrophicus, ... Authors: Jespersen, M, Wagner, T. Deposit date: 2022-06-22 Release date: 2023-04-26 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Assimilatory sulfate reduction in the marine methanogen Methanothermococcus thermolithotrophicus. Nat Microbiol, 8, 2023
8A8O	PAPS reductase from Methanothermococcus thermolithotrophicus refined to 1.45 A Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, Alpha-subunit of the PAPS reductase from Methanothermococcus thermolithotrophicus, ... Authors: Jespersen, M, Wagner, T. Deposit date: 2022-06-23 Release date: 2023-04-26 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.45 Å) Cite: Assimilatory sulfate reduction in the marine methanogen Methanothermococcus thermolithotrophicus. Nat Microbiol, 8, 2023
8A8K	PAP phosphatase from Methanothermococcus thermolithotrophicus refined to 3.1 A Descriptor: ADENOSINE MONOPHOSPHATE, GLYCEROL, MANGANESE (II) ION, ... Authors: Jespersen, M, Wagner, T. Deposit date: 2022-06-23 Release date: 2023-04-26 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Assimilatory sulfate reduction in the marine methanogen Methanothermococcus thermolithotrophicus. Nat Microbiol, 8, 2023
7ZJV	Structure of human USPL1 in covalent complex with DeltaN-SUMO2/3-PA probe Descriptor: CHLORIDE ION, SUMO-specific isopeptidase USPL1, Small ubiquitin-related modifier 2, ... Authors: Zhao, Z, Gersch, M. Deposit date: 2022-04-12 Release date: 2023-09-27 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Native Semisynthesis of Isopeptide-Linked Substrates for Specificity Analysis of Deubiquitinases and Ubl Proteases. J.Am.Chem.Soc., 145, 2023
7ZJU	Structure of human USPL1 in covalent complex with SUMO3-2Br probe Descriptor: 2-bromanylethanamine, CALCIUM ION, CHLORIDE ION, ... Authors: Zhao, Z, Gersch, M. Deposit date: 2022-04-12 Release date: 2023-09-27 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.17 Å) Cite: Native Semisynthesis of Isopeptide-Linked Substrates for Specificity Analysis of Deubiquitinases and Ubl Proteases. J.Am.Chem.Soc., 145, 2023

<210211212213214215216217218219220221222223224225>