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7SAK	Crystal Structure of LaM4 Nanobody bound to mCherry Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, LaM4, ... Authors: Cong, A.T.Q, Schellenberg, M.J. Deposit date: 2021-09-22 Release date: 2022-09-14 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.15 Å) Cite: High-efficiency recombinant protein purification using mCherry and YFP nanobody affinity matrices. Protein Sci., 31, 2022
1OXD	Expansion of the Genetic Code Enables Design of a Novel "Gold" Class of Green Fluorescent Proteins Descriptor: cyan fluorescent protein cfp Authors: Hyun Bae, J, Rubini, M, Jung, G, Wiegand, G, Seifert, M.H, Azim, M.K, Kim, J.S, Zumbusch, A, Holak, T.A, Moroder, L, Huber, R, Budisa, N. Deposit date: 2003-04-02 Release date: 2003-12-02 Last modified: 2021-10-27 Method: X-RAY DIFFRACTION (1.15 Å) Cite: Expansion of the Genetic Code Enables Design of a Novel "Gold" Class of Green Fluorescent Proteins J.Mol.Biol., 328, 2003
6OFK	Crystal structure of green fluorescent protein (GFP); S65T; ih circular permutant (50-51) Descriptor: ACETATE ION, Green Fluorescent Protein (GFP); S65T; ih circular permutant (50-51) Authors: Lin, C.-Y, Romei, M.G, Mathews, I.I, Boxer, S.G. Deposit date: 2019-03-30 Release date: 2019-07-10 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.15 Å) Cite: Unified Model for Photophysical and Electro-Optical Properties of Green Fluorescent Proteins. J.Am.Chem.Soc., 141, 2019
2AWK	GFP R96M mature chromophore Descriptor: MAGNESIUM ION, green fluorescent protein Authors: Wood, T.I, Barondeau, D.P, Hitomi, C, Kassmann, C.J, Tainer, J.A, Getzoff, E.D. Deposit date: 2005-09-01 Release date: 2006-04-18 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.15 Å) Cite: Defining the role of arginine 96 in green fluorescent protein fluorophore biosynthesis. Biochemistry, 44, 2005
2WSO	Structure of Cerulean Fluorescent Protein at physiological pH Descriptor: GREEN FLUORESCENT PROTEIN Authors: Lelimousin, M, Noirclerc-Savoye, M, Lazareno-Saez, C, Paetzold, B, Le Vot, S, Chazal, R, Macheboeuf, P, Field, M.J, Bourgeois, D, Royant, A. Deposit date: 2009-09-08 Release date: 2009-09-29 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.15 Å) Cite: Intrinsic Dynamics in Ecfp and Cerulean Control Fluorescence Quantum Yield. Biochemistry, 48, 2009
1OXE	Expansion of the Genetic Code Enables Design of a Novel "Gold" Class of Green Fluorescent Proteins Descriptor: cyan fluorescent protein cfp Authors: Hyun Bae, J, Rubini, M, Jung, G, Wiegand, G, Seifert, M.H, Azim, M.K, Kim, J.S, Zumbusch, A, Holak, T.A, Moroder, L, Huber, R, Budisa, N. Deposit date: 2003-04-02 Release date: 2003-12-02 Last modified: 2021-10-27 Method: X-RAY DIFFRACTION (1.15 Å) Cite: Expansion of the Genetic Code Enables Design of a Novel "Gold" Class of Green Fluorescent Proteins J.Mol.Biol., 328, 2003
2X9N	High resolution structure of TbPTR1 in complex with cyromazine Descriptor: (4S,5S)-1,2-DITHIANE-4,5-DIOL, ACETATE ION, DITHIANE DIOL, ... Authors: Dawson, A, Tulloch, L.B, Barrack, K.L, Hunter, W.N. Deposit date: 2010-03-23 Release date: 2010-06-30 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.15 Å) Cite: High-Resolution Structures of Trypanosoma Brucei Pteridine Reductase Ligand Complexes Inform on the Placement of New Molecular Entities in the Active Site of a Potential Drug Target Acta Crystallogr.,Sect.D, 66, 2010
7QLI	Cis structure of rsKiiro at 290 K Descriptor: GLYCEROL, SULFATE ION, rsKiiro Authors: van Thor, J.J, Baxter, J.M. Deposit date: 2021-12-20 Release date: 2023-07-05 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.155 Å) Cite: Optical control of ultrafast structural dynamics in a fluorescent protein. Nat.Chem., 15, 2023
3SRY	Engineered high-affinity halide-binding protein derived from YFP: halide-free Descriptor: Green fluorescent protein Authors: Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W. Deposit date: 2011-07-07 Release date: 2012-07-11 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.159 Å) Cite: Determination of engineered chloride-binding site structures in fluorescent proteins reveals principles of halide recognition To be Published
5OXA	Structure of the S205A mutant of the Cyan Fluorescent Protein Cerulean at pH 7.0 Descriptor: Green fluorescent protein Authors: Gotthard, G, von Stetten, D, Clavel, D, Noirclerc-Savoye, M, Royant, A. Deposit date: 2017-09-06 Release date: 2017-11-29 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.16 Å) Cite: Chromophore Isomer Stabilization Is Critical to the Efficient Fluorescence of Cyan Fluorescent Proteins. Biochemistry, 56, 2017
6OGC	Crystal structure of Green Fluorescent Protein (GFP); S65T, Y66(2,3-F2Y), H148D; circular permutant (50-51) Descriptor: Crystal structure of Green Fluorescent Protein (GFP); S65T, Y66(2,3-F2Y), H148D; circular permutant (50-51) Authors: Lin, C.-Y, Boxer, S.G. Deposit date: 2019-04-02 Release date: 2020-04-08 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.178 Å) Cite: Unusual Spectroscopic and Electric Field Sensitivity of Chromophores with Short Hydrogen Bonds: GFP and PYP as Model Systems. J.Phys.Chem.B, 124, 2020
4RYS	Crystal structure of the green fluorescent rotein NowGFP (the variant of cyan Cerulean) at pH 4.8 Descriptor: GLYCEROL, NowGFP Authors: Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V. Deposit date: 2014-12-17 Release date: 2015-09-02 Last modified: 2023-12-06 Method: X-RAY DIFFRACTION (1.18 Å) Cite: Structure of the green fluorescent protein NowGFP with an anionic tryptophan-based chromophore. Acta Crystallogr.,Sect.D, 71, 2015
5G3Y	Crystal structure of adenylate kinase ancestor 1 with Zn and ADP bound Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENYLATE KINSE, ZINC ION Authors: Nguyen, V, Kutter, S, English, J, Kern, D. Deposit date: 2016-05-03 Release date: 2016-12-28 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.18 Å) Cite: Evolutionary drivers of thermoadaptation in enzyme catalysis. Science, 355, 2017
2HQK	Crystal structure of a monomeric cyan fluorescent protein derived from Clavularia Descriptor: ACETATE ION, CHLORIDE ION, Cyan fluorescent chromoprotein, ... Authors: Henderson, J.N, Campbell, R.E, Ai, H, Remington, S.J. Deposit date: 2006-07-18 Release date: 2007-01-02 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.19 Å) Cite: Directed evolution of a monomeric, bright and photostable version of Clavularia cyan fluorescent protein: structural characterization and applications in fluorescence imaging. Biochem.J., 400, 2006
3ST0	Engineered medium-affinity halide-binding protein derived from YFP: halide-free Descriptor: 1,2-ETHANEDIOL, FORMIC ACID, Green fluorescent protein Authors: Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W. Deposit date: 2011-07-08 Release date: 2012-07-11 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (1.19 Å) Cite: Visualization of Synaptic Inhibition with an Optogenetic Sensor Developed by Cell-Free Protein Engineering Automation. J.Neurosci., 33, 2013
4XOV	Structure of rsGreen0.7 in the green-off-state Descriptor: rsGreen0.7 Authors: De Zitter, E, Van Meervelt, L. Deposit date: 2015-01-16 Release date: 2015-09-09 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.2 Å) Cite: Expression-Enhanced Fluorescent Proteins Based on Enhanced Green Fluorescent Protein for Super-resolution Microscopy. Acs Nano, 9, 2015
4EET	Crystal structure of iLOV Descriptor: FLAVIN MONONUCLEOTIDE, Phototropin-2 Authors: Hitomi, K, Christie, J.M, Arvai, A.S, Hartfield, K.A, Pratt, A.J, Tainer, J.A, Getzoff, E.D. Deposit date: 2012-03-28 Release date: 2012-05-16 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.2 Å) Cite: Structural Tuning of the Fluorescent Protein iLOV for Improved Photostability. J.Biol.Chem., 287, 2012
2QZ0	Mature Q183E variant of Green Fluorescent Protein Chromophore Descriptor: Green fluorescent protein, MAGNESIUM ION Authors: Wood, T.I, Barondeau, D.P, Hitomi, C, Tainer, J.A, Getzoff, E.D. Deposit date: 2007-08-15 Release date: 2009-04-21 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.2 Å) Cite: Kinetically Isolated Reaction Intermediates Provide Structural Characterization of the GFP Fluorophore Biosynthesis Pathway To be Published
6G7Q	Trichodesmium Tery_3377 (IdiA) (FutA) in complex with iron and citrate ligands. Descriptor: CHLORIDE ION, CITRATE ANION, Extracellular solute-binding protein, ... Authors: Machelett, M.M, Tews, I. Deposit date: 2018-04-06 Release date: 2018-09-12 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.2 Å) Cite: Structural and functional characterization of IdiA/FutA (Tery_3377), an iron-binding protein from the ocean diazotrophTrichodesmium erythraeum. J. Biol. Chem., 293, 2018
7A7N	rsGreen0.7b in the green-off state Descriptor: Green fluorescent protein Authors: De Zitter, E, Dedecker, P, Van Meervelt, L. Deposit date: 2020-08-30 Release date: 2021-02-17 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.2 Å) Cite: Structure-Function Dataset Reveals Environment Effects within a Fluorescent Protein Model System*. Angew.Chem.Int.Ed.Engl., 60, 2021
4L1I	Crystal structure of EGFP-based Calcium Sensor CatchER complexed with Ca Descriptor: CALCIUM ION, EGFP-based Calcium Sensor CatchER Authors: Zhang, Y, Weber, I.T. Deposit date: 2013-06-03 Release date: 2013-12-11 Last modified: 2023-12-06 Method: X-RAY DIFFRACTION (1.2 Å) Cite: Structural basis for a hand-like site in the calcium sensor CatchER with fast kinetics. Acta Crystallogr.,Sect.D, 69, 2013
1JG1	Crystal Structure of L-isoaspartyl (D-aspartyl) O-methyltransferase with S-ADENOSYL-L-HOMOCYSTEINE Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, protein-L-isoaspartate O-methyltransferase Authors: Griffith, S.C, Sawaya, M.R, Boutz, D, Thapar, N, Katz, J, Clarke, S, Yeates, T.O. Deposit date: 2001-06-22 Release date: 2001-11-16 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.2 Å) Cite: Crystal structure of a protein repair methyltransferase from Pyrococcus furiosus with its L-isoaspartyl peptide substrate. J.Mol.Biol., 313, 2001
6M9Z	X-ray Structure of Branchiostoma floridae fluorescent protein lanFP6G Descriptor: Fluorescent protein lanFP6G Authors: Muslinkina, L, Pletneva, N, Pletnev, V, Pletnev, S. Deposit date: 2018-08-24 Release date: 2019-04-03 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.2 Å) Cite: Structural Factors Enabling Successful GFP-Like Proteins with Alanine as the Third Chromophore-Forming Residue. J. Mol. Biol., 431, 2019
2HFC	Structure of S65T Y66F R96A GFP variant in precursor state Descriptor: Green fluorescent protein, MAGNESIUM ION Authors: Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D. Deposit date: 2006-06-23 Release date: 2007-03-27 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.2 Å) Cite: The Case of the Missing Ring: Radical Cleavage of a Carbon-Carbon Bond and Implications for GFP Chromophore Biosynthesis J.Am.Chem.Soc., 129, 2007
2DUH	crystal structure of a green fluorescent protein variant S65T/H148N at pH 9.5 Descriptor: Green fluorescent protein Authors: Shu, X, Remington, S.J. Deposit date: 2006-07-23 Release date: 2007-07-10 Last modified: 2024-07-10 Method: X-RAY DIFFRACTION (1.2 Å) Cite: Ultrafast excited-state dynamics in the green fluorescent protein variant S65T/H148D. 1. Mutagenesis and structural studies. Biochemistry, 46, 2007

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