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8JK1
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BU of 8jk1 by Molmil
Crystal structure of QA-hNTAQ1 C28S
Descriptor: Protein N-terminal glutamine amidohydrolase
Authors:Kang, J.M, Han, B.W.
Deposit date:2023-05-31
Release date:2024-06-26
Method:X-RAY DIFFRACTION (2.067 Å)
Cite:Structural study for substrate recognition of human N-terminal glutamine amidohydrolase 1 in the arginine N-degron pathway.
Protein Sci., 33, 2024
6O24
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BU of 6o24 by Molmil
Crystal structure of 4498 Fab in complex with circumsporozoite protein NANP3 and anti-Kappa VHH domain
Descriptor: 1,2-ETHANEDIOL, 4498 Fab heavy chain, 4498 Kappa light chain, ...
Authors:Scally, S.W, Bosch, A, Prieto, K, Murugan, R, Wardemann, H, Julien, J.P.
Deposit date:2019-02-22
Release date:2020-07-01
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Evolution of protective human antibodies against Plasmodium falciparum circumsporozoite protein repeat motifs.
Nat. Med., 26, 2020
9G0Y
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BU of 9g0y by Molmil
Human KRas4A (GDP) in complex with compound 11
Descriptor: 1,2-ETHANEDIOL, GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Schuettelkopf, A.W.
Deposit date:2024-07-09
Release date:2025-04-16
Last modified:2025-05-21
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Reversible Small Molecule Multivariant Ras Inhibitors Display Tunable Affinity for the Active and Inactive Forms of Ras.
J.Med.Chem., 68, 2025
7Q9R
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BU of 7q9r by Molmil
Cocrystal structure of PDE6D bound to NRAS peptide
Descriptor: 1,2-ETHANEDIOL, FARNESYL, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, ...
Authors:Yelland, T, Ismail, S.
Deposit date:2021-11-14
Release date:2022-01-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Stabilization of the RAS:PDE6D Complex Is a Novel Strategy to Inhibit RAS Signaling.
J.Med.Chem., 65, 2022
6WCV
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BU of 6wcv by Molmil
Tartryl-CoA bound to human GTP-specific succinyl-CoA synthetase
Descriptor: (3S,5S,9R,20R,21R)-1-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]-3,5,9,20, 21-pentahydroxy-8,8-dimethyl-10,14,19-trioxo-2,4,6-trioxa-18-thia-11,15-diaza-3,5-diphosphadocosan-22-oic acid 3,5-dioxide (non-preferred name), Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, ...
Authors:Huang, J, Fraser, M.E.
Deposit date:2020-03-31
Release date:2020-07-15
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Tartryl-CoA inhibits succinyl-CoA synthetase
Acta Crystallogr.,Sect.F, 76, 2020
7QU3
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BU of 7qu3 by Molmil
X-ray structure of FAD domain of NqrF of Pseudomonas aeruginosa
Descriptor: 4-(benzimidazol-1-ylmethyl)benzenecarbonitrile, DIMETHYL SULFOXIDE, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Stegmann, D, Steuber, J, Fritz, G.
Deposit date:2022-01-17
Release date:2022-02-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Fast fragment- and compound-screening pipeline at the Swiss Light Source.
Acta Crystallogr D Struct Biol, 78, 2022
6NLX
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BU of 6nlx by Molmil
Crystal Structure of Glyceraldehyde-3-phosphate Dehydrogenase from Naegleria fowleri with bound NAD
Descriptor: 1,2-ETHANEDIOL, Glyceraldehyde-3-phosphate Dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2019-01-09
Release date:2019-01-23
Last modified:2025-10-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Glyceraldehyde-3-phosphate Dehydrogenase from Naegleria fowleri with bound NAD
to be published
7THH
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BU of 7thh by Molmil
SUD-C and Ubl2 domains of SARS CoV-2 Nsp3 protein
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, HEXAETHYLENE GLYCOL, ...
Authors:Osipiuk, J, Jedrzejczak, R, Endres, M, Wydorski, P, Joachimiak, L, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2022-01-11
Release date:2022-01-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:SUD-C and Ubl2 domains of SARS CoV-2 Nsp3 protein
to be published
8OF7
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BU of 8of7 by Molmil
Cyc15 Diels Alderase
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Back, C.R, Barringer, R.W.L, Zorn, K, Manzo-Ruiz, M, Race, P.R.
Deposit date:2023-03-14
Release date:2023-06-21
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Interrogation of an Enzyme Library Reveals the Catalytic Plasticity of Naturally Evolved [4+2] Cyclases.
Chembiochem, 24, 2023
7Q63
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BU of 7q63 by Molmil
The tandem SH2 domains of SYK
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Bradshaw, W.J, Katis, V.L, Chen, Z, Bountra, C, von Delft, F, Gileadi, O, Brennan, P.E.
Deposit date:2021-11-05
Release date:2021-11-24
Last modified:2025-01-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The mechanism of allosteric activation of SYK kinase derived from multiple phospho-ITAM-bound structures.
Structure, 32, 2024
5HC3
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BU of 5hc3 by Molmil
The structure of esterase Est22
Descriptor: GLYCEROL, Lipolytic enzyme
Authors:Li, J, Huang, J.
Deposit date:2016-01-04
Release date:2017-01-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural insights of a hormone sensitive lipase homologue Est22.
Sci Rep, 6, 2016
7Q5T
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BU of 7q5t by Molmil
The tandem SH2 domains of SYK with a bound FCER1G diphospho-ITAM peptide
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, High affinity immunoglobulin epsilon receptor subunit gamma, ...
Authors:Bradshaw, W.J, Katis, V.L, Chen, Z, Bountra, C, von Delft, F, Gileadi, O, Brennan, P.E.
Deposit date:2021-11-04
Release date:2021-11-24
Last modified:2025-01-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The mechanism of allosteric activation of SYK kinase derived from multiple phospho-ITAM-bound structures.
Structure, 32, 2024
9KNP
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BU of 9knp by Molmil
X-ray structure of Pyrococcus horikoshii OT3 alcohol dehydrogenase
Descriptor: 1-BUTANOL, 375aa long hypothetical alchol dehydrogenase, NICKEL (II) ION, ...
Authors:Kamitori, S, Nakamura, N.
Deposit date:2024-11-19
Release date:2025-11-05
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:X-ray structure of Pyrococcus horikoshii OT3 alcohol dehydrogenase
To Be Published
7BQJ
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BU of 7bqj by Molmil
The structure of PdxI
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Methyltransf_2 domain-containing protein, ...
Authors:Cai, Y.J, Ohashi, M, Zhou, J.H, Tang, Y.
Deposit date:2020-03-24
Release date:2020-10-14
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:An enzymatic Alder-ene reaction.
Nature, 586, 2020
7BGZ
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BU of 7bgz by Molmil
Mutant L39K of recombinant beta-lactoglobulin in complex with endogenous ligand
Descriptor: 1,2-ETHANEDIOL, Beta-lactoglobulin, DECANOIC ACID
Authors:Loch, J.I, Siuda, M.K, Lewinski, K.
Deposit date:2021-01-09
Release date:2021-01-27
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:Interactions of new lactoglobulin variants with tetracaine: crystallographic studies of ligand binding to lactoglobulin mutants possessing single substitution in the binding pocket.
Acta Biochim.Pol., 68, 2021
9MZT
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BU of 9mzt by Molmil
F pilus filament from conjugative plasmid pED208
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, Pilin
Authors:Lea, S, Deme, J, Lungren, C.A.K.
Deposit date:2025-01-23
Release date:2025-04-16
Method:ELECTRON MICROSCOPY (2.11 Å)
Cite:F pilus filament from conjugative plasmid pED208
To Be Published
8X92
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BU of 8x92 by Molmil
Crystal structure of ROCK2 with GNS-2666 inhibitor
Descriptor: Rho-associated protein kinase 2, SULFATE ION, ~{N}-methyl-3-[[6-(2-methylpyrazol-3-yl)-1-oxidanylidene-isoquinolin-2-yl]methyl]benzamide
Authors:Park, T.H, Bong, S.M, Lee, S.J, Lee, B.I.
Deposit date:2023-11-29
Release date:2024-12-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:crystal structure of rock2 with GNS-2666 inhibitor
To Be Published
7Q7W
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BU of 7q7w by Molmil
JAK2 in complex with 4-(2-{[5-(dimethylamino)pentyl]amino}-8-{[(2S)-1-hydroxypropan-2-yl]amino}quinazolin-6-yl)-5-ethyl-2-fluorophenol
Descriptor: 4-[2-[5-(dimethylamino)pentylamino]-8-[[(2~{S})-1-oxidanylpropan-2-yl]amino]quinazolin-6-yl]-5-ethyl-2-fluoranyl-phenol, Tyrosine-protein kinase JAK2
Authors:Rowland, P.
Deposit date:2021-11-09
Release date:2022-02-02
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Investigation of Janus Kinase (JAK) Inhibitors for Lung Delivery and the Importance of Aldehyde Oxidase Metabolism.
J.Med.Chem., 65, 2022
6O34
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BU of 6o34 by Molmil
Crystal Structure Analysis of PIN1
Descriptor: GLYCEROL, NONAETHYLENE GLYCOL, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1, ...
Authors:Seo, H.-S, Dhe-Paganon, S.
Deposit date:2019-02-25
Release date:2020-02-26
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Crystal Structure Analysis of PIN1
To be Published
8UIP
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BU of 8uip by Molmil
Cryo-EM Structure of Human Ninjurin1 curved oligomer
Descriptor: Ninjurin-1
Authors:David, L, Wu, H.
Deposit date:2023-10-10
Release date:2024-05-01
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:NINJ1 mediates plasma membrane rupture by cutting and releasing membrane disks.
Cell, 187, 2024
9MFR
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BU of 9mfr by Molmil
Cat DHX9 in Complex with Compound 23 and ADP
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, ...
Authors:Lockbaum, G.J, Lee, Y.-T, Sickmier, E.A, Boriack-Sjodin, P.A, Grigoriu, S.
Deposit date:2024-12-10
Release date:2025-05-07
Last modified:2025-05-21
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Discovery of ATX968: An Orally Available Allosteric Inhibitor of DHX9.
J.Med.Chem., 68, 2025
7QGO
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BU of 7qgo by Molmil
Human CD73 (ecto 5'-nucleotidase) in complex with MRS4602 (a 3-methyl-CMPCP derivative, compound 21 in paper) in the closed state (crystal form III)
Descriptor: 5'-nucleotidase, ZINC ION, [[(2~{R},3~{S},4~{R},5~{R})-5-[(4~{E})-4-[(4-methoxycarbonylphenyl)methoxyimino]-3-methyl-2-oxidanylidene-pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]methylphosphonic acid
Authors:Strater, N.
Deposit date:2021-12-09
Release date:2022-02-16
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.206 Å)
Cite:Structure-Activity Relationship of 3-Methylcytidine-5'-alpha , beta-methylenediphosphates as CD73 Inhibitors.
J.Med.Chem., 65, 2022
6ZQ7
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BU of 6zq7 by Molmil
Crystal structure of Chaetomium thermophilum Glycerol Kinase in I222 space group
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Glycerol kinase-like protein
Authors:Wilk, P, Wator, E, Grudnik, P.
Deposit date:2020-07-09
Release date:2020-12-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.421 Å)
Cite:Structural Characterization of Glycerol Kinase from the Thermophilic Fungus Chaetomium thermophilum .
Int J Mol Sci, 21, 2020
8EHB
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BU of 8ehb by Molmil
Structure of Tannerella forsythia selenomethionine-derivatized potempin D mutant I53M
Descriptor: 1,2-ETHANEDIOL, Putative lipoprotein
Authors:Gomis-Ruth, F.X.
Deposit date:2022-09-14
Release date:2022-12-21
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A unique network of attack, defence and competence on the outer membrane of the periodontitis pathogen Tannerella forsythia.
Chem Sci, 14, 2023
6WT2
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BU of 6wt2 by Molmil
Crystal Structure of Putative NAD(P)H-Flavin Oxidoreductase from Neisseria meningitidis
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, FLAVIN MONONUCLEOTIDE, ...
Authors:Kim, Y, Maltseva, N, Endres, M, Crofts, T, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-05-01
Release date:2020-05-13
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Functional and Structural Characterization of Diverse NfsB Chloramphenicol Reductase Enzymes from Human Pathogens.
Microbiol Spectr, 10, 2022

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PDB entries from 2025-11-12

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