Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8PC2
DownloadVisualize
BU of 8pc2 by Molmil
SelDeg51 in complex with FKBP51FK1 domain and pVHL:EloB:EloC
Descriptor: Elongin-B, Elongin-C, Peptidyl-prolyl cis-trans isomerase FKBP5, ...
Authors:Meyners, C, Walz, M, Geiger, T.M, Hausch, F.
Deposit date:2023-06-09
Release date:2023-11-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Discovery of a Potent Proteolysis Targeting Chimera Enables Targeting the Scaffolding Functions of FK506-Binding Protein 51 (FKBP51).
Angew.Chem.Int.Ed.Engl., 63, 2024
8UL3
DownloadVisualize
BU of 8ul3 by Molmil
Structure of rsKiiro using SSX after illumination with 1.78 mJ/mm^2 of 405 nm light
Descriptor: GLYCEROL, SULFATE ION, rsKiiro cis structure
Authors:Baxter, J.M, van Thor, J.J.
Deposit date:2023-10-16
Release date:2024-11-27
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Power Density Titration of Reversible Photoisomerization of a Fluorescent Protein Chromophore in the Presence of Thermally Driven Barrier Crossing Shown by Quantitative Millisecond Serial Synchrotron X-ray Crystallography.
J.Am.Chem.Soc., 146, 2024
8UVE
DownloadVisualize
BU of 8uve by Molmil
Structure of NaDC3-Succinate complex in Coo-Ci conformation
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, CHOLESTEROL, Na(+)/dicarboxylate cotransporter 3, ...
Authors:Li, Y, Wang, D.N, Mindell, J.A, Rice, W.J, Song, J, Mikusevic, V, Marden, J.J, Becerril, A, Kuang, H, Wang, B.
Deposit date:2023-11-02
Release date:2024-12-25
Last modified:2025-04-02
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Substrate translocation and inhibition in human dicarboxylate transporter NaDC3.
Nat.Struct.Mol.Biol., 32, 2025
8UVF
DownloadVisualize
BU of 8uvf by Molmil
Structure of NaDC3-DMS complex in Ci-Ci conformation
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, CHOLESTEROL, Na(+)/dicarboxylate cotransporter 3, ...
Authors:Li, Y, Wang, D.N, Mindell, J.A, Rice, W.J, Song, J, Mikusevic, V, Marden, J.J, Becerril, A, Kuang, H, Wang, B.
Deposit date:2023-11-02
Release date:2024-12-25
Last modified:2025-04-02
Method:ELECTRON MICROSCOPY (2.17 Å)
Cite:Substrate translocation and inhibition in human dicarboxylate transporter NaDC3.
Nat.Struct.Mol.Biol., 32, 2025
8UVC
DownloadVisualize
BU of 8uvc by Molmil
Structure of NaDC3-aKG complex
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-OXOGLUTARIC ACID, CHOLESTEROL, ...
Authors:Li, Y, Wang, D.N, Mindell, J.A, Rice, W.J, Song, J, Mikusevic, V, Marden, J.J, Becerril, A, Kuang, H, Wang, B.
Deposit date:2023-11-02
Release date:2024-12-25
Last modified:2025-04-02
Method:ELECTRON MICROSCOPY (2.09 Å)
Cite:Substrate translocation and inhibition in human dicarboxylate transporter NaDC3.
Nat.Struct.Mol.Biol., 32, 2025
8UAG
DownloadVisualize
BU of 8uag by Molmil
Sucrose-phosphate synthase-like protein from Leishmania major
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, Sucrose-phosphate synthase-like protein, ...
Authors:Gorman, M.A, Parker, M.W, McConville, M.J.
Deposit date:2023-09-21
Release date:2024-12-18
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Sucrose-phosphate synthase-like protein from Leishmania major
To Be Published
8UFX
DownloadVisualize
BU of 8ufx by Molmil
CAII with SLC compound
Descriptor: 4-{[4-(trifluoromethyl)phenyl]carbamamido}benzene-1-sulfonamide, Carbonic anhydrase 2, GLYCEROL, ...
Authors:Peat, T.S.
Deposit date:2023-10-04
Release date:2024-12-18
Method:X-RAY DIFFRACTION (1.212 Å)
Cite:CAII with SLC compound
To Be Published
9MHE
DownloadVisualize
BU of 9mhe by Molmil
Native tagless Lassa virus spike complex bound to ARN-75039 at pH 8.0
Descriptor: (4S)-3-(4-tert-butoxyphenyl)-7-methyl-6-{4-[(propan-2-yl)oxy]phenyl}imidazo[1,2-a]pyridine, 12.1F Heavy chain, 12.1F Light chain, ...
Authors:Cohen-Dvashi, H, Katz, M, Diskin, R.
Deposit date:2024-12-11
Release date:2025-08-27
Last modified:2025-09-24
Method:ELECTRON MICROSCOPY (2.01 Å)
Cite:pH-induced conformational changes and inhibition of the Lassa virus spike complex.
Cell Host Microbe, 33, 2025
8PB1
DownloadVisualize
BU of 8pb1 by Molmil
Cryo-EM structure of a pre-dimerized murine IL-12 complete extracellular signaling complex (Class 1), obtained after local refinement.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Interleukin-12 receptor subunit beta-1,Death-associated protein kinase 1, Interleukin-12 receptor subunit beta-2,Calmodulin-1, ...
Authors:Felix, J, Bloch, Y, Savvides, S.N.
Deposit date:2023-06-08
Release date:2024-02-07
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structures of complete extracellular receptor assemblies mediated by IL-12 and IL-23.
Nat.Struct.Mol.Biol., 31, 2024
8VIS
DownloadVisualize
BU of 8vis by Molmil
Human TMPRSS11D complexed with a disulfide-linked autoinhibitory DDDDK peptide
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, MAGNESIUM ION, ...
Authors:Fraser, B.J, Dong, A, Ilyassov, O, Kenney, T, Li, Y.Y, Seitova, A, Li, Y, Hejazi, Z, Edwards, A, Benard, F, Arrowsmith, C.
Deposit date:2024-01-05
Release date:2024-01-31
Last modified:2025-05-28
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Structural basis of TMPRSS11D specificity and autocleavage activation.
Nat Commun, 16, 2025
8VSY
DownloadVisualize
BU of 8vsy by Molmil
Bile salt hydrolase from Arthrobacter citreus with covalent inhibitor AAA-10 bound
Descriptor: (1R,3aS,3bR,5aR,7R,9aS,9bS,11aR)-1-[(2R)-6-fluoro-5-oxohexan-2-yl]-9a,11a-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-7-yl hydrogen sulfate (non-preferred name), Bile salt hydrolase, CHLORIDE ION, ...
Authors:Dhindwal, P, Ruzzini, A.
Deposit date:2024-01-24
Release date:2024-02-07
Last modified:2025-04-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and functional analysis of a bile salt hydrolase from the bison microbiome.
J.Biol.Chem., 300, 2024
8VR7
DownloadVisualize
BU of 8vr7 by Molmil
crystal structure of the Pcryo_0619 N-acetyltransferase from Psychrobacter cryohalolentis K5 int he presence of acetyl coenzyme A
Descriptor: 1,2-ETHANEDIOL, 3'-PHOSPHATE-ADENOSINE-5'-DIPHOSPHATE, 3-[4-(2-HYDROXYETHYL)PIPERAZIN-1-YL]PROPANE-1-SULFONIC ACID, ...
Authors:Dunsirn, M.M, Bockhaus, N.J, Thoden, J.B, Holden, H.M.
Deposit date:2024-01-20
Release date:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Biochemical Investigation of the Enzymes Required for the Production of 2,3,4-triacetoamido-2,3,4-trideoxy-l-arabinose in Psychrobacter cryohalolentis K5
To Be Published
8VEX
DownloadVisualize
BU of 8vex by Molmil
Crystal structure of PRMT5:MEP50 in complex with MTA and oxamide compound 28
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, CHLORIDE ION, GLYCEROL, ...
Authors:Whittington, D.A.
Deposit date:2023-12-20
Release date:2024-04-24
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Discovery of TNG908: A Selective, Brain Penetrant, MTA-Cooperative PRMT5 Inhibitor That Is Synthetically Lethal with MTAP -Deleted Cancers.
J.Med.Chem., 67, 2024
8VEW
DownloadVisualize
BU of 8vew by Molmil
Crystal structure of PRMT5:MEP50 in complex with MTA and oxamide compound 24
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, 5-{2-[(2R,5S)-5-methyl-2-phenylpiperidin-1-yl](oxo)acetamido}pyridine-3-carboxamide, CHLORIDE ION, ...
Authors:Whittington, D.A.
Deposit date:2023-12-20
Release date:2024-04-24
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Discovery of TNG908: A Selective, Brain Penetrant, MTA-Cooperative PRMT5 Inhibitor That Is Synthetically Lethal with MTAP -Deleted Cancers.
J.Med.Chem., 67, 2024
6OJP
DownloadVisualize
BU of 6ojp by Molmil
Structure of glycolipid alpha-GSA[8,6P] in complex with mouse CD1d
Descriptor: (5R,6S,7S)-5,6-dihydroxy-7-(octanoylamino)-N-(6-phenylhexyl)-8-{[(2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl]oxy}octanamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d1, ...
Authors:Zajonc, D.M, Bitra, A.
Deposit date:2019-04-11
Release date:2019-08-21
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:A molecular switch in mouse CD1d modulates natural killer T cell activation by alpha-galactosylsphingamides.
J.Biol.Chem., 294, 2019
8VLS
DownloadVisualize
BU of 8vls by Molmil
Structure of VCP in complex with an ATPase activator (D2 domains only, dodecameric form)
Descriptor: (3R)-N-[2-(ethylsulfanyl)phenyl]-3-(1-oxo-1,3-dihydro-2H-isoindol-2-yl)butanamide, Transitional endoplasmic reticulum ATPase
Authors:Jones, N.H, Urnivicius, L, Kapoor, T.M.
Deposit date:2024-01-12
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Allosteric activation of VCP, an AAA unfoldase, by small molecule mimicry.
Proc.Natl.Acad.Sci.USA, 121, 2024
8VOV
DownloadVisualize
BU of 8vov by Molmil
Structure of VCP in complex with an ATPase activator and ADP (D2 domains only, hexameric form)
Descriptor: (3R)-N-[2-(ethylsulfanyl)phenyl]-3-(1-oxo-1,3-dihydro-2H-isoindol-2-yl)butanamide, ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase
Authors:Jones, N.H, Urnivicius, L, Kapoor, T.M.
Deposit date:2024-01-16
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Allosteric activation of VCP, an AAA unfoldase, by small molecule mimicry.
Proc.Natl.Acad.Sci.USA, 121, 2024
8VII
DownloadVisualize
BU of 8vii by Molmil
EgtB-IV from Crocosphaera subtropica, an ergothioneine-biosynthetic type IV sulfoxide synthase in complex with cysteine and hercynine
Descriptor: 1,2-ETHANEDIOL, CYSTEINE, MANGANESE (II) ION, ...
Authors:Ireland, K.A, Davis, K.M.
Deposit date:2024-01-04
Release date:2024-08-07
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.621 Å)
Cite:Structural insights into the convergent evolution of sulfoxide synthase EgtB-IV, an ergothioneine-biosynthetic homolog of ovothiol synthase OvoA.
Structure, 32, 2024
6NHQ
DownloadVisualize
BU of 6nhq by Molmil
Crystal structure of the A/Hong Kong/1/1968 (H3N2) influenza virus hemagglutinin HA2 I45M mutant
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1 chain, ...
Authors:Wu, N.C, Wilson, I.A.
Deposit date:2018-12-23
Release date:2020-04-15
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Different genetic barriers for resistance to HA stem antibodies in influenza H3 and H1 viruses.
Science, 368, 2020
8VDR
DownloadVisualize
BU of 8vdr by Molmil
Cryogenic electron microscopy model of full-length talin without R12 and FABD
Descriptor: Green fluorescent protein,Talin-1
Authors:Izard, T, Rangarajan, E.S.
Deposit date:2023-12-17
Release date:2024-10-02
Last modified:2025-08-06
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:High-resolution snapshots of the talin auto-inhibitory states suggest roles in cell adhesion and signaling.
Nat Commun, 15, 2024
8VDP
DownloadVisualize
BU of 8vdp by Molmil
Cryogenic electron microscopy model of full-length talin without FABD
Descriptor: Green fluorescent protein,Talin-1
Authors:Izard, T, Rangarajan, E.S.
Deposit date:2023-12-17
Release date:2024-10-02
Last modified:2025-08-06
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:High-resolution snapshots of the talin auto-inhibitory states suggest roles in cell adhesion and signaling.
Nat Commun, 15, 2024
8VH1
DownloadVisualize
BU of 8vh1 by Molmil
CH235.12 Fab bound to the HIV-1 CH505.M5 SOSIP
Descriptor: CH235.I60 Fab Heavy Chain, CH235.I60 Fab Light Chain, CH505.M5 SOSIP gp120, ...
Authors:Henderson, R, Acharya, P.
Deposit date:2023-12-30
Release date:2024-10-02
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (4.08 Å)
Cite:Engineering immunogens that select for specific mutations in HIV broadly neutralizing antibodies.
Nat Commun, 15, 2024
8VDO
DownloadVisualize
BU of 8vdo by Molmil
Cryogenic electron microscopy model of full-length talin lacking F2, R12 and FABD.
Descriptor: Green fluorescent protein,Talin-1
Authors:Izard, T, Rangarajan, E.S.
Deposit date:2023-12-16
Release date:2024-10-02
Last modified:2025-08-06
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:High-resolution snapshots of the talin auto-inhibitory states suggest roles in cell adhesion and signaling.
Nat Commun, 15, 2024
8VH2
DownloadVisualize
BU of 8vh2 by Molmil
CH235.12 Fab bound to the HIV-1 CH505.M5 SOSIP
Descriptor: CH235.12 Fab Heavy Chain, CH235.12 Fab Light Chain, CH505.M5.G458Y SOSIP gp120, ...
Authors:Henderson, R, Acharya, P.
Deposit date:2023-12-30
Release date:2024-10-02
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (4.31 Å)
Cite:Engineering immunogens that select for specific mutations in HIV broadly neutralizing antibodies.
Nat Commun, 15, 2024
8VDQ
DownloadVisualize
BU of 8vdq by Molmil
Cryogenic electron microscopy model of full-length talin
Descriptor: Green fluorescent protein,Talin-1
Authors:Izard, T, Rangarajan, E.S.
Deposit date:2023-12-17
Release date:2024-10-02
Last modified:2025-08-06
Method:ELECTRON MICROSCOPY (5.5 Å)
Cite:High-resolution snapshots of the talin auto-inhibitory states suggest roles in cell adhesion and signaling.
Nat Commun, 15, 2024

245011

PDB entries from 2025-11-19

PDB statisticsPDBj update infoContact PDBjnumon