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1MH9
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BU of 1mh9 by Molmil
Crystal Structure Analysis of deoxyribonucleotidase
Descriptor: MAGNESIUM ION, PHOSPHATE ION, deoxyribonucleotidase
Authors:Rinaldo-Matthis, A, Rampazzo, C, Reichard, P, Bianchi, V, Nordlund, P.
Deposit date:2002-08-19
Release date:2002-10-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of a human mitochondrial deoxyribonucleotidase.
Nat.Struct.Biol., 9, 2002
6FJJ
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BU of 6fjj by Molmil
Joint neutron and x-ray crystal structure of human carbonic anhydrase IX mimic (saccharin).
Descriptor: 1,2-BENZISOTHIAZOL-3(2H)-ONE 1,1-DIOXIDE, Carbonic anhydrase 2, ZINC ION
Authors:Fisher, S.Z.
Deposit date:2018-01-22
Release date:2019-02-06
Last modified:2024-05-01
Method:NEUTRON DIFFRACTION (1.5 Å), X-RAY DIFFRACTION
Cite:Using neutron crystallography to elucidate the basis of selective inhibition of carbonic anhydrase by saccharin and a derivative.
J. Struct. Biol., 205, 2019
8OZ3
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BU of 8oz3 by Molmil
Crystal structure of scFv ATOR 1017 bound to human 4-1BB
Descriptor: Single chain Fv, Tumor necrosis factor receptor superfamily member 9
Authors:Hakansson, M, Von Schantz, L, Rose, N.
Deposit date:2023-05-08
Release date:2024-03-13
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:ATOR-1017 (evunzekibart), an Fc-gamma receptor conditional 4-1BB agonist designed for optimal safety and efficacy, activates exhausted T cells in combination with anti-PD-1.
Cancer Immunol.Immunother., 72, 2023
5E94
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BU of 5e94 by Molmil
Antibody-bound Glucagon-like Peptide-1 receptor extracellular domain
Descriptor: Antibody Fab fragment heavy chain, Antibody Fab fragment light chain, Glucagon-like peptide 1 receptor
Authors:Soroka, V, Schluckebier, G, Reedtz-Runge, S.
Deposit date:2015-10-14
Release date:2016-08-24
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural insight into antibody-mediated antagonism of the Glucagon-like peptide-1 Receptor.
Sci Rep, 6, 2016
5ECD
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BU of 5ecd by Molmil
Structure of the Shigella flexneri VapC mutant D98N crystal form 1
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, tRNA(fMet)-specific endonuclease VapC
Authors:Xu, K.
Deposit date:2015-10-20
Release date:2016-02-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural analysis of the active site architecture of the VapC toxin from Shigella flexneri.
Proteins, 84, 2016
8P43
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BU of 8p43 by Molmil
Structure of the MHC class Ib molecule Qa-1b in complex with Q001 peptide
Descriptor: Beta-2-microglobulin, H-2 class I histocompatibility antigen, Qa-1b, ...
Authors:Sala, B.M, Achour, A.
Deposit date:2023-05-19
Release date:2024-06-12
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:MHC-E is a convergent checkpoint ligand for LILRB1 on macrophages and during inflammation for NKG2A on lymphocytes
To Be Published
2RG6
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BU of 2rg6 by Molmil
Phenylalanine pyrrolotriazine p38 alpha map kinase inhibitor compound 11J
Descriptor: 4-{[5-(methoxycarbamoyl)-2-methylphenyl]amino}-5-methyl-N-[(1S)-1-phenylethyl]pyrrolo[2,1-f][1,2,4]triazine-6-carboxamide, Mitogen-activated protein kinase 14
Authors:Sack, J.S.
Deposit date:2007-10-02
Release date:2008-01-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Design, Synthesis, and Anti-inflammatory Properties of Orally Active 4-(Phenylamino)-pyrrolo[2,1-f][1,2,4]triazine p38alpha Mitogen-Activated Protein Kinase Inhibitors
J.Med.Chem., 51, 2008
5DWC
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BU of 5dwc by Molmil
Crystal structure of restriction endonuclease AgeI
Descriptor: Type-2 restriction enzyme AgeI
Authors:Tamulaitiene, G, Ramonaite, I, Grazulis, S, Siksnys, V.
Deposit date:2015-09-22
Release date:2016-09-28
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Restriction endonuclease AgeI is a monomer which dimerizes to cleave DNA.
Nucleic Acids Res., 45, 2017
5EJE
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BU of 5eje by Molmil
Crystal structure of E. coli Adenylate kinase G56C/T163C double mutant in complex with Ap5a
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, COBALT (II) ION
Authors:Sauer, U.H, Kovermann, M, Grundstrom, C, Wolf-Watz, M, Sauer-Eriksson, A.E.
Deposit date:2015-11-01
Release date:2016-11-09
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for ligand binding to an enzyme by a conformational selection pathway.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6FSD
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BU of 6fsd by Molmil
Mus musculus acetylcholinesterase in complex with 2-(4-Biphenylyloxy)-N-[3-(1-piperidinyl)propyl]-acetamide hydrochloride (10)
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, 2-(4-phenylphenoxy)-~{N}-(3-piperidin-1-ylpropyl)ethanamide, ...
Authors:Knutsson, S, Engdahl, C, Kumari, R, Kindahl, T, Forsgren, N, Lindgren, C, Kitur, S, Kamau, L, Ekstrom, F, Linusson, A.
Deposit date:2018-02-19
Release date:2018-10-31
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Noncovalent Inhibitors of Mosquito Acetylcholinesterase 1 with Resistance-Breaking Potency.
J.Med.Chem., 61, 2018
8Q1R
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BU of 8q1r by Molmil
mouse Keap1 in complex with stapled peptide
Descriptor: Kelch-like ECH-associated protein 1, SODIUM ION, SULFATE ION, ...
Authors:Kack, H, Wissler, L.
Deposit date:2023-08-01
Release date:2023-10-25
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:A cell-active cyclic peptide targeting the Nrf2/Keap1 protein-protein interaction.
Chem Sci, 14, 2023
8Q1Q
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BU of 8q1q by Molmil
mouse Keap1 in complex with stapled peptide
Descriptor: Kelch-like ECH-associated protein 1, SULFATE ION, Stapled peptide, ...
Authors:Kack, H, Wissler, L.
Deposit date:2023-08-01
Release date:2023-10-25
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.378 Å)
Cite:A cell-active cyclic peptide targeting the Nrf2/Keap1 protein-protein interaction.
Chem Sci, 14, 2023
4XA8
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BU of 4xa8 by Molmil
Crystal structure of D-isomer specific 2-hydroxyacid dehydrogenase from Xanthobacter autotrophicus Py2
Descriptor: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
Authors:Handing, K.B, Gasiorowska, O.A, Shabalin, I.G, Cymborowski, M.T, Bonanno, J, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2014-12-12
Release date:2015-01-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of D-isomer specific 2-hydroxyacid dehydrogenase from Xanthobacter autotrophicus Py2.
to be published
8Q6S
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BU of 8q6s by Molmil
A carbohydrate esterase family 15 (CE15) glucuronoyl esterase from Phocaeicola vulgatus ATCC 8482
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, Putative acetyl xylan esterase, ...
Authors:Mazurkewich, S, Seveso, A, Banerjee, S, Lo Leggio, L, Larsbrink, J.
Deposit date:2023-08-14
Release date:2023-12-13
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Polysaccharide utilization loci from Bacteroidota encode CE15 enzymes with possible roles in cleaving pectin-lignin bonds.
Appl.Environ.Microbiol., 90, 2024
8POF
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BU of 8pof by Molmil
The crystal structure of RsSymEG1 reveals a unique form of smaller GH7 endoglucanases alongside GH7 cellobiohydrolases in protist symbionts of termites
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Putative glycosyl hydrolase family7, SODIUM ION
Authors:Haataja, T, Sandgren, M, Hansson, H, Stahlberg, J.
Deposit date:2023-07-04
Release date:2023-12-27
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The crystal structure of RsSymEG1 reveals a unique form of smaller GH7 endoglucanases alongside GH7 cellobiohydrolases in protist symbionts of termites.
Febs J., 291, 2024
3HV6
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BU of 3hv6 by Molmil
Human p38 MAP Kinase in Complex with RL39
Descriptor: 1-[3-tert-butyl-1-(4-methylphenyl)-1H-pyrazol-5-yl]-3-[4-(2-morpholin-4-ylethoxy)phenyl]urea, Mitogen-activated protein kinase 14, octyl beta-D-glucopyranoside
Authors:Gruetter, C, Simard, J.R, Getlik, M, Rauh, D.
Deposit date:2009-06-15
Release date:2009-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Displacement assay for the detection of stabilizers of inactive kinase conformations.
J.Med.Chem., 53, 2010
8Q90
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BU of 8q90 by Molmil
Halophilic Lrp transcription factor
Descriptor: AsnC family transcriptional regulator
Authors:Garcia-Bonete, M.J, Bonete, M.-J.
Deposit date:2023-08-19
Release date:2024-01-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Global Lrp regulator protein from Haloferax mediterranei: Transcriptional analysis and structural characterization.
Int.J.Biol.Macromol., 260, 2024
8PXV
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BU of 8pxv by Molmil
Targeting extended blood antigens by Akkermansia muciniphila enzymes unveils a missing link for generating universal donor blood
Descriptor: Beta-N-acetylhexosaminidase, GLYCEROL, SODIUM ION, ...
Authors:Weikum, J, Jensen, M, Abou Hachem, M, Morth, J.P.
Deposit date:2023-07-24
Release date:2024-02-28
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Akkermansia muciniphila exoglycosidases target extended blood group antigens to generate ABO-universal blood.
Nat Microbiol, 9, 2024
8PVS
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BU of 8pvs by Molmil
Targeting extended blood antigens by Akkermansia muciniphila enzymes unveils a missing link for generating universal donor blood
Descriptor: 1,2-ETHANEDIOL, Alpha-1,3-galactosidase B, CALCIUM ION, ...
Authors:Jensen, M, Abou Hachem, M, Morth, J.P.
Deposit date:2023-07-18
Release date:2024-02-28
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Akkermansia muciniphila exoglycosidases target extended blood group antigens to generate ABO-universal blood.
Nat Microbiol, 9, 2024
8PXU
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BU of 8pxu by Molmil
Targeting extended blood antigens by Akkermansia muciniphila enzymes unveils a missing link for generating universal donor blood
Descriptor: Beta-N-acetylhexosaminidase, CACODYLATE ION
Authors:Jensen, M, Abou Hachem, M, Morth, J.P.
Deposit date:2023-07-24
Release date:2024-02-28
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Akkermansia muciniphila exoglycosidases target extended blood group antigens to generate ABO-universal blood.
Nat Microbiol, 9, 2024
6GHO
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BU of 6gho by Molmil
Crystal structure of Spx in complex with YjbH
Descriptor: CHLORIDE ION, Regulatory protein Spx, UPF0413 protein GK0824
Authors:Awad, W, Logan, D.T, von Wachenfeldt, C.
Deposit date:2018-05-08
Release date:2019-04-24
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Structural Basis for YjbH Adaptor-Mediated Recognition of Transcription Factor Spx.
Structure, 27, 2019
6GHB
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BU of 6ghb by Molmil
Crystal structure of Spx in complex with YjbH (oxidized)
Descriptor: MAGNESIUM ION, Regulatory protein Spx, UPF0413 protein GK0824
Authors:Awad, W, Logan, D.T, von Wachenfeldt, C.
Deposit date:2018-05-06
Release date:2019-04-24
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (3.104 Å)
Cite:Structural Basis for YjbH Adaptor-Mediated Recognition of Transcription Factor Spx.
Structure, 27, 2019
4YGO
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BU of 4ygo by Molmil
Dodecameric structure of spermidine N-acetyltransferase from Vibrio cholerae in intermediate state
Descriptor: CALCIUM ION, METHANOL, Spermidine n1-acetyltransferase
Authors:Filippova, E.V, Minasov, G, Kiryukhina, O, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2015-02-26
Release date:2015-10-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Substrate-Induced Allosteric Change in the Quaternary Structure of the Spermidine N-Acetyltransferase SpeG.
J.Mol.Biol., 427, 2015
6GRN
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BU of 6grn by Molmil
CELLOBIOHYDROLASE I (CEL7A) FROM Trichoderma reesei with S-dihydroxypropranolol in the active site
Descriptor: 2-[[(2~{S})-3-naphthalen-1-yloxy-2-oxidanyl-propyl]amino]propane-1,3-diol, 2-acetamido-2-deoxy-beta-D-glucopyranose, COBALT (II) ION, ...
Authors:Sandgren, M, Fagerstrom, A, Widmalm, G, Stahlberg, J.
Deposit date:2018-06-11
Release date:2018-10-10
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Enantioselective Binding of Propranolol and Analogues Thereof to Cellobiohydrolase Cel7A.
Chemistry, 24, 2018
6GL4
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BU of 6gl4 by Molmil
Structure of GluA2o ligand-binding domain (S1S2J) in complex with glutamate and sodium bromide at 1.95 A resolution
Descriptor: ACETATE ION, BROMIDE ION, GLUTAMIC ACID, ...
Authors:Venskutonyte, R, Frydenvang, K, Kastrup, J.S.
Deposit date:2018-05-22
Release date:2019-05-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.948 Å)
Cite:Nanoscale Mobility of the Apo State and TARP Stoichiometry Dictate the Gating Behavior of Alternatively Spliced AMPA Receptors.
Neuron, 102, 2019

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