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7TWQ
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BU of 7twq by Molmil
Crystal structure of SARS-CoV-2 NSP3 macrodomain at pH 9 (P43 crystal form)
Descriptor: Non-structural protein 3
Authors:Correy, G.J, Fraser, J.S.
Deposit date:2022-02-07
Release date:2022-02-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:The mechanisms of catalysis and ligand binding for the SARS-CoV-2 NSP3 macrodomain from neutron and x-ray diffraction at room temperature.
Sci Adv, 8, 2022
7TWP
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BU of 7twp by Molmil
Crystal structure of SARS-CoV-2 NSP3 macrodomain at pH 7 (P43 crystal form)
Descriptor: ACETATE ION, Non-structural protein 3
Authors:Correy, G.J, Fraser, J.S.
Deposit date:2022-02-07
Release date:2022-02-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:The mechanisms of catalysis and ligand binding for the SARS-CoV-2 NSP3 macrodomain from neutron and x-ray diffraction at room temperature.
Sci Adv, 8, 2022
7TWS
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BU of 7tws by Molmil
Crystal structure of SARS-CoV-2 NSP3 macrodomain at pH 10 (P43 crystal form)
Descriptor: Non-structural protein 3
Authors:Correy, G.J, Fraser, J.S.
Deposit date:2022-02-07
Release date:2022-02-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:The mechanisms of catalysis and ligand binding for the SARS-CoV-2 NSP3 macrodomain from neutron and x-ray diffraction at room temperature.
Sci Adv, 8, 2022
7TWJ
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BU of 7twj by Molmil
Crystal structure of SARS-CoV-2 NSP3 macrodomain at pH 4 (P43 crystal form)
Descriptor: CITRIC ACID, Non-structural protein 3
Authors:Correy, G.J, Fraser, J.S.
Deposit date:2022-02-07
Release date:2022-02-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:The mechanisms of catalysis and ligand binding for the SARS-CoV-2 NSP3 macrodomain from neutron and x-ray diffraction at room temperature.
Sci Adv, 8, 2022
7TWV
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BU of 7twv by Molmil
Crystal structure of SARS-CoV-2 NSP3 macrodomain in complex with ADP-ribose at pH 5 (P43 crystal form)
Descriptor: CITRIC ACID, Non-structural protein 3, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
Authors:Correy, G.J, Fraser, J.S.
Deposit date:2022-02-07
Release date:2022-02-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Crystal structure of SARS-CoV-2 NSP3 macrodomain in complex with ADP-ribose at pH 5 (P43 crystal form)
To Be Published
4NPD
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BU of 4npd by Molmil
High-resolution structure of C domain of staphylococcal protein A at cryogenic temperature
Descriptor: Immunoglobulin G-binding protein A, THIOCYANATE ION, ZINC ION
Authors:Deis, L.N, Pemble IV, C.W, Oas, T.G, Richardson, J.S, Richardson, D.C.
Deposit date:2013-11-21
Release date:2014-10-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Multiscale conformational heterogeneity in staphylococcal protein a: possible determinant of functional plasticity.
Structure, 22, 2014
3SBN
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BU of 3sbn by Molmil
trichovirin I-4A in polar environment at 0.9 Angstroem
Descriptor: ACETONITRILE, METHANOL, Trichovirin I-4A
Authors:Gessmann, R, Axford, D, Petratos, K.
Deposit date:2011-06-06
Release date:2011-12-28
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Four complete turns of a curved 310-helix at atomic resolution: The crystal structure of the peptaibol trichovirin I-4A in polar environment suggests a transition to alpha-helix for membrane function
Acta Crystallogr.,Sect.D, 68, 2012
2BW4
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BU of 2bw4 by Molmil
Atomic Resolution Structure of Resting State of the Achromobacter cycloclastes Cu Nitrite Reductase
Descriptor: ACETATE ION, COPPER (II) ION, COPPER-CONTAINING NITRITE REDUCTASE, ...
Authors:Antonyuk, S.V, Strange, R.W, Sawers, G, Eady, R.R, Hasnain, S.S.
Deposit date:2005-07-12
Release date:2005-08-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Atomic Resolution Structures of Resting-State, Substrate- and Product-Complexed Cu-Nitrite Reductase Provide Insight Into Catalytic Mechanism
Proc.Natl.Acad.Sci.USA, 102, 2005
7QP2
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BU of 7qp2 by Molmil
1-deazaguanosine modified-RNA Sarcin Ricin Loop
Descriptor: GLYCEROL, RNA (27-MER)
Authors:Ennifar, E, Micura, R, Bereiter, R, Renard, E, Kreutz, C.
Deposit date:2021-12-30
Release date:2022-07-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:1-Deazaguanosine-Modified RNA: The Missing Piece for Functional RNA Atomic Mutagenesis.
J.Am.Chem.Soc., 144, 2022
2WUR
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BU of 2wur by Molmil
Atomic resolution structure of GFP measured on a rotating anode
Descriptor: ETHANOL, GREEN FLUORESCENT PROTEIN, ISOPROPYL ALCOHOL
Authors:Palm, G.J, Schierbeek, A.J, Kloos, M.
Deposit date:2009-10-07
Release date:2010-05-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Visualizing Proton Antenna in a High-Resolution Green Fluorescent Protein Structure.
J.Am.Chem.Soc., 132, 2010
8ANM
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BU of 8anm by Molmil
Structure of the amyloid-forming peptide LYIQWL from Tc5b, grown from water
Descriptor: Peptide LYIQWL from Tc5b
Authors:Durvanger, Z.
Deposit date:2022-08-05
Release date:2023-08-02
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Polymorphic amyloid nanostructures of hormone peptides involved in glucose homeostasis display reversible amyloid formation.
Nat Commun, 14, 2023
3K34
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BU of 3k34 by Molmil
Human carbonic anhydrase II with a sulfonamide inhibitor
Descriptor: (4-SULFAMOYL-PHENYL)-THIOCARBAMIC ACID O-(2-THIOPHEN-3-YL-ETHYL) ESTER, 4-(HYDROXYMERCURY)BENZOIC ACID, Carbonic anhydrase 2, ...
Authors:Behnke, C.A, Le Trong, I, Merritt, E.A, Teller, D.C, Stenkamp, R.E.
Deposit date:2009-10-01
Release date:2010-05-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Atomic resolution studies of carbonic anhydrase II.
Acta Crystallogr.,Sect.D, 66, 2010
3ZSK
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BU of 3zsk by Molmil
Crystal structure of Human Galectin-3 CRD with glycerol bound at 0.90 angstrom resolution
Descriptor: GALECTIN-3, GLYCEROL
Authors:Saraboji, K, Hakansson, M, Diehl, C, Nilsson, U.J, Leffler, H, Akke, M, Logan, D.T.
Deposit date:2011-06-28
Release date:2011-12-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:The Carbohydrate-Binding Site in Galectin-3 is Pre-Organized to Recognize a Sugar-Like Framework of Oxygens: Ultra-High Resolution Structures and Water Dynamics.
Biochemistry, 51, 2012
7OUZ
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BU of 7ouz by Molmil
Human OMPD-domain of UMPS in complex with 6-hydroxy-UMP at 0.9 Angstroms resolution, crystal 1
Descriptor: 6-HYDROXYURIDINE-5'-PHOSPHATE, GLYCEROL, PROLINE, ...
Authors:Rindfleisch, S, Tittmann, K.
Deposit date:2021-06-14
Release date:2022-04-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Ground-state destabilization by electrostatic repulsion is not a driving force in orotidine-5-monophosphate decarboxylase catalysis
Nat Catal, 5, 2022
6FMC
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BU of 6fmc by Molmil
Neuropilin1-b1 domain in complex with EG01377, 0.9 Angstrom structure
Descriptor: (2~{S})-2-[[3-[[5-[4-(aminomethyl)phenyl]-1-benzofuran-7-yl]sulfonylamino]thiophen-2-yl]carbonylamino]-5-carbamimidamido-pentanoic acid, Neuropilin-1
Authors:Yelland, T, Djordjevic, S, Fotinou, K, Selwood, D, Zachary, I, Frankel, P.
Deposit date:2018-01-30
Release date:2018-10-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Small Molecule Neuropilin-1 Antagonists Combine Antiangiogenic and Antitumor Activity with Immune Modulation through Reduction of Transforming Growth Factor Beta (TGF beta ) Production in Regulatory T-Cells.
J. Med. Chem., 61, 2018
1OEW
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BU of 1oew by Molmil
ATOMIC RESOLUTION STRUCTURE OF NATIVE ENDOTHIAPEPSIN
Descriptor: ENDOTHIAPEPSIN, GLYCEROL, SERINE, ...
Authors:Coates, L, Erskine, P.T, Mall, S, Gill, R.S, Wood, S.P, Myles, D.A.A, Cooper, J.B.
Deposit date:2003-03-31
Release date:2003-04-02
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Atomic Resolution Analysis of the Catalytic Site of an Aspartic Proteinase and an Unexpected Mode of Binding by Short Peptides
Protein Sci., 12, 2003
1G66
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BU of 1g66 by Molmil
ACETYLXYLAN ESTERASE AT 0.90 ANGSTROM RESOLUTION
Descriptor: ACETYL XYLAN ESTERASE II, GLYCEROL, SULFATE ION
Authors:Ghosh, D, Sawicki, M, Lala, P, Erman, M, Pangborn, W, Eyzaguirre, J, Gutierrez, R, Jornvall, H, Thiel, D.J.
Deposit date:2000-11-03
Release date:2001-01-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Multiple conformations of catalytic serine and histidine in acetylxylan esterase at 0.90 A.
J.Biol.Chem., 276, 2001
7WOM
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BU of 7wom by Molmil
The 0.90 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with eicosapentaenoic acid
Descriptor: 5,8,11,14,17-EICOSAPENTAENOIC ACID, Fatty acid-binding protein, heart
Authors:Sugiyama, S, Kakinouchi, K, Nakano, R, Matsuoka, S, Tsuchikawa, H, Sonoyama, M, Inoue, Y, Hayashi, F, Murata, M.
Deposit date:2022-01-21
Release date:2023-01-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:The 0.90 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with eicosapentaenoic acid
To Be Published
7LTD
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BU of 7ltd by Molmil
X-ray radiation damage series on Proteinase K at 100K, crystal structure, dataset 1
Descriptor: CALCIUM ION, NITRATE ION, Proteinase K
Authors:Yabukarski, F, Doukov, T, Herschlag, D.
Deposit date:2021-02-19
Release date:2022-08-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals.
Acta Crystallogr D Struct Biol, 78, 2022
7WPG
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BU of 7wpg by Molmil
The 0.90 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with heptanoic acid
Descriptor: Fatty acid-binding protein, heart, HEXAETHYLENE GLYCOL, ...
Authors:Sugiyama, S, Matsuoka, S, Tsuchikawa, H, Sonoyama, M, Inoue, Y, Hayashi, F, Murata, M.
Deposit date:2022-01-23
Release date:2023-01-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:The 0.90 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with heptanoic acid
To Be Published
6BZM
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BU of 6bzm by Molmil
GFGNFGTS from low-complexity/FG repeat domain of Nup98, residues 116-123
Descriptor: Nuclear pore complex protein Nup98-Nup96
Authors:Hughes, M.P, Rodriguez, J.A, Sawaya, M.R, Cascio, D, Chong, L, Gonen, T, Eisenberg, D.S.
Deposit date:2017-12-24
Release date:2018-04-04
Last modified:2024-03-13
Method:ELECTRON CRYSTALLOGRAPHY (0.9 Å)
Cite:Atomic structures of low-complexity protein segments reveal kinked beta sheets that assemble networks.
Science, 359, 2018
6ZYB
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BU of 6zyb by Molmil
Sarcin-Ricin Loop RNA from Ecoli with a C2667-2'-OCF3 modification
Descriptor: Sarcin-Ricin Loop RNA from Ecoli with a C2667-2'-OCF3 modification
Authors:Ennifar, E.
Deposit date:2020-07-31
Release date:2020-12-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:2'- O -Trifluoromethylated RNA - a powerful modification for RNA chemistry and NMR spectroscopy.
Chem Sci, 11, 2020
8DDG
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BU of 8ddg by Molmil
FYF peptide forms a standard beta-sheet
Descriptor: PHE-TYR-PHE
Authors:Sawaya, M.R, Hazari, A, Eisenberg, D.E, Vlahakis, N.W.
Deposit date:2022-06-18
Release date:2022-09-28
Last modified:2024-05-22
Method:ELECTRON CRYSTALLOGRAPHY (0.9 Å)
Cite:The rippled beta-sheet layer configuration-a novel supramolecular architecture based on predictions by Pauling and Corey.
Chem Sci, 13, 2022
3G21
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BU of 3g21 by Molmil
Crystal structure of the C-terminal domain of the Rous Sarcoma Virus capsid protein: Low pH
Descriptor: Gag polyprotein, NITRATE ION
Authors:Kingston, R.L.
Deposit date:2009-01-30
Release date:2009-06-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Proton-linked dimerization of a retroviral capsid protein initiates capsid assembly
Structure, 17, 2009
4NSV
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BU of 4nsv by Molmil
Lysobacter enzymogenes lysc endoproteinase K30R mutant covalently inhibited by TLCK
Descriptor: CHLORIDE ION, Lysyl endopeptidase, N-[(2S,3S)-7-amino-1-chloro-2-hydroxyheptan-3-yl]-4-methylbenzenesulfonamide (Bound Form), ...
Authors:Asztalos, P, Muller, A, Holke, W, Sobek, H, Rudolph, M.G.
Deposit date:2013-11-29
Release date:2014-04-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Atomic resolution structure of a lysine-specific endoproteinase from Lysobacter enzymogenes suggests a hydroxyl group bound to the oxyanion hole.
Acta Crystallogr.,Sect.D, 70, 2014

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PDB entries from 2024-07-17

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