Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7OME
DownloadVisualize
BU of 7ome by Molmil
Azacoelenterazine-bound Renilla-type engineered ancestral luciferase variant (AncFT7)
Descriptor: 6-(4-hydroxyphenyl)-2-[(4-hydroxyphenyl)methyl]-8-(phenylmethyl)-[1,2,4]triazolo[4,3-a]pyrazin-3-one, Renilla-type engineered ancestral luciferase variant (AncFT7)
Authors:Schenkmayerova, A, Janin, Y.L, Marek, M.
Deposit date:2021-05-21
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.501 Å)
Cite:Structural and chemical basis of the Renilla-type bioluminescence
To Be Published
8U7M
DownloadVisualize
BU of 8u7m by Molmil
Human retinal variant phosphomimetic IMPDH1(595)-S477D free octamer bound by GTP, ATP, IMP, and NAD+
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, INOSINIC ACID, ...
Authors:Calise, S.J, Kollman, J.M.
Deposit date:2023-09-15
Release date:2024-01-31
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Light-sensitive phosphorylation regulates retinal IMPDH1 activity and filament assembly.
J.Cell Biol., 223, 2024
4KC5
DownloadVisualize
BU of 4kc5 by Molmil
Crystal structure of the C-terminal part of RhiE from Burkholderia rhizoxinica
Descriptor: GLYCEROL, RhiE protein
Authors:Zocher, G, Heim, J.B, Stehle, T.
Deposit date:2013-04-24
Release date:2013-09-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Vinylogous chain branching catalysed by a dedicated polyketide synthase module.
Nature, 502, 2013
7OLL
DownloadVisualize
BU of 7oll by Molmil
Dioxygenase AsqJ mutant (V72I) in complex with 2b and Tris
Descriptor: (3~{Z})-4-methyl-3-(phenylmethylidene)-1~{H}-1,4-benzodiazepine-2,5-dione, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BROMIDE ION, ...
Authors:Auman, D, Mader, S.L, Ecker, F, Dorst, K, Braeuer, A, Widmalm, G, Groll, M, Kaila, V.R.I.
Deposit date:2021-05-20
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Peroxy Intermediate Drives Carbon Bond Activation in the Dioxygenase AsqJ.
J.Am.Chem.Soc., 144, 2022
6GBN
DownloadVisualize
BU of 6gbn by Molmil
Crystal structure of S-adenosyl-L-homocysteine hydrolase from Cytophaga hutchinsonii in complex with adenosine
Descriptor: ADENOSINE, Adenosylhomocysteinase, DI(HYDROXYETHYL)ETHER, ...
Authors:Czyrko, J, Jaskolski, M, Brzezinski, K.
Deposit date:2018-04-15
Release date:2018-08-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Crystal structure of S-adenosyl-L-homocysteine hydrolase from Cytophaga hutchinsonii, a case of combination of crystallographic and non-crystallographic symmetry.
Croatica Chemica Acta, 91, 2018
7OLK
DownloadVisualize
BU of 7olk by Molmil
Dioxygenase AsqJ in complex with 2b and Tris
Descriptor: (3~{Z})-4-methyl-3-(phenylmethylidene)-1~{H}-1,4-benzodiazepine-2,5-dione, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BROMIDE ION, ...
Authors:Auman, D, Mader, S.L, Ecker, F, Dorst, K, Braeuer, A, Widmalm, G, Groll, M, Kaila, V.R.I.
Deposit date:2021-05-20
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Peroxy Intermediate Drives Carbon Bond Activation in the Dioxygenase AsqJ.
J.Am.Chem.Soc., 144, 2022
8UBR
DownloadVisualize
BU of 8ubr by Molmil
Complex of the phosphorylated human cystic fibrosis transmembrane conductance regulator (CFTR) with CFTRinh-172 and ATP/Mg
Descriptor: 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, 4-[(Z)-{(3M)-4-oxo-2-sulfanylidene-3-[3-(trifluoromethyl)phenyl]-1,3-thiazolidin-5-ylidene}methyl]benzoic acid, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Young, P.G, Fiedorczuk, K, Chen, J.
Deposit date:2023-09-24
Release date:2024-02-21
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural basis for CFTR inhibition by CFTR inh -172.
Proc.Natl.Acad.Sci.USA, 121, 2024
7OLT
DownloadVisualize
BU of 7olt by Molmil
Dioxygenase AsqJ in complex with 2 and Tris
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-Methoxydehydrocyclopeptin, BROMIDE ION, ...
Authors:Auman, D, Mader, S.L, Ecker, F, Dorst, K, Braeuer, A, Widmalm, G, Groll, M, Kaila, V.R.I.
Deposit date:2021-05-20
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Peroxy Intermediate Drives Carbon Bond Activation in the Dioxygenase AsqJ.
J.Am.Chem.Soc., 144, 2022
7OLP
DownloadVisualize
BU of 7olp by Molmil
Dioxygenase AsqJ mutant (V72I) in complex with 2 and alpha-ketoglutarate
Descriptor: 2-OXOGLUTARIC ACID, 4-Methoxydehydrocyclopeptin, Iron/alpha-ketoglutarate-dependent dioxygenase asqJ, ...
Authors:Auman, D, Mader, S.L, Ecker, F, Dorst, K, Braeuer, A, Widmalm, G, Groll, M, Kaila, V.R.I.
Deposit date:2021-05-20
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Peroxy Intermediate Drives Carbon Bond Activation in the Dioxygenase AsqJ.
J.Am.Chem.Soc., 144, 2022
8V8C
DownloadVisualize
BU of 8v8c by Molmil
Alpha7-nicotinic acetylcholine receptor time resolved bound to epibatidine and PNU-120596 asymmetric state 1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Burke, S.M, Noviello, C.M, Hibbs, R.E.
Deposit date:2023-12-05
Release date:2024-02-21
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.29 Å)
Cite:Structural mechanisms of alpha 7 nicotinic receptor allosteric modulation and activation.
Cell, 187, 2024
7PB1
DownloadVisualize
BU of 7pb1 by Molmil
Structure of the human heterotetrameric cis-prenyltransferase complex in complex with magnesium, GGPP and IsPP
Descriptor: 3-methylbut-3-enylsulfanyl(phosphonooxy)phosphinic acid, Dehydrodolichyl diphosphate synthase complex subunit DHDDS, Dehydrodolichyl diphosphate synthase complex subunit NUS1, ...
Authors:Giladi, M, Lisnyansky Bar-El, M, Haitin, Y.
Deposit date:2021-07-30
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Structural basis for long-chain isoprenoid synthesis by cis -prenyltransferases.
Sci Adv, 8, 2022
8V88
DownloadVisualize
BU of 8v88 by Molmil
Alpha7-nicotinic acetylcholine receptor bound to epibatidine and GAT107
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, (3aR,4S,9bS)-4-(4-bromophenyl)-3a,4,5,9b-tetrahydro-3H-cyclopenta[c]quinoline-8-sulfonamide, (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, ...
Authors:Burke, S.M, Noviello, C.M, Hibbs, R.E.
Deposit date:2023-12-05
Release date:2024-02-21
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Structural mechanisms of alpha 7 nicotinic receptor allosteric modulation and activation.
Cell, 187, 2024
7OLQ
DownloadVisualize
BU of 7olq by Molmil
Dioxygenase AsqJ mutant (V72I) in complex with 2 and Tris
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-Methoxydehydrocyclopeptin, BROMIDE ION, ...
Authors:Auman, D, Mader, S.L, Ecker, F, Dorst, K, Braeuer, A, Widmalm, G, Groll, M, Kaila, V.R.I.
Deposit date:2021-05-20
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Peroxy Intermediate Drives Carbon Bond Activation in the Dioxygenase AsqJ.
J.Am.Chem.Soc., 144, 2022
8UTB
DownloadVisualize
BU of 8utb by Molmil
Alpha7-nicotinic acetylcholine receptor bound to epibatidine and NS-1738
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Burke, S.M, Noviello, C.M, Hibbs, R.E.
Deposit date:2023-10-30
Release date:2024-02-21
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Structural mechanisms of alpha 7 nicotinic receptor allosteric modulation and activation.
Cell, 187, 2024
8FCN
DownloadVisualize
BU of 8fcn by Molmil
Cryo-EM structure of p97:UBXD1 VIM-only state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase, UBX domain-containing protein 6
Authors:Braxton, J.R, Tucker, M.R, Tse, E, Southworth, D.R.
Deposit date:2022-12-01
Release date:2023-06-21
Last modified:2023-12-20
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:The p97/VCP adaptor UBXD1 drives AAA+ remodeling and ring opening through multi-domain tethered interactions.
Nat.Struct.Mol.Biol., 30, 2023
6GDY
DownloadVisualize
BU of 6gdy by Molmil
Crystal structure of 2OG oxygenase JMJD6 (aa 1-343) in complex with Fe(II) and 2OG
Descriptor: 2-OXOGLUTARIC ACID, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6, ...
Authors:Islam, M.S, Schofield, C.J, McDonough, M.A.
Deposit date:2018-04-24
Release date:2019-04-03
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Biochemical and structural investigations clarify the substrate selectivity of the 2-oxoglutarate oxygenase JMJD6.
J.Biol.Chem., 294, 2019
7PAX
DownloadVisualize
BU of 7pax by Molmil
Structure of the human heterotetrameric cis-prenyltransferase complex in complex with magnesium, FsPP and IPP
Descriptor: 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE, Dehydrodolichyl diphosphate synthase complex subunit DHDDS, Dehydrodolichyl diphosphate synthase complex subunit NUS1, ...
Authors:Giladi, M, Lisnyansky Bar-El, M, Haitin, Y.
Deposit date:2021-07-30
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for long-chain isoprenoid synthesis by cis -prenyltransferases.
Sci Adv, 8, 2022
8V80
DownloadVisualize
BU of 8v80 by Molmil
Alpha7-nicotinic acetylcholine receptor bound to epibatidine and (-)-TQS
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, (3aR,4S,9bS)-4-(naphthalen-1-yl)-3a,4,5,9b-tetrahydro-3H-cyclopenta[c]quinoline-8-sulfonamide, (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, ...
Authors:Burke, S.M, Noviello, C.M, Hibbs, R.E.
Deposit date:2023-12-04
Release date:2024-02-21
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (2.34 Å)
Cite:Structural mechanisms of alpha 7 nicotinic receptor allosteric modulation and activation.
Cell, 187, 2024
6GE8
DownloadVisualize
BU of 6ge8 by Molmil
Crystal structure of Mycobacterium tuberculosis BioA
Descriptor: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, MAGNESIUM ION, [(2~{S})-3-(1~{H}-indol-3-yl)-1-[(2~{E})-2-[[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylidene]hydrazinyl]-1-oxidanylidene-propan-2-yl]azanium
Authors:Ekstrom, A, Campopiano, D.J, Marles-Wright, J.
Deposit date:2018-04-25
Release date:2019-05-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.869 Å)
Cite:Crystal structure of Mycobacterium tuberculosis BioA
To Be Published
8UT1
DownloadVisualize
BU of 8ut1 by Molmil
Alpha7-nicotinic acetylcholine receptor bound to epibatidine
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Burke, S.M, Hibbs, R.E, Noviello, C.M.
Deposit date:2023-10-30
Release date:2024-02-21
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Structural mechanisms of alpha 7 nicotinic receptor allosteric modulation and activation.
Cell, 187, 2024
8V8A
DownloadVisualize
BU of 8v8a by Molmil
Alpha7-nicotinic acetylcholine receptor time resolved bound to epibatidine and PNU-120596 desensitized intermediate state
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Burke, S.M, Noviello, C.M, Hibbs, R.E.
Deposit date:2023-12-05
Release date:2024-02-21
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (2.19 Å)
Cite:Structural mechanisms of alpha 7 nicotinic receptor allosteric modulation and activation.
Cell, 187, 2024
7OMD
DownloadVisualize
BU of 7omd by Molmil
Crystal structure of azacoelenterazine-bound Renilla reniformis luciferase variant RLuc8-D162A
Descriptor: 6-(4-hydroxyphenyl)-2-[(4-hydroxyphenyl)methyl]-8-(phenylmethyl)-[1,2,4]triazolo[4,3-a]pyrazin-3-one, CHLORIDE ION, Coelenterazine h 2-monooxygenase, ...
Authors:Schenkmayerova, A, Janin, Y.L, Marek, M.
Deposit date:2021-05-21
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:Catalytic mechanism for Renilla-type luciferases
Nat Catal, 2023
8V82
DownloadVisualize
BU of 8v82 by Molmil
Alpha7-nicotinic acetylcholine receptor bound to epibatidine and PNU-120596
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Burke, S.M, Noviello, C.M, Hibbs, R.E.
Deposit date:2023-12-04
Release date:2024-02-21
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (2.61 Å)
Cite:Structural mechanisms of alpha 7 nicotinic receptor allosteric modulation and activation.
Cell, 187, 2024
7OOR
DownloadVisualize
BU of 7oor by Molmil
NaK C-DI mutant with Na+ and K+
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, ...
Authors:Minniberger, S, Plested, A.J.R.
Deposit date:2021-05-28
Release date:2022-06-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Asymmetry and Ion Selectivity Properties of Bacterial Channel NaK Mutants Derived from Ionotropic Glutamate Receptors.
J.Mol.Biol., 435, 2023
8V89
DownloadVisualize
BU of 8v89 by Molmil
Alpha7-nicotinic acetylcholine receptor time resolved resting state
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Burke, S.M, Noviello, C.M, Hibbs, R.E.
Deposit date:2023-12-05
Release date:2024-02-21
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (2.53 Å)
Cite:Structural mechanisms of alpha 7 nicotinic receptor allosteric modulation and activation.
Cell, 187, 2024

224004

PDB entries from 2024-08-21

PDB statisticsPDBj update infoContact PDBjnumon