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8CYU
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Crystal structure of SARS-CoV-2 Mpro with compound C5
Descriptor: 3C-like proteinase, N-[(4-chlorothiophen-2-yl)methyl]-N-[4-(dimethylamino)phenyl]-2-(isoquinolin-4-yl)acetamide
Authors:Worrall, L.J, Lee, J, Strynadka, N.C.J.
Deposit date:2022-05-24
Release date:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A novel class of broad-spectrum active-site-directed 3C-like protease inhibitors with nanomolar antiviral activity against highly immune-evasive SARS-CoV-2 Omicron subvariants.
Emerg Microbes Infect, 12, 2023
8CZ4
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Crystal structure of SARS-CoV-2 Mpro with compound C3
Descriptor: 3C-like proteinase, N-(4-tert-butylphenyl)-N-[(4-chlorothiophen-2-yl)methyl]-2-(isoquinolin-4-yl)acetamide
Authors:Worrall, L.J, Lee, J, Strynadka, N.C.J.
Deposit date:2022-05-24
Release date:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A novel class of broad-spectrum active-site-directed 3C-like protease inhibitors with nanomolar antiviral activity against highly immune-evasive SARS-CoV-2 Omicron subvariants.
Emerg Microbes Infect, 12, 2023
1S2M
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Crystal Structure of the DEAD box protein Dhh1p
Descriptor: Putative ATP-dependent RNA helicase DHH1
Authors:Cheng, Z, Song, H.
Deposit date:2004-01-09
Release date:2005-03-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure and functional analysis of DEAD-box protein Dhh1p.
Rna, 11, 2005
1QG1
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GROWTH FACTOR RECEPTOR BINDING PROTEIN SH2 DOMAIN COMPLEXED WITH AN SHC-DERIVED PEPTIDE
Descriptor: PROTEIN (GROWTH FACTOR RECEPTOR BINDING PROTEIN), PROTEIN (SHC-DERIVED PEPTIDE)
Authors:Ogura, K.
Deposit date:1999-04-19
Release date:1999-04-27
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of the SH2 domain of Grb2 complexed with the Shc-derived phosphotyrosine-containing peptide.
J.Mol.Biol., 289, 1999
1GUR
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GURMARIN, A SWEET TASTE-SUPPRESSING POLYPEPTIDE, NMR, 10 STRUCTURES
Descriptor: GURMARIN
Authors:Arai, K, Ishima, R, Morikawa, S, Imoto, T, Yoshimura, S, Aimoto, S, Akasaka, K.
Deposit date:1996-03-12
Release date:1996-08-01
Last modified:2019-12-25
Method:SOLUTION NMR
Cite:Three-dimensional structure of gurmarin, a sweet taste-suppressing polypeptide.
J.Biomol.NMR, 5, 1995
1HQO
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CRYSTAL STRUCTURE OF THE NITROGEN REGULATION FRAGMENT OF THE YEAST PRION PROTEIN URE2P
Descriptor: URE2 PROTEIN
Authors:Umland, T.C, Taylor, K.L, Rhee, S, Wickner, R.B, Davies, D.R.
Deposit date:2000-12-18
Release date:2001-02-14
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The crystal structure of the nitrogen regulation fragment of the yeast prion protein Ure2p.
Proc.Natl.Acad.Sci.USA, 98, 2001
1GPS
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SOLUTION STRUCTURE OF GAMMA 1-H AND GAMMA 1-P THIONINS FROM BARLEY AND WHEAT ENDOSPERM DETERMINED BY 1H-NMR: A STRUCTURAL MOTIF COMMON TO TOXIC ARTHROPOD PROTEINS
Descriptor: GAMMA-1-P THIONIN
Authors:Bruix, M, Jimenez, M.A, Santoro, J, Gonzalez, C, Colilla, F.J, Mendez, E, Rico, M.
Deposit date:1992-07-29
Release date:1993-10-31
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Solution structure of gamma 1-H and gamma 1-P thionins from barley and wheat endosperm determined by 1H-NMR: a structural motif common to toxic arthropod proteins.
Biochemistry, 32, 1993
1FY3
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[G175Q]HBP, A mutant of human heparin binding protein (CAP37)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Kastrup, J.S, Linde, V, Pedersen, A.K, Stoffer, B, Iversen, L.F, Larsen, I.K, Rasmussen, P.B, Flodgaard, H.J, Bjorn, S.E.
Deposit date:2000-09-28
Release date:2001-09-28
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Two mutants of human heparin binding protein (CAP37): toward the understanding of the nature of lipid A/LPS and BPTI binding.
Proteins, 42, 2001
1HNR
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H-NS (DNA-BINDING DOMAIN)
Descriptor: H-NS
Authors:Shindo, H, Iwaki, T, Ieda, R, Kurumizaka, H, Ueguchi, C, Mizuno, T, Morikawa, S, Nakamura, H, Kuboniwa, H.
Deposit date:1995-04-06
Release date:1995-07-10
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the DNA binding domain of a nucleoid-associated protein, H-NS, from Escherichia coli.
FEBS Lett., 360, 1995
1IRH
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The Solution Structure of The Third Kunitz Domain of Tissue Factor Pathway Inhibitor
Descriptor: tissue factor pathway inhibitor
Authors:Mine, S, Yamazaki, T, Miyata, T, Hara, S, Kato, H.
Deposit date:2001-10-02
Release date:2002-02-06
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structural mechanism for heparin-binding of the third Kunitz domain of human tissue factor pathway inhibitor.
Biochemistry, 41, 2002
1RHO
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STRUCTURE OF RHO GUANINE NUCLEOTIDE DISSOCIATION INHIBITOR
Descriptor: RHO GDP-DISSOCIATION INHIBITOR 1, SULFATE ION
Authors:Keep, N.H, Moody, P.C.E, Roberts, G.C.K.
Deposit date:1996-10-12
Release date:1997-10-15
Last modified:2019-08-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A modulator of rho family G proteins, rhoGDI, binds these G proteins via an immunoglobulin-like domain and a flexible N-terminal arm.
Structure, 5, 1997
1FY1
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[R23S,F25E]HBP, A MUTANT OF HUMAN HEPARIN BINDING PROTEIN (CAP37)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ETHANOL, ...
Authors:Kastrup, J.S, Linde, V, Pedersen, A.K, Stoffer, B, Iversen, L.F, Larsen, I.K, Rasmussen, P.B, Flodgaard, H.J, Bjorn, S.E.
Deposit date:2000-09-28
Release date:2001-09-28
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Two mutants of human heparin binding protein (CAP37): toward the understanding of the nature of lipid A/LPS and BPTI binding.
Proteins, 42, 2001
1TAP
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BU of 1tap by Molmil
NMR SOLUTION STRUCTURE OF RECOMBINANT TICK ANTICOAGULANT PROTEIN (RTAP), A FACTOR XA INHIBITOR FROM THE TICK ORNITHODOROS MOUBATA
Descriptor: FACTOR XA INHIBITOR
Authors:Antuch, W, Guntert, P, Billeter, M, Wuthrich, K.
Deposit date:1994-08-16
Release date:1994-11-30
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:NMR solution structure of the recombinant tick anticoagulant protein (rTAP), a factor Xa inhibitor from the tick Ornithodoros moubata.
FEBS Lett., 352, 1994
1PCA
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BU of 1pca by Molmil
THREE DIMENSIONAL STRUCTURE OF PORCINE PANCREATIC PROCARBOXYPEPTIDASE A. A COMPARISON OF THE A AND B ZYMOGENS AND THEIR DETERMINANTS FOR INHIBITION AND ACTIVATION
Descriptor: CITRIC ACID, PROCARBOXYPEPTIDASE A PCPA, VALINE, ...
Authors:Guasch, A, Coll, M, Aviles, F.X, Huber, R.
Deposit date:1991-10-28
Release date:1993-10-31
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Three-dimensional structure of porcine pancreatic procarboxypeptidase A. A comparison of the A and B zymogens and their determinants for inhibition and activation.
J.Mol.Biol., 224, 1992
1SM7
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BU of 1sm7 by Molmil
Solution structure of the recombinant pronapin precursor, BnIb.
Descriptor: recombinant Ib pronapin
Authors:Pantoja-Uceda, D, Palomares, O, Bruix, M, Villalba, M, Rodriguez, R, Rico, M, Santoro, J.
Deposit date:2004-03-08
Release date:2005-02-01
Last modified:2013-05-01
Method:SOLUTION NMR
Cite:Solution structure and stability against digestion of rproBnIb, a recombinant 2S albumin from rapeseed: relationship to its allergenic properties.
Biochemistry, 43, 2004
1KTH
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The Anisotropic Refinement Of Kunitz Type Domain C5 at 0.95 Angstrom
Descriptor: Collagen alpha 3(VI) chain, PHOSPHATE ION
Authors:Arnoux, B, Ducruix, A, Prange, T.
Deposit date:2002-01-16
Release date:2002-02-06
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Anisotropic behaviour of the C-terminal Kunitz-type domain of the alpha3 chain of human type VI collagen at atomic resolution (0.9 A).
Acta Crystallogr.,Sect.D, 58, 2002
1UEO
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Solution structure of the [T8A]-Penaeidin-3
Descriptor: Penaeidin-3a
Authors:Yang, Y, Poncet, J, Garnier, J, Zatylny, C, Bachere, E, Aumelas, A.
Deposit date:2003-05-20
Release date:2003-10-21
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of the recombinant penaeidin-3, a shrimp antimicrobial peptide
J.Biol.Chem., 278, 2003
6NY0
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Crystal structure of trimethoprim-resistant type II dihydrofolate reductase in complex with a bisbenzimidazole inhibitor
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, 2-(4-{3-[4-(6-carboxy-1H-benzimidazol-2-yl)phenoxy]-2-hydroxypropoxy}phenyl)-1H-benzimidazole-5-carboxylic acid, Dihydrofolate reductase type 2, ...
Authors:Yachnin, B.J, Berghuis, A.M.
Deposit date:2019-02-10
Release date:2019-05-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure-Based Design of Dimeric Bisbenzimidazole Inhibitors to an Emergent Trimethoprim-Resistant Type II Dihydrofolate Reductase Guides the Design of Monomeric Analogues.
Acs Omega, 4, 2019
8HEF
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The Crystal structure of deuterated S-217622 (Ensitrelvir) bound to the main protease (3CLpro/Mpro) of SARS-CoV-2
Descriptor: 3C-like proteinase, 6-[(6-chloranyl-2-methyl-indazol-5-yl)amino]-3-[(1-methyl-1,2,4-triazol-3-yl)methyl]-1-[[2,4,5-tris(fluoranyl)phenyl]methyl]-1,3,5-triazine-2,4-dione, GLYCEROL
Authors:Yan, M, Zhang, H.
Deposit date:2022-11-08
Release date:2023-04-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Synthesis of deuterated S-217622 (Ensitrelvir) with antiviral activity against coronaviruses including SARS-CoV-2.
Antiviral Res., 213, 2023
6N8B
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Crystal structure of transcription regulator AcaB from uropathogenic E. coli
Descriptor: CALCIUM ION, transcription regulator AcaB
Authors:Luo, Z, Hancock, S.J, Schembri, M.A, Kobe, B.
Deposit date:2018-11-29
Release date:2020-07-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:Comprehensive analysis of IncC plasmid conjugation identifies a crucial role for the transcriptional regulator AcaB.
Nat Microbiol, 5, 2020
6N8A
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Crystal structure of selenomethionine-containing AcaB from uropathogenic E. coli
Descriptor: CHLORIDE ION, transcription regulator AcaB
Authors:Luo, Z, Hancock, S.J, Schembri, M.A, Kobe, B.
Deposit date:2018-11-28
Release date:2020-07-15
Last modified:2021-01-27
Method:X-RAY DIFFRACTION (3.4011 Å)
Cite:Comprehensive analysis of IncC plasmid conjugation identifies a crucial role for the transcriptional regulator AcaB.
Nat Microbiol, 5, 2020
7TOB
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BU of 7tob by Molmil
Crystal structure of the SARS-CoV-2 Omicron main protease (Mpro) in complex with inhibitor GC376
Descriptor: (1S,2S)-2-({N-[(benzyloxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, 3C-like proteinase nsp5, DI(HYDROXYETHYL)ETHER
Authors:Sacco, M.D, Wang, J, Chen, Y.
Deposit date:2022-01-24
Release date:2022-02-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The P132H mutation in the main protease of Omicron SARS-CoV-2 decreases thermal stability without compromising catalysis or small-molecule drug inhibition.
Cell Res., 32, 2022
1AVA
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BU of 1ava by Molmil
AMY2/BASI PROTEIN-PROTEIN COMPLEX FROM BARLEY SEED
Descriptor: BARLEY ALPHA-AMYLASE 2(CV MENUET), BARLEY ALPHA-AMYLASE/SUBTILISIN INHIBITOR, CALCIUM ION
Authors:Vallee, F, Kadziola, A, Bourne, Y, Juy, M, Svensson, B, Haser, R.
Deposit date:1997-09-15
Release date:1999-03-16
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Barley alpha-amylase bound to its endogenous protein inhibitor BASI: crystal structure of the complex at 1.9 A resolution.
Structure, 6, 1998
1BAR
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THREE-DIMENSIONAL STRUCTURES OF ACIDIC AND BASIC FIBROBLAST GROWTH FACTORS
Descriptor: ACIDIC FIBROBLAST GROWTH FACTOR
Authors:Zhu, X, Komiya, H, Chirino, A, Faham, S, Fox, G.M, Arakawa, T, Hsu, B.T, Rees, D.C.
Deposit date:1992-09-29
Release date:1993-10-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Three-dimensional structures of acidic and basic fibroblast growth factors.
Science, 251, 1991
1BAS
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THREE-DIMENSIONAL STRUCTURES OF ACIDIC AND BASIC FIBROBLAST GROWTH FACTORS
Descriptor: BASIC FIBROBLAST GROWTH FACTOR
Authors:Chirino, A.J, Rees, D.C.
Deposit date:1992-09-29
Release date:1993-10-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Three-dimensional structures of acidic and basic fibroblast growth factors.
Science, 251, 1991

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