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2DU4	Crystal structure of Archaeoglobus fulgidus O-phosphoseryl-tRNA synthetase complexed with tRNACys Descriptor: O-phosphoseryl-tRNA synthetase, tRNA Authors: Fukunaga, R. Deposit date: 2006-07-20 Release date: 2007-03-13 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Structural insights into the first step of RNA-dependent cysteine biosynthesis in archaea. Nat.Struct.Mol.Biol., 14, 2007
2DU5	Crystal structure of Archaeoglobus fulgidus O-phosphoseryl-tRNA synthetase E418N/E420N mutant complexed with tRNAOpal and O-phosphoserine ("opal complex") Descriptor: O-phosphoseryl-tRNA synthetase, PHOSPHOSERINE, tRNA Authors: Fukunaga, R. Deposit date: 2006-07-20 Release date: 2007-03-13 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (3.2 Å) Cite: Structural insights into the first step of RNA-dependent cysteine biosynthesis in archaea. Nat.Struct.Mol.Biol., 14, 2007
2DU6	Crystal structure of Archaeoglobus fulgidus O-phosphoseryl-tRNA synthetase E418N/E420N mutant complexed with tRNAAmber and O-phosphoserine ("amber complex") Descriptor: O-phosphoseryl-tRNA synthetase, PHOSPHOSERINE, tRNA Authors: Fukunaga, R. Deposit date: 2006-07-20 Release date: 2007-03-13 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (3.3 Å) Cite: Structural insights into the first step of RNA-dependent cysteine biosynthesis in archaea. Nat.Struct.Mol.Biol., 14, 2007
2DU7	Crystal structure of Methanococcus jannacshii O-phosphoseryl-tRNA synthetase Descriptor: O-phosphoseryl-tRNA synthetase Authors: Fukunaga, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2006-07-20 Release date: 2007-03-13 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (3.6 Å) Cite: Structural insights into the first step of RNA-dependent cysteine biosynthesis in archaea. Nat.Struct.Mol.Biol., 14, 2007
2DU8	Crystal structure of human D-amino acid oxidase Descriptor: BENZOIC ACID, D-amino-acid oxidase, FLAVIN-ADENINE DINUCLEOTIDE Authors: Kawazoe, T, Tsuge, H, Fukui, K. Deposit date: 2006-07-20 Release date: 2006-11-21 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Crystal structure of human D-amino acid oxidase: Context-dependent variability of the backbone conformation of the VAAGL hydrophobic stretch located at the si-face of the flavin ring Protein Sci., 15, 2006
2DU9	crystal structure of the transcriptional factor from C.glutamicum Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Predicted transcriptional regulators Authors: Gao, Y, Yao, M, Tanaka, I. Deposit date: 2006-07-20 Release date: 2007-07-24 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (2.28 Å) Cite: The structures of transcription factor CGL2947 from Corynebacterium glutamicum in two crystal forms: A novel homodimer assembling and the implication for effector-binding mode Protein Sci., 16, 2007
2DUA	Crystal Structure of Phosphonopyruvate Hydrolase Complex with Oxalate and Mg++ Descriptor: CHLORIDE ION, MAGNESIUM ION, OXALATE ION, ... Authors: Herzberg, O, Chen, C. Deposit date: 2006-07-21 Release date: 2006-10-03 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2 Å) Cite: Structure and Kinetics of Phosphonopyruvate Hydrolase from Voriovorax sp. Pal2: New Insight into the Divergence of Catalysis within the PEP Mutase/Isocitrate Lyase Superfamily Biochemistry, 45, 2006
2DUB	ENOYL-COA HYDRATASE COMPLEXED WITH OCTANOYL-COA Descriptor: 2-ENOYL-COA HYDRATASE, OCTANOYL-COENZYME A Authors: Engel, C.K, Wierenga, R.K. Deposit date: 1997-04-28 Release date: 1998-04-29 Last modified: 2023-08-09 Method: X-RAY DIFFRACTION (2.4 Å) Cite: The crystal structure of enoyl-CoA hydratase complexed with octanoyl-CoA reveals the structural adaptations required for binding of a long chain fatty acid-CoA molecule. J.Mol.Biol., 275, 1998
2DUC	Crystal structure of SARS coronavirus main proteinase(3CLPRO) Descriptor: Replicase polyprotein 1ab Authors: Wang, H, Kim, Y.T, Muramatsu, T, Takemoto, C, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2006-07-21 Release date: 2007-07-24 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.7 Å) Cite: SARS-CoV 3CL protease cleaves its C-terminal autoprocessing site by novel subsite cooperativity Proc. Natl. Acad. Sci. U.S.A., 113, 2016
2DUD	Crystal structure of human mitochondrial single-stranded DNA-binding protein(hmtSSB) Descriptor: Single-stranded DNA-binding protein Authors: Dong, X, Bessho, Y, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2006-07-21 Release date: 2007-01-21 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Crystal structure of human mitochondrial single-stranded DNA-binding protein(hmtSSB) To be Published
2DUE	crystal structure of a green fluorescent protein variant S65T/H148D at pH 10 Descriptor: Green fluorescent protein Authors: Shu, X, Remington, S.J. Deposit date: 2006-07-23 Release date: 2007-07-10 Last modified: 2024-07-10 Method: X-RAY DIFFRACTION (1.24 Å) Cite: Ultrafast excited-state dynamics in the green fluorescent protein variant S65T/H148D. 1. Mutagenesis and structural studies. Biochemistry, 46, 2007
2DUF	crystal structure of a green fluorescent protein variant S65T/H148D at pH 5.6 Descriptor: Green fluorescent protein Authors: Shu, X, Remington, S.J. Deposit date: 2006-07-23 Release date: 2007-07-10 Last modified: 2024-07-10 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Ultrafast excited-state dynamics in the green fluorescent protein variant S65T/H148D. 1. Mutagenesis and structural studies. Biochemistry, 46, 2007
2DUG	crystal structure of a green fluorescent protein S65T/H148N at pH 5 Descriptor: Green fluorescent protein Authors: Shu, X, Remington, S.J. Deposit date: 2006-07-23 Release date: 2007-07-10 Last modified: 2024-07-10 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Ultrafast excited-state dynamics in the green fluorescent protein variant S65T/H148D. 1. Mutagenesis and structural studies. Biochemistry, 46, 2007
2DUH	crystal structure of a green fluorescent protein variant S65T/H148N at pH 9.5 Descriptor: Green fluorescent protein Authors: Shu, X, Remington, S.J. Deposit date: 2006-07-23 Release date: 2007-07-10 Last modified: 2024-07-10 Method: X-RAY DIFFRACTION (1.2 Å) Cite: Ultrafast excited-state dynamics in the green fluorescent protein variant S65T/H148D. 1. Mutagenesis and structural studies. Biochemistry, 46, 2007
2DUI	crystal structure of a green fluorescent protein variant H148D at pH 9 Descriptor: Green fluorescent protein Authors: Shu, X, Remington, S.J. Deposit date: 2006-07-23 Release date: 2007-07-10 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.36 Å) Cite: Ultrafast excited-state dynamics in the green fluorescent protein variant S65T/H148D. 1. Mutagenesis and structural studies. Biochemistry, 46, 2007
2DUJ	Crystal structure of the complex formed between proteinase K and a synthetic peptide Leu-Leu-Phe-Asn-Asp at 1.67 A resolution Descriptor: CALCIUM ION, LLFND, NITRATE ION, ... Authors: Singh, A.K, Singh, N, Somvanshi, R.K, Gupta, D, Sharma, S, Singh, T.P. Deposit date: 2006-07-23 Release date: 2006-08-08 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.67 Å) Cite: Crystal structure of the complex of proteinase K with a specific lactoferrin peptide Val-Leu-Leu-His at 1.93 A resolution To be Published
2DUK	Crystal structure of MS0616 Descriptor: MS0616 Authors: Hosaka, T, Nishino, A, Uchikubo, K.-T, Kishishita, S, Murayama, K, Shirouzu, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2006-07-24 Release date: 2007-01-24 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.62 Å) Cite: Crystal structure of MS0616 To be Published
2DUL	Crystal structure of tRNA G26 methyltransferase Trm1 in apo form from Pyrococcus horikoshii Descriptor: GLYCEROL, N(2),N(2)-dimethylguanosine tRNA methyltransferase Authors: Ihsanawati, Shirouzu, M, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2006-07-24 Release date: 2007-01-24 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Crystal Structure of tRNA N(2),N(2)-Guanosine Dimethyltransferase Trm1 from Pyrococcus horikoshii J.Mol.Biol., 383, 2008
2DUM	Crystal structure of hypothetical protein, PH0823 Descriptor: Hypothetical protein PH0823 Authors: Hosaka, T, Kishishita, S, Murayama, K, Shirouzu, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2006-07-24 Release date: 2007-01-24 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.75 Å) Cite: Crystal structure of hypothetical protein, PH0823 To be Published
2DUN	Solution structure of BRCT domain of DNA polymerase mu Descriptor: DNA polymerase mu Authors: Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2006-07-25 Release date: 2007-01-25 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of BRCT domain of DNA polymerase mu To be Published
2DUO	Crystal structure of VIP36 exoplasmic/lumenal domain, Ca2+-bound form Descriptor: CALCIUM ION, CHLORIDE ION, Vesicular integral-membrane protein VIP36 Authors: Satoh, T, Cowieson, N.P, Kato, R, Wakatsuki, S. Deposit date: 2006-07-25 Release date: 2007-07-24 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structural basis for recognition of high mannose type glycoproteins by mammalian transport lectin VIP36 J.Biol.Chem., 282, 2007
2DUP	Crystal structure of VIP36 exoplasmic/lumenal domain, metal-free form Descriptor: CALCIUM ION, CHLORIDE ION, GLYCEROL, ... Authors: Satoh, T, Cowieson, N.P, Kato, R, Wakatsuki, S. Deposit date: 2006-07-25 Release date: 2007-07-24 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structural basis for recognition of high mannose type glycoproteins by mammalian transport lectin VIP36 J.Biol.Chem., 282, 2007
2DUQ	Crystal structure of VIP36 exoplasmic/lumenal domain, Ca2+/Man-bound form Descriptor: CALCIUM ION, CHLORIDE ION, Vesicular integral-membrane protein VIP36, ... Authors: Satoh, T, Cowieson, N.P, Kato, R, Wakatsuki, S. Deposit date: 2006-07-25 Release date: 2007-07-24 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structural basis for recognition of high mannose type glycoproteins by mammalian transport lectin VIP36 J.Biol.Chem., 282, 2007
2DUR	Crystal structure of VIP36 exoplasmic/lumenal domain, Ca2+/Man2-bound form Descriptor: CALCIUM ION, CHLORIDE ION, GLYCEROL, ... Authors: Satoh, T, Cowieson, N.P, Kato, R, Wakatsuki, S. Deposit date: 2006-07-25 Release date: 2007-07-24 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.65 Å) Cite: Structural basis for recognition of high mannose type glycoproteins by mammalian transport lectin VIP36 J.Biol.Chem., 282, 2007
2DUT	Crystal structure of a M-loop deletion variant of MENT in the native conformation Descriptor: Heterochromatin-associated protein MENT Authors: Whisstock, J.C, Buckle, A.M, McGowan, S, Irving, J.A. Deposit date: 2006-07-26 Release date: 2006-08-08 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (3 Å) Cite: X-ray crystal structure of MENT: evidence for functional loop-sheet polymers in chromatin condensation Embo J., 25, 2006

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