Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4U0I
DownloadVisualize
BU of 4u0i by Molmil
Crystal structure of KIT in complex with ponatinib
Descriptor: 3-(imidazo[1,2-b]pyridazin-3-ylethynyl)-4-methyl-N-{4-[(4-methylpiperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl}benzam ide, Mast/stem cell growth factor receptor Kit,Mast/stem cell growth factor receptor Kit, PHOSPHATE ION
Authors:Zhou, T, Zhu, X, Dalgarno, D.C.
Deposit date:2014-07-11
Release date:2014-10-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Ponatinib Inhibits Polyclonal Drug-Resistant KIT Oncoproteins and Shows Therapeutic Potential in Heavily Pretreated Gastrointestinal Stromal Tumor (GIST) Patients.
Clin.Cancer Res., 20, 2014
2CV1
DownloadVisualize
BU of 2cv1 by Molmil
Glutamyl-tRNA synthetase from Thermus thermophilus in complex with tRNA(Glu), ATP, and an analog of L-glutamate: a quaternary complex
Descriptor: (4S)-4-AMINO-5-HYDROXYPENTANOIC ACID, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Sekine, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-31
Release date:2006-09-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Glutamyl-tRNA synthetase from Thermus thermophilus in complex with tRNA(Glu), ATP, and an analog of L-glutamate: a quaternary complex
To be Published
4U0S
DownloadVisualize
BU of 4u0s by Molmil
Structure of Eukaryotic fic domain containing protein with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Adenosine monophosphate-protein transferase FICD, MAGNESIUM ION, ...
Authors:Cole, A.R, Katan, M, Bunney, T.D.
Deposit date:2014-07-14
Release date:2014-12-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Crystal structure of the human, FIC-domain containing protein HYPE and implications for its functions.
Structure, 22, 2014
4U10
DownloadVisualize
BU of 4u10 by Molmil
Probing the structure and mechanism of de-N-acetylase from aggregatibacter actinomycetemcomitans
Descriptor: CHLORIDE ION, Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase, ZINC ION
Authors:Varudharasu, D, Narayanan, R.
Deposit date:2014-07-14
Release date:2015-01-14
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Probing the structure and mechanism of de-N-acetylase from aggregatibacter actinomycetemcomitans
To Be Published
4U7L
DownloadVisualize
BU of 4u7l by Molmil
LRIG1 extracellular domain: Structure and Function Analysis
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Xu, Y.
Deposit date:2014-07-31
Release date:2015-04-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:LRIG1 Extracellular Domain: Structure and Function Analysis.
J.Mol.Biol., 427, 2015
4U8H
DownloadVisualize
BU of 4u8h by Molmil
Crystal Structure of Mammalian Period-Cryptochrome Complex
Descriptor: Cryptochrome-2, Period circadian protein homolog 2, ZINC ION
Authors:Nangle, S.N, Rosensweig, C, Koike, N, Tei, H, Takahashi, J.S, Green, C.B, Zheng, N.
Deposit date:2014-08-03
Release date:2014-10-01
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.798 Å)
Cite:Molecular assembly of the period-cryptochrome circadian transcriptional repressor complex.
Elife, 3, 2014
4U75
DownloadVisualize
BU of 4u75 by Molmil
HsMetAP (F309M) in complex with Methionine
Descriptor: COBALT (II) ION, GLYCEROL, METHIONINE, ...
Authors:Arya, T, Addlagatta, A.
Deposit date:2014-07-30
Release date:2015-03-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Identification of the Molecular Basis of Inhibitor Selectivity between the Human and Streptococcal Type I Methionine Aminopeptidases
J.Med.Chem., 58, 2015
4TYZ
DownloadVisualize
BU of 4tyz by Molmil
Crystal structure of the C-terminal domain of an unknown protein from Leishmania infantum
Descriptor: 1,2-ETHANEDIOL, Uncharacterized protein
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2014-07-09
Release date:2014-08-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of the C-terminal domain of an unknown protein from Leishmania infantum
to be published
4U6E
DownloadVisualize
BU of 4u6e by Molmil
HsMetAP in complex with (amino(phenyl)methyl)phosphonic acid
Descriptor: COBALT (II) ION, Methionine aminopeptidase 1, [(R)-amino(phenyl)methyl]phosphonic acid
Authors:Arya, T, Addlagatta, A.
Deposit date:2014-07-28
Release date:2015-03-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Identification of the Molecular Basis of Inhibitor Selectivity between the Human and Streptococcal Type I Methionine Aminopeptidases
J.Med.Chem., 58, 2015
4U6Z
DownloadVisualize
BU of 4u6z by Molmil
HsMetAP(F309M) in complex with 1-amino-2-propylpentyl)phosphonic acid
Descriptor: COBALT (II) ION, GLYCEROL, Methionine aminopeptidase 1, ...
Authors:Arya, T, Addlagatta, A.
Deposit date:2014-07-30
Release date:2015-04-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Identification of the Molecular Basis of Inhibitor Selectivity between the Human and Streptococcal Type I Methionine Aminopeptidases
J.Med.Chem., 58, 2015
4TX4
DownloadVisualize
BU of 4tx4 by Molmil
Crystal Structure of a Single-Domain Cysteine Protease Inhibitor from Cowpea (Vigna unguiculata)
Descriptor: Cysteine proteinase inhibitor, SULFATE ION
Authors:Pereira, H.M, Valadares, N, Monteiro-Junior, J.E, Carvalho, C.P.S, Grangeiro, T.B.
Deposit date:2014-07-02
Release date:2015-10-14
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Expression in Escherichia coli of cysteine protease inhibitors from cowpea (Vigna unguiculata): The crystal structure of a single-domain cystatin gives insights on its thermal and pH stability.
Int. J. Biol. Macromol., 102, 2017
4TX9
DownloadVisualize
BU of 4tx9 by Molmil
Crystal structure of HisAp from Streptomyces sviceus with degraded ProFAR
Descriptor: AMINOIMIDAZOLE 4-CARBOXAMIDE RIBONUCLEOTIDE, Phosphoribosyl isomerase A, SULFATE ION
Authors:Michalska, K, Verduzco-Castro, E.A, Endres, M, Barona-Gomez, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-07-02
Release date:2014-08-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Co-occurrence of analogous enzymes determines evolution of a novel ( beta alpha )8-isomerase sub-family after non-conserved mutations in flexible loop.
Biochem. J., 473, 2016
1J4G
DownloadVisualize
BU of 1j4g by Molmil
crystal structure analysis of the trichosanthin delta C7
Descriptor: CALCIUM ION, Trichosanthin delta C7
Authors:Ding, Y, Too, H.M, Wang, Z.L, Liu, Y.W, Dong, Y.C, Shaw, P.C, Rao, Z.H.
Deposit date:2001-09-30
Release date:2001-10-24
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:crystal structure analysis of the trichosanthin delta C7
To be Published
1JOB
DownloadVisualize
BU of 1job by Molmil
Crystal Structure of Murine Olfactory Marker Protein in Spacegroup P3121
Descriptor: Olfactory Marker Protein, ZINC ION
Authors:Smith, P, Hunt, J.F.
Deposit date:2001-07-27
Release date:2001-08-22
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The crystal structure of the olfactory marker protein at 2.3 A resolution.
J.Mol.Biol., 319, 2002
5IXE
DownloadVisualize
BU of 5ixe by Molmil
1.75A RESOLUTION STRUCTURE OF 5-Fluoroindole BOUND BETA-GLYCOSIDASE (W33G) FROM SULFOLOBUS SOLFATARICUS
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 5-fluoro-1H-indole, Beta-galactosidase, ...
Authors:Lovell, S, Battaile, K.P, Mehzabeen, N, Budiardjo, S.J, Karanicolas, J.
Deposit date:2016-03-23
Release date:2016-07-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Full and Partial Agonism of a Designed Enzyme Switch.
ACS Synth Biol, 5, 2016
8AG6
DownloadVisualize
BU of 8ag6 by Molmil
human MutSalpha (MSH2/MSH6) binding to DNA with a GT mismatch
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA (50-MER), DNA mismatch repair protein Msh2, ...
Authors:Bruekner, S.R, Sixma, T.K.
Deposit date:2022-07-19
Release date:2023-01-25
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Unexpected moves: a conformational change in MutS alpha enables high-affinity DNA mismatch binding.
Nucleic Acids Res., 51, 2023
6XNQ
DownloadVisualize
BU of 6xnq by Molmil
Crystal Structure of Argininosuccinate synthase from Legionella pneumophila Philadelphia 1
Descriptor: 1,2-ETHANEDIOL, Argininosuccinate synthase, SULFATE ION
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2020-07-03
Release date:2020-07-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal Structure of Argininosuccinate synthase from Legionella pneumophila Philadelphia 1
to be published
2DXI
DownloadVisualize
BU of 2dxi by Molmil
2.2 A crystal structure of glutamyl-tRNA synthetase from Thermus thermophilus complexed with tRNA(Glu), ATP, and L-glutamol
Descriptor: (4S)-4-AMINO-5-HYDROXYPENTANOIC ACID, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Sekine, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-08-28
Release date:2006-10-31
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural bases of transfer RNA-dependent amino acid recognition and activation by glutamyl-tRNA synthetase
Structure, 14, 2006
6XOD
DownloadVisualize
BU of 6xod by Molmil
Crystal structure of the PEX4-PEX22 protein complex from Arabidopsis thaliana
Descriptor: Peroxisome biogenesis protein 22, Protein PEROXIN-4
Authors:Olmos Jr, J.L, Bradford, S.E, Miller, M.D, Xu, W, Wright, Z.J, Bartel, B, Phillips Jr, G.N.
Deposit date:2020-07-06
Release date:2021-07-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:The Structure of the Arabidopsis PEX4-PEX22 Peroxin Complex-Insights Into Ubiquitination at the Peroxisomal Membrane
Front Cell Dev Biol, 10, 2022
5CZP
DownloadVisualize
BU of 5czp by Molmil
70S termination complex containing E. coli RF2
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Hoffer, E.D, Dunham, C.M.
Deposit date:2015-07-31
Release date:2016-10-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.29995918 Å)
Cite:Uniformity of Peptide Release Is Maintained by Methylation of Release Factors.
Cell Rep, 17, 2016
5SYZ
DownloadVisualize
BU of 5syz by Molmil
Human Liver Receptor Homologue-1 (LRH-1) Bound to a RJW100 stereoisomer and a Fragment of TIF-2
Descriptor: (1S,3aR,6aR)-5-hexyl-4-phenyl-3a-(1-phenylethenyl)-1,2,3,3a,6,6a-hexahydropentalen-1-ol, Nuclear receptor coactivator 2, Nuclear receptor subfamily 5 group A member 2
Authors:Ortlund, E.A, Mays, S.G.
Deposit date:2016-08-12
Release date:2016-10-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9261 Å)
Cite:Crystal Structures of the Nuclear Receptor, Liver Receptor Homolog 1, Bound to Synthetic Agonists.
J. Biol. Chem., 291, 2016
5DAT
DownloadVisualize
BU of 5dat by Molmil
Complex of yeast 80S ribosome with hypusine-containing eIF5A
Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
Authors:Melnikov, S, Mailliot, J, Shin, B.-S, Rigger, L, Yusupova, G, Micura, R, Dever, T.E, Yusupov, M.
Deposit date:2015-08-20
Release date:2016-08-31
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome
To Be Published
5DGE
DownloadVisualize
BU of 5dge by Molmil
Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome
Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
Authors:Melnikov, S, Mailliot, J, Shin, B.-S, Rigger, L, Yusupova, G, Micura, R, Dever, T.E, Yusupov, M.
Deposit date:2015-08-27
Release date:2017-01-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome
To Be Published
5DFE
DownloadVisualize
BU of 5dfe by Molmil
70S termination complex containing E. coli RF2
Descriptor: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Hoffer, E.D, Dunham, C.M.
Deposit date:2015-08-26
Release date:2016-10-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.09997559 Å)
Cite:Uniformity of Peptide Release Is Maintained by Methylation of Release Factors.
Cell Rep, 17, 2016
8C1C
DownloadVisualize
BU of 8c1c by Molmil
Structure of IgE bound to the ectodomain of FceRIa
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, High affinity immunoglobulin epsilon receptor subunit alpha, ...
Authors:Andersen, G.R, Jensen, R.K.
Deposit date:2022-12-20
Release date:2023-03-29
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structure of IgE bound to the ectodomain of FceRIa
To Be Published

226262

PDB entries from 2024-10-16

PDB statisticsPDBj update infoContact PDBjnumon