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6M7Y
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BU of 6m7y by Molmil
Dehydratase, NisB, bound to a non-eliminable substrate analog
Descriptor: Lantibiotic, Nisin biosynthesis protein NisB
Authors:Cogan, D.P, Nair, S.K.
Deposit date:2018-08-21
Release date:2019-08-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.794 Å)
Cite:Characterization of glutamyl-tRNA-dependent dehydratases using nonreactive substrate mimics.
Proc.Natl.Acad.Sci.USA, 116, 2019
7WG4
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BU of 7wg4 by Molmil
DVAA-KlAte1
Descriptor: Arginyltransferase, ZINC ION
Authors:Kim, M.K, Kim, B.H, Oh, S.-J, Song, H.K.
Deposit date:2021-12-28
Release date:2022-09-14
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Crystal structure of the Ate1 arginyl-tRNA-protein transferase and arginylation of N-degron substrates.
Proc.Natl.Acad.Sci.USA, 119, 2022
7WG2
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BU of 7wg2 by Molmil
EVAA-KlAte1
Descriptor: Arginyltransferase, ZINC ION
Authors:Kim, M.K, Kim, B.H, Oh, S.-J, Song, H.K.
Deposit date:2021-12-28
Release date:2022-09-14
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Crystal structure of the Ate1 arginyl-tRNA-protein transferase and arginylation of N-degron substrates.
Proc.Natl.Acad.Sci.USA, 119, 2022
7WG1
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BU of 7wg1 by Molmil
DVAA-KlAte1
Descriptor: Arginyltransferase, ZINC ION
Authors:Kim, M.K, Kim, B.H, Oh, S.-J, Song, H.K.
Deposit date:2021-12-27
Release date:2022-09-14
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Crystal structure of the Ate1 arginyl-tRNA-protein transferase and arginylation of N-degron substrates.
Proc.Natl.Acad.Sci.USA, 119, 2022
1RNA
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BU of 1rna by Molmil
CRYSTALLOGRAPHIC STRUCTURE OF AN RNA HELIX: [U(U-A)6A]2
Descriptor: RNA (5'-R(*UP*UP*AP*UP*AP*UP*AP*UP*AP*UP*AP*UP*AP*A)-3')
Authors:Dock-Bregeon, A.C, Chevrier, B, Podjarny, A, Johnson, J, De Bear, J.S, Gough, G.R, Gilham, P.T, Moras, D.
Deposit date:1990-02-01
Release date:1991-04-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystallographic structure of an RNA helix: [U(UA)6A]2.
J.Mol.Biol., 209, 1989
2N3R
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BU of 2n3r by Molmil
NMR structure of the II-III-VI three-way junction from the VS ribozyme and identification of magnesium-binding sites using paramagnetic relaxation enhancement
Descriptor: MAGNESIUM ION, RNA (62-MER)
Authors:Bonneau, E, Girard, N, Lemieux, S, Legault, P.
Deposit date:2015-06-09
Release date:2015-07-15
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The NMR structure of the II-III-VI three-way junction from the Neurospora VS ribozyme reveals a critical tertiary interaction and provides new insights into the global ribozyme structure.
Rna, 21, 2015
8J6V
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BU of 8j6v by Molmil
Structure of yeast Arginyl-tRNA-protein transferase 1
Descriptor: arginyltransferase
Authors:Yashiro, Y, Tomita, K.
Deposit date:2023-04-26
Release date:2023-06-07
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structure of Arginyl-tRNA-protein transferase 1
To Be Published
8OQI
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BU of 8oqi by Molmil
Cryo-EM structure of the wild-type alpha-synuclein fibril.
Descriptor: Alpha-synuclein
Authors:Pesch, V, Reithofer, S, Ma, L, Flores-Fernandez, J.M, Oezduezenciler, P, Busch, Y, Lien, Y, Rudtke, O, Frieg, B, Schroeder, G.F, Wille, H, Tamgueney, G.
Deposit date:2023-04-12
Release date:2024-03-13
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Vaccination with structurally adapted fungal protein fibrils induces immunity to Parkinson's disease.
Brain, 147, 2024
4HI6
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BU of 4hi6 by Molmil
Crystal structure of H112W mutant of borna disease virus matrix protein
Descriptor: CHLORIDE ION, GUANOSINE-3'-MONOPHOSPHATE, Matrix protein
Authors:Dautel, P, Kolenko, P, Stubbs, M.T.
Deposit date:2012-10-11
Release date:2013-10-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Matrix protein variants provide support for alternative Borna disease virus infection pathway
To be Published
4HIY
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BU of 4hiy by Molmil
crystal structure of R34/53A, D95N, H112W mutant of borna disease virus matrix protein
Descriptor: Matrix protein, SULFATE ION
Authors:Dautel, P, Kolenko, P, Stubbs, M.T.
Deposit date:2012-10-12
Release date:2013-10-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.31 Å)
Cite:Matrix protein variants provide support for alternative borna disease virus infection pathway
To be Published
4HIU
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BU of 4hiu by Molmil
Crystal structure of R34/53A mutant of borna disease virus matrix protein
Descriptor: CYTIDINE-5'-MONOPHOSPHATE, GUANOSINE-5'-MONOPHOSPHATE, Matrix protein
Authors:Dautel, P, Kolenko, P, Stubbs, M.T.
Deposit date:2012-10-12
Release date:2013-10-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Matrix protein variants provide support for alternative borna disease virus infection pathway
To be Published
4HIW
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BU of 4hiw by Molmil
Crystal structure of R34/53A, H112W mutant of borna disease virus matrix protein
Descriptor: Matrix protein
Authors:Dautel, P, Kolenko, P, Stubbs, M.T.
Deposit date:2012-10-12
Release date:2013-10-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Matrix protein variants provide support for alternative borna disease virus infection pathway
To be Published
4HI5
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BU of 4hi5 by Molmil
crystal structure of F37A mutant of borna disease virus matrix protein
Descriptor: CYTIDINE-5'-MONOPHOSPHATE, Matrix protein
Authors:Dautel, P, Kolenko, P, Stubbs, M.T.
Deposit date:2012-10-11
Release date:2013-10-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Matrix protein variants provide support for alternative borna disease virus infection pathway
To be Published
4HIT
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BU of 4hit by Molmil
Crystal structure of H112W mutant of borna disease virus matrix protein
Descriptor: CHLORIDE ION, Matrix protein, SULFATE ION
Authors:Dautel, P, Kolenko, P, Stubbs, M.T.
Deposit date:2012-10-12
Release date:2013-10-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Matrix protein variants provide support for alternative borna disease virus infection pathway
To be Published
2M1V
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BU of 2m1v by Molmil
NMR solution structure of the d3'-hairpin from the Sc.ai5gamma group II intron including the EBS1:dIBS1 RNA:DNA hybrid
Descriptor: DNA_(5'-D(*CP*AP*GP*TP*GP*TP*C)-3')_, RNA (29-MER)
Authors:Skilandat, M, Sigel, R.K.O.
Deposit date:2012-12-07
Release date:2014-06-11
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The Role of Mg(II) in DNA Cleavage Site Recognition in Group II Intron Ribozymes: SOLUTION STRUCTURE AND METAL ION BINDING SITES OF THE RNADNA COMPLEX.
J.Biol.Chem., 289, 2014
2M58
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BU of 2m58 by Molmil
Structure of 2'-5' AG1 lariat forming ribozyme in its inactive state
Descriptor: RNA (59-MER)
Authors:Carlomagno, T, Amata, I, Codutti, L, Falb, M, Fohrer, J, Simon, B.
Deposit date:2013-02-18
Release date:2013-04-03
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural principles of RNA catalysis in a 2'-5' lariat-forming ribozyme.
J.Am.Chem.Soc., 135, 2013
5UZ6
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BU of 5uz6 by Molmil
RNA hairpin structure containing 2-MeImp-oligo analogue
Descriptor: RNA (25-MER), RNA (5'-D(*(8OS))-R(P*CP*AP*CP*CP*UP*CP*A)-3')
Authors:Zhang, W, Oh, S.S, Szostak, J.W.
Deposit date:2017-02-24
Release date:2018-02-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Rationale for the Enhanced Catalysis of Nonenzymatic RNA Primer Extension by a Downstream Oligonucleotide.
J. Am. Chem. Soc., 140, 2018
1Q11
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BU of 1q11 by Molmil
Crystal structure of an active fragment of human tyrosyl-tRNA synthetase with tyrosinol
Descriptor: 4-[(2S)-2-amino-3-hydroxypropyl]phenol, GLYCEROL, PHOSPHATE ION, ...
Authors:Yang, X.-L, Schimmel, P, Ribas de Pouplana, L.
Deposit date:2003-07-18
Release date:2004-01-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures that suggest late development of genetic code components for differentiating aromatic side chains
Proc.Natl.Acad.Sci.USA, 100, 2003
5VGW
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BU of 5vgw by Molmil
RNA hairpin structure containing tetraloop/receptor motif
Descriptor: RNA (5'-R(*CP*UP*GP*CP*UP*GP*GP*CP*UP*AP*AP*GP*GP*CP*CP*CP*GP*AP*AP*AP*GP*G)-3'), RNA (5'-R(P*GP*CP*UP*AP*UP*GP*CP*CP*UP*GP*CP*UP*G)-3')
Authors:Zhang, W, Szostak, J.W.
Deposit date:2017-04-11
Release date:2018-02-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Structural Rationale for the Enhanced Catalysis of Nonenzymatic RNA Primer Extension by a Downstream Oligonucleotide.
J. Am. Chem. Soc., 140, 2018
2QUX
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BU of 2qux by Molmil
PP7 coat protein dimer in complex with RNA hairpin
Descriptor: Coat protein, GLYCEROL, RNA (25-MER)
Authors:Chao, J.A.
Deposit date:2007-08-06
Release date:2007-12-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Structural basis for the coevolution of a viral RNA-protein complex.
Nat.Struct.Mol.Biol., 15, 2008
3WNC
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BU of 3wnc by Molmil
Crystal structure of EF-Pyl in complex with GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Protein translation elongation factor 1A
Authors:Yanagisawa, T, Ishii, R, Fukunaga, R, Sengoku, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2013-12-08
Release date:2014-12-10
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A SelB/EF-Tu/aIF2 gamma-like protein from Methanosarcina mazei in the GTP-bound form binds cysteinyl-tRNA(Cys.).
J. Struct. Funct. Genomics, 16, 2015
3WNB
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BU of 3wnb by Molmil
Crystal structure of EF-Pyl in complex with GMPPNP
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Protein translation elongation factor 1A
Authors:Yanagisawa, T, Ishii, R, Fukunaga, R, Sengoku, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2013-12-08
Release date:2014-12-10
Last modified:2020-05-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A SelB/EF-Tu/aIF2 gamma-like protein from Methanosarcina mazei in the GTP-bound form binds cysteinyl-tRNA(Cys.).
J. Struct. Funct. Genomics, 16, 2015
5SB8
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BU of 5sb8 by Molmil
Tubulin-maytansinoid-3-complex
Descriptor: (1S,2R,3S,5S,6S,16E,18E,20R)-11-chloro-6-hydroxy-12,20-dimethoxy-2,5,9,16-tetramethyl-4,24-dioxa-9,22-diazatetracyclo[19.3.1.1~10,14~.0~3,5~]hexacosa-10(26),11,13,16,18,21-hexaene-8,23-dione, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Marzullo, P, Boiarska, Z, Perez-Pena, H, Abel, A.-C, Alvarez-Bernad, B, Lucena-Agell, D, Vasile, F, Sironi, M, Steinmetz, M.O, Prota, A.E, Diaz, J.F, Pieraccini, S, Passarella, D.
Deposit date:2021-07-20
Release date:2021-12-08
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Maytansinol Derivatives: Side Reactions as a Chance for New Tubulin Binders.
Chemistry, 28, 2022
5SBD
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BU of 5sbd by Molmil
Tubulin-maytansinoid-5b-complex
Descriptor: (1S,2R,3S,5S,6S,16E,18E,20R)-11-chloro-12,20-dimethoxy-2,5,9,16-tetramethyl-8,23-dioxo-4,24-dioxa-9,22-diazatetracyclo[19.3.1.1~10,14~.0~3,5~]hexacosa-10(26),11,13,16,18,21(25)-hexaen-6-yl acetate, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Marzullo, P, Boiarska, Z, Perez-Pena, H, Abel, A.-C, Alvarez-Bernad, B, Lucena-Agell, D, Vasile, F, Sironi, M, Steinmetz, M.O, Prota, A.E, Diaz, J.F, Pieraccini, S, Passarella, D.
Deposit date:2021-07-20
Release date:2021-12-08
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Maytansinol Derivatives: Side Reactions as a Chance for New Tubulin Binders.
Chemistry, 28, 2022
5SBA
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BU of 5sba by Molmil
Tubulin-maytansinoid-4b-complex
Descriptor: (1S,2R,3S,5S,6S,16E,18E,20R,21S)-11-chloro-21-hydroxy-12,20-dimethoxy-2,5,9,16-tetramethyl-8,23-dioxo-4,24-dioxa-9,22-diazatetracyclo[19.3.1.1~10,14~.0~3,5~]hexacosa-10(26),11,13,16,18-pentaen-6-yl acetate, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Marzullo, P, Boiarska, Z, Perez-Pena, H, Abel, A.-C, Alvarez-Bernad, B, Lucena-Agell, D, Vasile, F, Sironi, M, Steinmetz, M.O, Prota, A.E, Diaz, J.F, Pieraccini, S, Passarella, D.
Deposit date:2021-07-20
Release date:2021-12-08
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Maytansinol Derivatives: Side Reactions as a Chance for New Tubulin Binders.
Chemistry, 28, 2022

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