Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2VX9
DownloadVisualize
BU of 2vx9 by Molmil
H. salinarum dodecin E45A mutant
Descriptor: CHLORIDE ION, DODECIN, RIBOFLAVIN, ...
Authors:Grininger, M, Staudt, H, Johansson, P, Wachtveitl, J, Oesterhelt, D.
Deposit date:2008-07-01
Release date:2009-02-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Dodecin is the Key Player in Flavin Homeostasis of Archaea.
J.Biol.Chem., 284, 2009
2VXA
DownloadVisualize
BU of 2vxa by Molmil
H. halophila dodecin in complex with riboflavin
Descriptor: CHLORIDE ION, DODECIN, RIBOFLAVIN
Authors:Grininger, M, Staudt, H, Johansson, P, Wachtveitl, J, Oesterhelt, D.
Deposit date:2008-07-01
Release date:2009-02-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Dodecin is the Key Player in Flavin Homeostasis of Archaea.
J.Biol.Chem., 284, 2009
2GB8
DownloadVisualize
BU of 2gb8 by Molmil
Solution structure of the complex between yeast iso-1-cytochrome c and yeast cytochrome c peroxidase
Descriptor: Cytochrome c iso-1, Cytochrome c peroxidase, HEME C, ...
Authors:Volkov, A.N, Worrall, J.A.R, Ubbink, M.
Deposit date:2006-03-10
Release date:2006-11-21
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Solution structure and dynamics of the complex between cytochrome c and cytochrome c peroxidase determined by paramagnetic NMR.
Proc.Natl.Acad.Sci.Usa, 103, 2006
5IUL
DownloadVisualize
BU of 5iul by Molmil
Crystal structure of the DesK-DesR complex in the phosphotransfer state with high Mg2+ (150 mM) and BeF3
Descriptor: MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, POTASSIUM ION, ...
Authors:Trajtenberg, F, Imelio, J.A, Larrieux, N, Buschiazzo, A.
Deposit date:2016-03-18
Release date:2016-12-21
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.153 Å)
Cite:Regulation of signaling directionality revealed by 3D snapshots of a kinase:regulator complex in action.
Elife, 5, 2016
5IUJ
DownloadVisualize
BU of 5iuj by Molmil
Crystal structure of the DesK-DesR complex in the phosphotransfer state with low Mg2+ (20 mM)
Descriptor: MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, POTASSIUM ION, ...
Authors:Trajtenberg, F, Imelio, J.A, Larrieux, N, Buschiazzo, A.
Deposit date:2016-03-18
Release date:2016-12-21
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Regulation of signaling directionality revealed by 3D snapshots of a kinase:regulator complex in action.
Elife, 5, 2016
5IUK
DownloadVisualize
BU of 5iuk by Molmil
Crystal structure of the DesK-DesR complex in the phosphotransfer state with high Mg2+ (150 mM)
Descriptor: MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, POTASSIUM ION, ...
Authors:Trajtenberg, F, Imelio, J.A, Larrieux, N, Buschiazzo, A.
Deposit date:2016-03-18
Release date:2016-12-21
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Regulation of signaling directionality revealed by 3D snapshots of a kinase:regulator complex in action.
Elife, 5, 2016
5IUM
DownloadVisualize
BU of 5ium by Molmil
Crystal structure of phosphorylated DesKC
Descriptor: GLYCEROL, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
Authors:Trajtenberg, F, Buschiazzo, A.
Deposit date:2016-03-18
Release date:2016-12-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.162 Å)
Cite:Regulation of signaling directionality revealed by 3D snapshots of a kinase:regulator complex in action.
Elife, 5, 2016
2JTI
DownloadVisualize
BU of 2jti by Molmil
Solution structure of the yeast iso-1-cytochrome c (T12A) : yeast cytochrome c peroxidase complex
Descriptor: Cytochrome c iso-1, Cytochrome c peroxidase, mitochondrial, ...
Authors:Ubbink, M, Volkov, A.N.
Deposit date:2007-08-01
Release date:2008-07-22
Last modified:2021-10-20
Method:SOLUTION NMR
Cite:Shifting the equilibrium between the encounter state and the specific form of a protein complex by interfacial point mutations.
J.Am.Chem.Soc., 132, 2010
4RYF
DownloadVisualize
BU of 4ryf by Molmil
ClpP1/2 heterocomplex from Listeria monocytogenes
Descriptor: ATP-dependent Clp protease proteolytic subunit, MALONATE ION, SODIUM ION
Authors:Dahmen, M, Vielberg, M.-T, Groll, M, Sieber, S.A.
Deposit date:2014-12-15
Release date:2014-12-31
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure and mechanism of the caseinolytic protease ClpP1/2 heterocomplex from Listeria monocytogenes.
Angew.Chem.Int.Ed.Engl., 54, 2015
6TTY
DownloadVisualize
BU of 6tty by Molmil
Structure of ClpP from Staphylococcus aureus (apo, closed state)
Descriptor: ATP-dependent Clp protease proteolytic subunit
Authors:Malik, I.T, Pereira, R, Vielberg, M.-T, Mayer, C, Straetener, J, Thomy, D, Famulla, K, Castro, H.C, Sass, P, Groll, M, Broetz-Oesterheldt, H.
Deposit date:2019-12-30
Release date:2020-03-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Functional Characterisation of ClpP Mutations Conferring Resistance to Acyldepsipeptide Antibiotics in Firmicutes.
Chembiochem, 21, 2020
6TTZ
DownloadVisualize
BU of 6ttz by Molmil
Structure of the ClpP:ADEP4-complex from Staphylococcus aureus (open state)
Descriptor: ATP-dependent Clp protease proteolytic subunit, N-[(2S)-3-(3,5-difluorophenyl)-1-[[(3S,9S,13S,15R,19S,22S)-15,19-dimethyl-2,8,12,18,21-pentaoxo-11-oxa-1,7,17,20-tetrazatetracyclo[20.4.0.03,7.013,17]hexacosan-9-yl]amino]-1-oxopropan-2-yl]heptanamide
Authors:Malik, I.T, Pereira, R, Vielberg, M.-T, Mayer, C, Straetener, J, Thomy, D, Famulla, K, Castro, H.C, Sass, P, Groll, M, Broetz-Oesterheldt, H.
Deposit date:2019-12-30
Release date:2020-03-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Functional Characterisation of ClpP Mutations Conferring Resistance to Acyldepsipeptide Antibiotics in Firmicutes.
Chembiochem, 21, 2020
2L9G
DownloadVisualize
BU of 2l9g by Molmil
Solution structure of AS1p-Tar in 10% negatively charged bicelles
Descriptor: Methyl-accepting chemotaxis protein II
Authors:Unnerstale, S, von Heijne, G, Draheim, R.R, Maler, L.
Deposit date:2011-02-09
Release date:2011-09-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural characterization of AS1-membrane interactions from a subset of HAMP domains
Biochim.Biophys.Acta, 1808, 2011
2N9U
DownloadVisualize
BU of 2n9u by Molmil
Solution NMR structure of Erythrobacter litoralis PhyR response regulator REC domain
Descriptor: Response regulator
Authors:Correa, F, Gardner, K.H.
Deposit date:2015-12-09
Release date:2016-09-07
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Basis of Mutual Domain Inhibition in a Bacterial Response Regulator.
Cell Chem Biol, 23, 2016
3PMI
DownloadVisualize
BU of 3pmi by Molmil
PWWP Domain of Human Mutated Melanoma-Associated Antigen 1
Descriptor: DI(HYDROXYETHYL)ETHER, PWWP domain-containing protein MUM1, SULFATE ION, ...
Authors:Lam, R, Zeng, H, Loppnau, P, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Min, J, Wu, H, Structural Genomics Consortium (SGC)
Deposit date:2010-11-17
Release date:2010-12-15
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Structural and histone binding ability characterizations of human PWWP domains.
Plos One, 6, 2011
6QRJ
DownloadVisualize
BU of 6qrj by Molmil
Crystal structure of ShkA full-length in complex with AMPPNP
Descriptor: Hybrid kinase, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Dubey, B.N, Schirmer, T.
Deposit date:2019-02-19
Release date:2020-01-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Hybrid histidine kinase activation by cyclic di-GMP-mediated domain liberation.
Proc.Natl.Acad.Sci.USA, 117, 2020
2LP0
DownloadVisualize
BU of 2lp0 by Molmil
The solution structure of homeodomain-protein complex
Descriptor: Geminin, Homeobox protein Hox-C9
Authors:Liu, C, Zhou, B, Xu, Z, Zhu, G.
Deposit date:2012-01-29
Release date:2012-06-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis for homeodomain recognition by the cell-cycle regulator Geminin
Proc.Natl.Acad.Sci.USA, 2012
6PH2
DownloadVisualize
BU of 6ph2 by Molmil
Complete LOV domain from the LOV-HK sensory protein from Brucella abortus (mutant C69S, construct 15-155)
Descriptor: Blue-light-activated histidine kinase, FLAVIN MONONUCLEOTIDE
Authors:Rinaldi, J, Otero, L.H, Fernandez, I, Goldbaum, F.A, Shin, H, Yang, X, Klinke, S.
Deposit date:2019-06-25
Release date:2020-12-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Dimer Asymmetry and Light Activation Mechanism in Brucella Blue-Light Sensor Histidine Kinase.
Mbio, 12, 2021
6PH4
DownloadVisualize
BU of 6ph4 by Molmil
Full length LOV-PAS-HK construct from the LOV-HK sensory protein from Brucella abortus (light-adapted, construct 15-489)
Descriptor: Blue-light-activated histidine kinase, CHLORIDE ION, FLAVIN MONONUCLEOTIDE, ...
Authors:Rinaldi, J, Otero, L.H, Fernandez, I, Goldbaum, F.A, Shin, H, Yang, X, Klinke, S.
Deposit date:2019-06-25
Release date:2020-12-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Dimer Asymmetry and Light Activation Mechanism in Brucella Blue-Light Sensor Histidine Kinase.
Mbio, 12, 2021
6PH3
DownloadVisualize
BU of 6ph3 by Molmil
LOV-PAS construct from the LOV-HK sensory protein from Brucella abortus (dark-adapted, construct 15-273)
Descriptor: Blue-light-activated histidine kinase, FLAVIN MONONUCLEOTIDE
Authors:Rinaldi, J, Otero, L.H, Fernandez, I, Goldbaum, F.A, Shin, H, Yang, X, Klinke, S.
Deposit date:2019-06-25
Release date:2020-12-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Dimer Asymmetry and Light Activation Mechanism in Brucella Blue-Light Sensor Histidine Kinase.
Mbio, 12, 2021
6PPS
DownloadVisualize
BU of 6pps by Molmil
A blue light illuminated LOV-PAS construct from the LOV-HK sensory protein from Brucella abortus (construct 15-273)
Descriptor: Blue-light-activated histidine kinase, FLAVIN MONONUCLEOTIDE
Authors:Rinaldi, J, Fernandez, I, Shin, H, Gunawardana, S, Otero, L.H, Cerutti, M.L, Yang, X, Klinke, S, Goldbaum, F.A.
Deposit date:2019-07-08
Release date:2020-07-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Dimer Asymmetry and Light Activation Mechanism in Brucella Blue-Light Sensor Histidine Kinase.
Mbio, 12, 2021
6QRL
DownloadVisualize
BU of 6qrl by Molmil
Crystal structure of ShkA _Rec1 in complex with c-di-GMP
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Hybrid kinase, SULFATE ION
Authors:Dubey, B.N, Schirmer, T.
Deposit date:2019-02-19
Release date:2020-01-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Hybrid histidine kinase activation by cyclic di-GMP-mediated domain liberation.
Proc.Natl.Acad.Sci.USA, 117, 2020
3E6R
DownloadVisualize
BU of 3e6r by Molmil
Crystal structure of apo-ferritin from Pseudo-nitzschia multiseries
Descriptor: Ferritin, SULFATE ION
Authors:Murphy, M.E.P, Arrieta, A.L.
Deposit date:2008-08-15
Release date:2008-11-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Ferritin is used for iron storage in bloom-forming marine pennate diatoms.
Nature, 457, 2009
3PFS
DownloadVisualize
BU of 3pfs by Molmil
PWWP Domain of Human Bromodomain and PHD finger-containing protein 3
Descriptor: Bromodomain and PHD finger-containing protein 3, SULFATE ION, ZINC ION
Authors:Lam, R, Zeng, H, Kania, J, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Min, J, Wu, H, Structural Genomics Consortium (SGC)
Deposit date:2010-10-29
Release date:2010-11-10
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and histone binding ability characterizations of human PWWP domains.
Plos One, 6, 2011
5I2C
DownloadVisualize
BU of 5i2c by Molmil
Arginine-bound CASTOR1 from Homo sapiens
Descriptor: ACETATE ION, ARGININE, GATS-like protein 3
Authors:Saxton, R.A, Knockenhauer, K.E, Schwartz, T.U.
Deposit date:2016-02-08
Release date:2016-08-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Mechanism of arginine sensing by CASTOR1 upstream of mTORC1.
Nature, 536, 2016
5AAR
DownloadVisualize
BU of 5aar by Molmil
Structure of the ankyrin domain of an Arabidopsis Thaliana potassium channel
Descriptor: MAGNESIUM ION, POTASSIUM CHANNEL AKT1
Authors:Chaves-Sanjuan, A, Sanchez-Barrena, M.J, Albert, A.
Deposit date:2015-07-28
Release date:2016-08-24
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Recognition and activation of the plant AKT1 potassium channel by the kinase CIPK23.
Plant Physiol., 2020

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon