PDB: 47120 resultsInfo pagesStatus searchChemie searchBIRD

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2F38	Crystal structure of prostaglandin F synathase containing bimatoprost Descriptor: (5Z)-7-{(1R,2R,3R,5S)-3,5-DIHYDROXY-2-[(1E,3S)-3-HYDROXY-5-PHENYLPENT-1-ENYL]CYCLOPENTYL}-N-ETHYLHEPT-5-ENAMIDE, Aldo-keto reductase family 1 member C3, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Authors: Komoto, J, Yamada, T, Watanabe, K, Woodward, D.F, Takusagawa, F. Deposit date: 2005-11-18 Release date: 2006-10-31 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (2 Å) Cite: Prostaglandin F2alpha formation from prostaglandin H2 by prostaglandin F synthase (PGFS): crystal structure of PGFS containing bimatoprost. Biochemistry, 45, 2006
2FBS	Solution structure of the LL-37 core peptide bound to detergent micelles Descriptor: Antibacterial protein FALL-39, core peptide Authors: Wang, G, Li, X. Deposit date: 2005-12-10 Release date: 2006-05-23 Last modified: 2022-03-09 Method: SOLUTION NMR Cite: Solution Structures of Human LL-37 Fragments and NMR-Based Identification of a Minimal Membrane-Targeting Antimicrobial and Anticancer Region J.Am.Chem.Soc., 128, 2006
2FJT	Adenylyl cyclase class iv from Yersinia pestis Descriptor: Adenylyl cyclase class IV, SULFATE ION Authors: Gallagher, D.T, Smith, N.N, Kim, S.-K, Reddy, P.T, Robinson, H, Heroux, A. Deposit date: 2006-01-03 Release date: 2006-11-14 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (1.901 Å) Cite: Structure of the class IV adenylyl cyclase reveals a novel fold J.Mol.Biol., 362, 2006
2FIK	Structure of a microbial glycosphingolipid bound to mouse CD1d Descriptor: (2S,3R)-3-HYDROXY-2-(TETRADECANOYLAMINO)OCTADECYL ALPHA-D-GALACTOPYRANOSIDURONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Wu, D, Zajonc, D.M. Deposit date: 2005-12-29 Release date: 2006-03-21 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Design of natural killer T cell activators: structure and function of a microbial glycosphingolipid bound to mouse CD1d. Proc.Natl.Acad.Sci.Usa, 103, 2006
2FJP	Human dipeptidyl peptidase IV/CD26 in complex with an inhibitor Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 6-(4-{(1S,2S)-2-AMINO-1-[(DIMETHYLAMINO)CARBONYL]-3-[(3S)-3-FLUOROPYRROLIDIN-1-YL]-3-OXOPROPYL}PHENYL)-1H-[1,2,4]TRIAZOLO[1,5-A]PYRIDIN-4-IUM, ... Authors: Scapin, G, Patel, S.B, Becker, J.W. Deposit date: 2006-01-03 Release date: 2006-07-04 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.4 Å) Cite: (2S,3S)-3-Amino-4-(3,3-difluoropyrrolidin-1-yl)-N,N-dimethyl-4-oxo-2-(4-[1,2,4]triazolo[1,5-a]- pyridin-6-ylphenyl)butanamide: a selective alpha-amino amide dipeptidyl peptidase IV inhibitor for the treatment of type 2 diabetes. J.Med.Chem., 49, 2006
2FKW	Structure of LH2 from Rps. acidophila crystallized in lipidic mesophases Descriptor: BACTERIOCHLOROPHYLL A, LAURYL DIMETHYLAMINE-N-OXIDE, Light-harvesting protein B-800/850, ... Authors: Papiz, M.Z, Cherezov, V, Clogston, J, Caffrey, M. Deposit date: 2006-01-05 Release date: 2006-03-28 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.45 Å) Cite: Room to Move: Crystallizing Membrane Proteins in Swollen Lipidic Mesophases J.Mol.Biol., 357, 2006
2FL8	Fitting of the gp10 trimer structure into the cryoEM map of the bacteriophage T4 baseplate in the hexagonal conformation. Descriptor: Baseplate structural protein Gp10 Authors: Leiman, P.G, Shneider, M.M, Mesyanzhinov, V.V, Rossmann, M.G. Deposit date: 2006-01-05 Release date: 2006-04-04 Last modified: 2024-02-14 Method: ELECTRON MICROSCOPY (12 Å) Cite: Evolution of bacteriophage tails: structure of t4 gene product 10 J.Mol.Biol., 358, 2006
2ES2	Crystal Structure Analysis of the Bacillus Subtilis Cold Shock Protein Bs-CspB in Complex with Hexathymidine Descriptor: 5'-D(*TP*TP*TP*TP*TP*T)-3', CALCIUM ION, Cold shock protein cspB Authors: Max, K.E.A, Bienert, M, Heinemann, U. Deposit date: 2005-10-25 Release date: 2006-09-05 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (1.78 Å) Cite: T-rich DNA single strands bind to a preformed site on the bacterial cold shock protein Bs-CspB. J.Mol.Biol., 360, 2006
2F3D	Mechanism of displacement of a catalytically essential loop from the active site of fructose-1,6-bisphosphatase Descriptor: 6-O-phosphono-beta-D-fructofuranose, ADENOSINE MONOPHOSPHATE, Fructose-1,6-bisphosphatase 1, ... Authors: Iancu, C.V, Mukund, S, Choe, J.-Y, Fromm, H.J, Honzatko, R.B. Deposit date: 2005-11-21 Release date: 2006-04-25 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.83 Å) Cite: Mechanism of displacement of a catalytically essential loop from the active site of mammalian fructose-1,6-bisphosphatase. Biochemistry, 52, 2013
2F3J	The solution structure of the REF2-I mRNA export factor (residues 1-155). Descriptor: RNA and export factor binding protein 2 Authors: Golovanov, A.P, Hautbergue, G.M, Wilson, S.A, Lian, L.Y. Deposit date: 2005-11-21 Release date: 2006-10-31 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: The solution structure of REF2-I reveals interdomain interactions and regions involved in binding mRNA export factors and RNA. Rna, 12, 2006
2F5T	Crystal Structure of the sugar binding domain of the archaeal transcriptional regulator TrmB Descriptor: IMIDAZOLE, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, archaeal transcriptional regulator TrmB Authors: Krug, M, Lee, S.J, Diederichs, K, Boos, W, Welte, W. Deposit date: 2005-11-27 Release date: 2006-02-21 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.45 Å) Cite: Crystal Structure of the Sugar Binding Domain of the Archaeal Transcriptional Regulator TrmB J.Biol.Chem., 281, 2006
2F7B	CatM effector binding domain Descriptor: CHLORIDE ION, HTH-type transcriptional regulator catM, SULFATE ION Authors: Clark, T, Haddad, S, Ezezika, O, Neidle, E, Momany, C. Deposit date: 2005-11-30 Release date: 2006-10-31 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Distinct Effector-binding Sites Enable Synergistic Transcriptional Activation by BenM, a LysR-type Regulator. J.Mol.Biol., 367, 2007
2F81	HIV-1 Protease mutant L90M complexed with inhibitor TMC114 Descriptor: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, CHLORIDE ION, GLYCEROL, ... Authors: Kovalevsky, A.Y, Weber, I.T. Deposit date: 2005-12-01 Release date: 2006-03-07 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.25 Å) Cite: Effectiveness of Nonpeptide Clinical Inhibitor TMC-114 on HIV-1 Protease with Highly Drug Resistant Mutations D30N, I50V, and L90M. J.Med.Chem., 49, 2006
2FC2	NO-HEME complex in a bacterial nitric oxide synthase. An Fe(III)-NO may cause nitrosation. Descriptor: 7,8-DIHYDROBIOPTERIN, N-OMEGA-HYDROXY-L-ARGININE, NITRIC OXIDE, ... Authors: Pant, K, Crane, B.R. Deposit date: 2005-12-10 Release date: 2006-08-22 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Nitrosyl-heme structures of Bacillus subtilis nitric oxide synthase have implications for understanding substrate oxidation. Biochemistry, 45, 2006
2FDB	Crystal Structure of Fibroblast growth factor (FGF)8b in complex with FGF Receptor (FGFR) 2c Descriptor: Fibroblast growth factor receptor 2, fibroblast growth factor 8 isoform B Authors: Mohammadi, M, Olsen, S.K. Deposit date: 2005-12-13 Release date: 2006-02-07 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.28 Å) Cite: Structural basis by which alternative splicing modulates the organizer activity of FGF8 in the brain Genes Dev., 20, 2006
2FFL	Crystal Structure of Dicer from Giardia intestinalis Descriptor: Dicer, MANGANESE (II) ION Authors: Doudna, J.A, MacRae, I.J, Adams, P.D. Deposit date: 2005-12-19 Release date: 2006-01-24 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (3.33 Å) Cite: Structural Basis of Double-Stranded RNA Processing by Dicer Science, 311, 2006
2FD4	Crystal Structure of AvrPtoB (436-553) Descriptor: avirulence protein AvrptoB Authors: Janjusevic, R, Stebbins, C.E. Deposit date: 2005-12-13 Release date: 2005-12-27 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.8 Å) Cite: A bacterial inhibitor of host programmed cell death defenses is an E3 ubiquitin ligase. Science, 311, 2006
8PAF	Crystal structure of human Histidine Triad Nucleotide-Binding Protein 1 in complex with 5'-O-[N-(3-Indolepropionic acid)sulfamoyl] 2-aminoethenoadenosine Descriptor: 5'-O-[N-(3-Indolepropionic acid)sulfamoyl] 2-aminoethenoadenosine, Histidine triad nucleotide-binding protein 1 Authors: Dolot, R.M, Dillenburg, M, Wagner, C.R. Deposit date: 2023-06-07 Release date: 2023-06-14 Last modified: 2024-06-19 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Novel inhibitors for hHINT1 protein To Be Published
7GTZ	PanDDA analysis group deposition of ground-state model of PTP1B, using pre-clustering, cluster5 Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Tyrosine-protein phosphatase non-receptor type 1 Authors: Mehlman, T, Ginn, H.M, Keedy, D.A. Deposit date: 2024-01-05 Release date: 2024-01-31 Method: X-RAY DIFFRACTION (1.6 Å) Cite: PanDDA analysis group deposition of ground-state model To Be Published
3GSH	Three-dimensional structure of a post translational modified barley LTP1 Descriptor: (12E)-10-oxooctadec-12-enoic acid, Non-specific lipid-transfer protein 1, SODIUM ION, ... Authors: Lascombe, M.B, Prange, T, Bakan, B, Marion, D. Deposit date: 2009-03-27 Release date: 2009-12-15 Last modified: 2017-11-01 Method: X-RAY DIFFRACTION (1.8 Å) Cite: The crystal structure of oxylipin-conjugated barley LTP1 highlights the unique plasticity of the hydrophobic cavity of these plant lipid-binding proteins. Biochem.Biophys.Res.Commun., 390, 2009
2L33	Solution NMR Structure of DRBM 2 domain of Interleukin enhancer-binding factor 3 from Homo sapiens, Northeast Structural Genomics Consortium Target HR4527E Descriptor: Interleukin enhancer-binding factor 3 Authors: Liu, G, Janjua, H, Xiao, R, Acton, T.B, Ciccosanti, A, Shastry, R.B, Everett, J, Montelione, G.T, Northeast Structural Genomics Consortium, Northeast Structural Genomics Consortium (NESG) Deposit date: 2010-09-03 Release date: 2010-09-22 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Northeast Structural Genomics Consortium Target HR4527E To be Published
7GTW	PanDDA analysis group deposition of ground-state model of PTP1B, using pre-clustering, cluster1 Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Tyrosine-protein phosphatase non-receptor type 1 Authors: Mehlman, T, Ginn, H.M, Keedy, D.A. Deposit date: 2024-01-05 Release date: 2024-01-31 Method: X-RAY DIFFRACTION (1.51 Å) Cite: PanDDA analysis group deposition of ground-state model To Be Published
7RXP	Fab1512 in complex with the C-terminal alpha-TSR domain of P. falciparum Descriptor: Circumsporozoite protein, Fab1512 heavy chain, Fab1512 light chain Authors: Pholcharee, T, Oyen, D, Wilson, I.A. Deposit date: 2021-08-23 Release date: 2022-03-16 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (1.761 Å) Cite: A novel CSP C-terminal epitope targeted by an antibody with protective activity against Plasmodium falciparum. Plos Pathog., 18, 2022
7DG2	Nse1-Nse3-Nse4 complex Descriptor: ACETATE ION, GLYCEROL, MAGE domain-containing protein, ... Authors: Cho, Y, Jo, A. Deposit date: 2020-11-10 Release date: 2021-05-26 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Structure Basis for Shaping the Nse4 Protein by the Nse1 and Nse3 Dimer within the Smc5/6 Complex. J.Mol.Biol., 433, 2021
7GU6	PanDDA analysis group deposition of ground-state model of PTP1B, using pre-clustering, cluster14 Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Tyrosine-protein phosphatase non-receptor type 1 Authors: Mehlman, T, Ginn, H.M, Keedy, D.A. Deposit date: 2024-01-05 Release date: 2024-01-31 Method: X-RAY DIFFRACTION (1.56 Å) Cite: PanDDA analysis group deposition of ground-state model To Be Published

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