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2JR0
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BU of 2jr0 by Molmil
Solution structure of NusB from Aquifex Aeolicus
Descriptor: N utilization substance protein B homolog
Authors:Das, R, Loss, S, Li, J, Tarasov, S, Wingfield, P, Waugh, D.S, Byrd, R.A, Altieri, A.S.
Deposit date:2007-06-18
Release date:2008-02-19
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Structural biophysics of the NusB:NusE antitermination complex.
J.Mol.Biol., 376, 2008
2PO2
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BU of 2po2 by Molmil
Crystal structure of the P. abyssi exosome RNase PH ring complexed with CDP
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CYTIDINE-5'-DIPHOSPHATE, Probable exosome complex exonuclease 1, ...
Authors:Navarro, M.V.A.S, Guimaraes, B.G.
Deposit date:2007-04-25
Release date:2008-03-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Insights into the mechanism of progressive RNA degradation by the archaeal exosome.
J.Biol.Chem., 283, 2008
8DHA
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BU of 8dha by Molmil
Leptin-bound leptin receptor complex- focused interaction
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Leptin, Leptin receptor
Authors:Saxton, R.A, Caveney, N.A, Garcia, K.C.
Deposit date:2022-06-25
Release date:2023-04-19
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural insights into the mechanism of leptin receptor activation.
Nat Commun, 14, 2023
2POW
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BU of 2pow by Molmil
The crystal structure of the human carbonic anhydrase II in complex with 4-amino-6-trifluoromethyl-benzene-1,3-disulfonamide
Descriptor: 4-AMINO-6-(TRIFLUOROMETHYL)BENZENE-1,3-DISULFONAMIDE, Carbonic anhydrase 2, ZINC ION
Authors:Alterio, V, De Simone, G.
Deposit date:2007-04-27
Release date:2007-07-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Carbonic anhydrase inhibitors: Inhibition of human, bacterial, and archaeal isozymes with benzene-1,3-disulfonamides-Solution and crystallographic studies.
Bioorg.Med.Chem.Lett., 17, 2007
8CWT
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BU of 8cwt by Molmil
Complex structure of WhiB3 and the SigmaAr4-RNAP Beta flap tip chimera in space group P43212
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, IRON/SULFUR CLUSTER, NICKEL (II) ION, ...
Authors:Wan, T, Zhang, L.
Deposit date:2022-05-19
Release date:2023-05-17
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural basis of DNA binding by the WhiB-like transcription factor WhiB3 in Mycobacterium tuberculosis.
J.Biol.Chem., 299, 2023
7L78
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BU of 7l78 by Molmil
H235C variant of Yeast Ferrochelatase
Descriptor: CHOLIC ACID, Ferrochelatase, mitochondrial
Authors:Lanzilotta, W.N, Medlock, A.E.
Deposit date:2020-12-27
Release date:2021-11-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Mitochondrial contact site and cristae organizing system (MICOS) machinery supports heme biosynthesis by enabling optimal performance of ferrochelatase.
Redox Biol, 46, 2021
2PLF
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BU of 2plf by Molmil
The structure of aIF2gamma subunit from the archaeon Sulfolobus solfataricus in the nucleotide-free form.
Descriptor: Translation initiation factor 2 gamma subunit
Authors:Nikonov, O.S, Stolboushkina, E.A, Nikulin, A.D, Hasenohrl, D, Blaesi, U, Manstein, D.J, Fedorov, R.V, Garber, M.B, Nikonov, S.V.
Deposit date:2007-04-19
Release date:2007-11-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:New Insights into the Interactions of the Translation Initiation Factor 2 from Archaea with Guanine Nucleotides and Initiator tRNA.
J.Mol.Biol., 373, 2007
6KVD
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BU of 6kvd by Molmil
Crystal structure of human nucleosome containing H2A.J
Descriptor: CHLORIDE ION, DNA (146-MER), Histone H2A.J, ...
Authors:Tanaka, H, Koyama, M, Sato, S, Kujirai, T, Kurumizaka, H.
Deposit date:2019-09-04
Release date:2019-12-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Biochemical and structural analyses of the nucleosome containing human histone H2A.J.
J.Biochem., 167, 2020
2PNZ
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BU of 2pnz by Molmil
Crystal structure of the P. abyssi exosome RNase PH ring complexed with UDP and GMP
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, GUANOSINE-5'-MONOPHOSPHATE, Probable exosome complex exonuclease 1, ...
Authors:Navarro, M.V.A.S, Guimaraes, B.G.
Deposit date:2007-04-25
Release date:2008-03-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Insights into the mechanism of progressive RNA degradation by the archaeal exosome.
J.Biol.Chem., 283, 2008
4EJY
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BU of 4ejy by Molmil
Structure of MBOgg1 in complex with high affinity DNA ligand
Descriptor: 3-Methyladenine DNA glycosylase, DNA (5'-D(*AP*GP*CP*GP*TP*CP*CP*AP*(3DR)P*GP*TP*CP*TP*AP*CP*C)-3'), DNA (5'-D(*T*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*C)-3'), ...
Authors:Jiang, T, Yu, H.J, Bi, L.J, Zhang, X.E, Yang, M.Z.
Deposit date:2012-04-08
Release date:2013-03-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of MBOgg1 in complex with two abasic DNA ligands
J.Struct.Biol., 181, 2013
6L74
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BU of 6l74 by Molmil
Thermus thermophilus initial transcription complex comprising sigma A and 5'-triphosphate RNA of 2 nt
Descriptor: DNA (5'-D(*GP*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*CP*GP*AP*G)-3'), DNA (5'-D(*TP*AP*TP*AP*AP*TP*GP*GP*GP*AP*GP*CP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*GP*C)-3'), DNA-directed RNA polymerase subunit alpha, ...
Authors:Zhang, Y, Li, L, Ebright, R.H.
Deposit date:2019-10-31
Release date:2020-03-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.12 Å)
Cite:RNA extension drives a stepwise displacement of an initiation-factor structural module in initial transcription.
Proc.Natl.Acad.Sci.USA, 117, 2020
2Q38
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BU of 2q38 by Molmil
Carbonic Anhydrase II in complex with Saccharin at 1.95 Angstrom
Descriptor: 1,2-BENZISOTHIAZOL-3(2H)-ONE 1,1-DIOXIDE, BENZOIC ACID, Carbonic anhydrase 2, ...
Authors:Schulze Wischeler, J, Heine, A, Klebe, G.
Deposit date:2007-05-30
Release date:2007-10-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Saccharin Inhibits Carbonic Anhydrases: Possible Explanation for its Unpleasant Metallic Aftertaste.
Angew.Chem.Int.Ed.Engl., 46, 2007
8J8T
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BU of 8j8t by Molmil
Crystal structure of calcium-saturated SRCR domain 11 of DMBT1
Descriptor: CALCIUM ION, Deleted in malignant brain tumors 1 protein
Authors:Zhang, C, Lu, P, Nagata, K.
Deposit date:2023-05-02
Release date:2023-12-13
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Crystal structure of Calcium-saturated SRCR domain 11 of SALSA
To Be Published
6LH7
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BU of 6lh7 by Molmil
Crystal Structure of Vibrio cholerae Methionine Aminopeptidase with Partially Occupied Metals
Descriptor: GLYCEROL, Methionine aminopeptidase, NICKEL (II) ION, ...
Authors:Pillalamarri, V, Addlagatta, A.
Deposit date:2019-12-06
Release date:2020-12-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.473 Å)
Cite:Methionine aminopeptidases with short sequence inserts within the catalytic domain are differentially inhibited: Structural and biochemical studies of three proteins from Vibrio spp.
Eur.J.Med.Chem., 209, 2020
6L4A
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BU of 6l4a by Molmil
H3-H3-H3 tri-nucleosome with the 22 base-pair linker DNA
Descriptor: DNA (485-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
Authors:Takizawa, Y, Ho, C.-H, Tachiwana, H, Matsunami, H, Ohi, M, Wolf, M, Kurumizaka, H.
Deposit date:2019-10-16
Release date:2019-12-04
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (12.3 Å)
Cite:Cryo-EM Structures of Centromeric Tri-nucleosomes Containing a Central CENP-A Nucleosome.
Structure, 28, 2020
7QEK
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BU of 7qek by Molmil
Structure of the ligand binding domain of the antibiotic biosynthesis regulator AdmX from the rhizobacterium Serratia plymuthica A153 bound to the auxin indole-3-piruvic acid (IPA).
Descriptor: 3-(1H-INDOL-3-YL)-2-OXOPROPANOIC ACID, MAGNESIUM ION, regulator AdmX
Authors:Gavira, J.A, Rico-Jimenez, M, Castellvi, A, Krell, T, Matilla, M.A.
Deposit date:2021-12-03
Release date:2022-12-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Emergence of an Auxin Sensing Domain in Plant-Associated Bacteria.
Mbio, 14, 2023
7QEJ
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BU of 7qej by Molmil
Structure of the ligand binding domain of the antibiotic biosynthesis regulator AdmX from the rhizobacterium Serratia plymuthica A153 bound to the auxin indole-3-acetic acid (IAA).
Descriptor: 1H-INDOL-3-YLACETIC ACID, MAGNESIUM ION, TRANSCRIPTIONAL REGULATOR AdmX
Authors:Gavira, J.A, Rico-Jimenez, M, Castellvi, A, Krell, T, Matilla, M.A.
Deposit date:2021-12-03
Release date:2022-12-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Emergence of an Auxin Sensing Domain in Plant-Associated Bacteria.
Mbio, 14, 2023
7YI9
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BU of 7yi9 by Molmil
Cryo-EM structure of SAM-bound MTA1-MTA9-p1-p2 complex
Descriptor: MT-a70 family protein, MTA9, P1, ...
Authors:Yan, J.J, Guan, Z.Y, Liu, F.Q, Yan, X.H, Hou, M.J, Yin, P.
Deposit date:2022-07-15
Release date:2023-01-18
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structural insights into DNA N 6 -adenine methylation by the MTA1 complex.
Cell Discov, 9, 2023
7QGW
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BU of 7qgw by Molmil
Sulfonated Calpeptin is a promising drug candidate against SARS-CoV-2 infections
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Calpeptin, ...
Authors:Loboda, J, Karnicar, K, Lindic, N, Usenik, A, Lieske, J, Meents, A, Guenther, S, Reinke, P.Y.A, Falke, S, Ewert, W, Turk, D.
Deposit date:2021-12-10
Release date:2022-12-21
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Calpeptin is a potent cathepsin inhibitor and drug candidate for SARS-CoV-2 infections.
Commun Biol, 6, 2023
2PUX
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BU of 2pux by Molmil
Crystal structure of murine thrombin in complex with the extracellular fragment of murine PAR3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Proteinase-activated receptor 3, Thrombin heavy chain, ...
Authors:Bah, A, Chen, Z, Bush-Pelc, L.A, Mathews, F.S, Di Cera, E.
Deposit date:2007-05-09
Release date:2007-07-10
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of murine thrombin in complex with the extracellular fragments of murine protease-activated receptors PAR3 and PAR4.
Proc.Natl.Acad.Sci.Usa, 104, 2007
8ITR
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BU of 8itr by Molmil
Crystal structure of lysophosphatidylcholine in complex with human serum albumin
Descriptor: Albumin, [1-MYRISTOYL-GLYCEROL-3-YL]PHOSPHONYLCHOLINE
Authors:Wang, Y, Jiang, L.G, Huang, M.D.
Deposit date:2023-03-22
Release date:2024-01-31
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Crystal structures of human serum albumin in complex with lysophosphatidylcholine.
Biophys.J., 122, 2023
8ITT
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BU of 8itt by Molmil
Crystal structure of lysophosphatidylcholine in complex with human serum albumin and myristate
Descriptor: Albumin, MYRISTIC ACID, [1-MYRISTOYL-GLYCEROL-3-YL]PHOSPHONYLCHOLINE
Authors:Wang, Y, Jiang, L.G, Huang, M.D.
Deposit date:2023-03-22
Release date:2024-01-31
Method:X-RAY DIFFRACTION (3.03 Å)
Cite:Crystal structures of human serum albumin in complex with lysophosphatidylcholine.
Biophys.J., 122, 2023
2Q2M
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BU of 2q2m by Molmil
Beta-lactoglobulin (native)
Descriptor: Beta-lactoglobulin
Authors:Vijayalakshmi, L, Krishna, R, Sankaranarayanan, R, Vijayan, M.
Deposit date:2007-05-29
Release date:2008-02-26
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:An asymmetric dimer of beta-lactoglobulin in a low humidity crystal form-Structural changes that accompany partial dehydration and protein action.
Proteins, 71, 2007
6LFG
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BU of 6lfg by Molmil
Cryo-EM structure of the Drosophila CTP synthase product-bound filament
Descriptor: CTP synthase
Authors:Ji-long, L, Xian, Z, Chen-Jun, G.
Deposit date:2019-12-02
Release date:2020-03-18
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (9.58 Å)
Cite:Drosophila CTP synthase can form distinct substrate- and product-bound filaments.
J Genet Genomics, 46, 2019
2POV
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BU of 2pov by Molmil
The crystal structure of the human carbonic anhydrase II in complex with 4-amino-6-chloro-benzene-1,3-disulfonamide
Descriptor: 4-AMINO-6-CHLOROBENZENE-1,3-DISULFONAMIDE, Carbonic anhydrase 2, ZINC ION
Authors:Alterio, V, De Simone, G.
Deposit date:2007-04-27
Release date:2007-07-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Carbonic anhydrase inhibitors: Inhibition of human, bacterial, and archaeal isozymes with benzene-1,3-disulfonamides-Solution and crystallographic studies.
Bioorg.Med.Chem.Lett., 17, 2007

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