Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2GB9
DownloadVisualize
BU of 2gb9 by Molmil
d(CGTACG)2 crosslinked bis-acridine complex
Descriptor: 5'-D(*CP*GP*TP*AP*CP*G)-3', 9,9'-(HEXANE-1,6-DIYLDIIMINO)BIS{N-[2-(DIMETHYLAMINO)ETHYL]ACRIDINE-4-CARBOXAMIDE}, STRONTIUM ION
Authors:Hopcroft, N.H, Brogden, A.L, Searcey, M, Cardin, C.J.
Deposit date:2006-03-10
Release date:2006-04-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:X-ray crystallographic study of DNA duplex cross-linking: simultaneous binding to two d(CGTACG)2 molecules by a bis(9-aminoacridine-4-carboxamide) derivative.
Nucleic Acids Res., 34, 2006
4RC5
DownloadVisualize
BU of 4rc5 by Molmil
Crystal structure of cyanobacterial aldehyde-deformylating oxygenase
Descriptor: Aldehyde decarbonylase, FE (II) ION, HEXADECAN-1-OL
Authors:Jia, C.J, Li, M, Chang, W.R.
Deposit date:2014-09-14
Release date:2014-12-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insights into the catalytic mechanism of aldehyde-deformylating oxygenases.
Protein Cell, 6, 2015
2QO9
DownloadVisualize
BU of 2qo9 by Molmil
Human EphA3 kinase and juxtamembrane region, phosphorylated, AMP-PNP bound
Descriptor: Ephrin receptor, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Davis, T, Walker, J.R, Newman, E.M, Mackenzie, F, Butler-Cole, C, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
Deposit date:2007-07-20
Release date:2007-08-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Autoregulation by the Juxtamembrane Region of the Human Ephrin Receptor Tyrosine Kinase A3 (EphA3).
Structure, 16, 2008
1I9O
DownloadVisualize
BU of 1i9o by Molmil
CARBONIC ANHYDRASE II (F131V) COMPLEXED WITH 4-(AMINOSULFONYL)-N-[(2,3,4-TRIFLUOROPHENYL)METHYL]-BENZAMIDE
Descriptor: 4-(AMINOSULFONYL)-N-[(2,3,4-TRIFLUOROPHENYL)METHYL]-BENZAMIDE, CARBONIC ANHYDRASE II, MERCURY (II) ION, ...
Authors:Kim, C.-Y, Chandra, P.P, Jain, A, Christianson, D.W.
Deposit date:2001-03-20
Release date:2001-03-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Fluoroaromatic-fluoroaromatic interactions between inhibitors bound in the crystal lattice of human carbonic anhydrase II.
J.Am.Chem.Soc., 123, 2001
4QYF
DownloadVisualize
BU of 4qyf by Molmil
CHK1 kinase domain in complex with aminopyrazine compound 13
Descriptor: 4-[3-amino-6-(3-hydroxyphenyl)pyrazin-2-yl]benzoic acid, Serine/threonine-protein kinase Chk1
Authors:Appleton, B, Wu, P.
Deposit date:2014-07-24
Release date:2014-12-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Discovery of the 1,7-diazacarbazole class of inhibitors of checkpoint kinase 1.
Bioorg.Med.Chem.Lett., 24, 2014
4F2F
DownloadVisualize
BU of 4f2f by Molmil
Crystal structure of the metal binding domain (MBD) of the Streptococcus pneumoniae D39 Cu(I) exporting P-type ATPase CopA with Cu(I)
Descriptor: CHLORIDE ION, COPPER (I) ION, Cation-transporting ATPase, ...
Authors:Fu, Y, Dann III, C.E, Giedroc, D.P.
Deposit date:2012-05-07
Release date:2013-01-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A new structural paradigm in copper resistance in Streptococcus pneumoniae.
Nat.Chem.Biol., 9, 2013
2ESW
DownloadVisualize
BU of 2esw by Molmil
Atomic structure of the N-terminal SH3 domain of mouse beta PIX,p21-activated kinase (PAK)-interacting exchange factor
Descriptor: CHLORIDE ION, MERCURY (II) ION, Rho guanine nucleotide exchange factor 7
Authors:Rao, Z.
Deposit date:2005-10-27
Release date:2006-04-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Crystal structure of the N-terminal SH3 domain of mouse betaPIX, p21-activated kinase-interacting exchange factor
Biochem.Biophys.Res.Commun., 339, 2006
2QOQ
DownloadVisualize
BU of 2qoq by Molmil
Human EphA3 kinase and juxtamembrane region, base, AMP-PNP bound structure
Descriptor: Ephrin receptor, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Davis, T, Walker, J.R, Newman, E.M, Mackenzie, F, Butler-Cole, C, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S, Loppnau, P, Allali-Hassani, A, Structural Genomics Consortium (SGC)
Deposit date:2007-07-20
Release date:2007-10-02
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Autoregulation by the Juxtamembrane Region of the Human Ephrin Receptor Tyrosine Kinase A3 (EphA3).
Structure, 16, 2008
2QOB
DownloadVisualize
BU of 2qob by Molmil
Human EphA3 kinase domain, base structure
Descriptor: BETA-MERCAPTOETHANOL, Ephrin receptor
Authors:Davis, T, Walker, J.R, Newman, E.M, Mackenzie, F, Butler-Cole, C, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
Deposit date:2007-07-20
Release date:2007-08-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Autoregulation by the Juxtamembrane Region of the Human Ephrin Receptor Tyrosine Kinase A3 (EphA3).
Structure, 16, 2008
4OGS
DownloadVisualize
BU of 4ogs by Molmil
Crystal structure of GFP S205A/T203V at 2.2 A resolution
Descriptor: CHLORIDE ION, Green fluorescent protein
Authors:Remington, S.J, Saif, M.
Deposit date:2014-01-16
Release date:2014-05-14
Last modified:2014-06-18
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Insight into the structure and the mechanism of the slow proton transfer in the GFP double mutant T203V/S205A.
Phys Chem Chem Phys, 16, 2014
1EP9
DownloadVisualize
BU of 1ep9 by Molmil
HUMAN ORNITHINE TRANSCARBAMYLASE: CRYSTALLOGRAPHIC INSIGHTS INTO SUBSTRATE RECOGNITION AND CONFORMATIONAL CHANGE
Descriptor: ORNITHINE TRANSCARBAMYLASE, PHOSPHORIC ACID MONO(FORMAMIDE)ESTER
Authors:Shi, D, Morizono, H, Yu, X, Allewell, N.M, Tuchman, M.
Deposit date:2000-03-28
Release date:2001-04-04
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Human ornithine transcarbamylase: crystallographic insights into substrate recognition and conformational changes.
Biochem.J., 354, 2001
2BBA
DownloadVisualize
BU of 2bba by Molmil
Crystal Structure and Thermodynamic Characterization of the EphB4 Receptor in Complex with an ephrin-B2 Antagonist Peptide Reveals the Determinants for Receptor Specificity.
Descriptor: Agonist peptide, Ephrin type-B receptor 4, SULFATE ION
Authors:Chrencik, J.E, Kuhn, P, Accelerated Technologies Center for Gene to 3D Structure (ATCG3D)
Deposit date:2005-10-17
Release date:2006-07-18
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure and thermodynamic characterization of the EphB4/Ephrin-B2 antagonist peptide complex reveals the determinants for receptor specificity.
Structure, 14, 2006
2QF3
DownloadVisualize
BU of 2qf3 by Molmil
Structure of the delta PDZ truncation of the DegS protease
Descriptor: PHOSPHATE ION, Protease degS
Authors:Sohn, J, Grant, R.A, Sauer, R.T.
Deposit date:2007-06-26
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Allosteric activation of DegS, a stress sensor PDZ protease.
Cell(Cambridge,Mass.), 131, 2007
1I9P
DownloadVisualize
BU of 1i9p by Molmil
CARBONIC ANHYDRASE II (F131V) COMPLEXED WITH 4-(AMINOSULFONYL)-N-[(2,4,6-TRIFLUOROPHENYL)METHYL]-BENZAMIDE
Descriptor: 4-(AMINOSULFONYL)-N-[(2,4,6-TRIFLUOROPHENYL)METHYL]-BENZAMIDE, CARBONIC ANHYDRASE II, MERCURY (II) ION, ...
Authors:Kim, C.-Y, Chandra, P.P, Jain, A, Christianson, D.W.
Deposit date:2001-03-20
Release date:2001-03-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Fluoroaromatic-fluoroaromatic interactions between inhibitors bound in the crystal lattice of human carbonic anhydrase II.
J.Am.Chem.Soc., 123, 2001
1I9Q
DownloadVisualize
BU of 1i9q by Molmil
CARBONIC ANHYDRASE II (F131V) COMPLEXED WITH 4-(AMINOSULFONYL)-N-[(3,4,5-TRIFLUOROPHENYL)METHYL]-BENZAMIDE
Descriptor: 4-(AMINOSULFONYL)-N-[(3,4,5-TRIFLUOROPHENYL)METHYL]-BENZAMIDE, CARBONIC ANHYDRASE II, MERCURY (II) ION, ...
Authors:Kim, C.-Y, Chandra, P.P, Jain, A, Christianson, D.W.
Deposit date:2001-03-20
Release date:2001-03-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Fluoroaromatic-fluoroaromatic interactions between inhibitors bound in the crystal lattice of human carbonic anhydrase II.
J.Am.Chem.Soc., 123, 2001
1I9L
DownloadVisualize
BU of 1i9l by Molmil
CARBONIC ANHYDRASE II (F131V) COMPLEXED WITH 4-(AMINOSULFONYL)-N-[(4-FLUOROPHENYL)METHYL]-BENZAMIDE
Descriptor: 4-(AMINOSULFONYL)-N-[(4-FLUOROPHENYL)METHYL]-BENZAMIDE, CARBONIC ANHYDRASE II, MERCURY (II) ION, ...
Authors:Kim, C.-Y, Chandra, P.P, Jain, A, Christianson, D.W.
Deposit date:2001-03-20
Release date:2001-03-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Fluoroaromatic-fluoroaromatic interactions between inhibitors bound in the crystal lattice of human carbonic anhydrase II.
J.Am.Chem.Soc., 123, 2001
1HL7
DownloadVisualize
BU of 1hl7 by Molmil
Gamma lactamase from an Aureobacterium species in complex with 3a,4,7,7a-tetrahydro-benzo [1,3] dioxol-2-one
Descriptor: 3A,4,7,7A-TETRAHYDRO-BENZO [1,3] DIOXOL-2-ONE, GAMMA LACTAMASE
Authors:Line, K, Isupov, M.N, Littlechild, J.A.
Deposit date:2003-03-14
Release date:2004-03-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:The Crystal Structure of a (-)Gamma-Lactamase from an Aureobacterium Species Reveals a Tetrahedral Intermediate in the Active Site
J.Mol.Biol., 338, 2004
2QO7
DownloadVisualize
BU of 2qo7 by Molmil
Human EphA3 kinase and juxtamembrane region, dephosphorylated, AMP-PNP bound
Descriptor: BETA-MERCAPTOETHANOL, Ephrin receptor, GLYCEROL, ...
Authors:Davis, T, Walker, J.R, Newman, E.M, Mackenzie, F, Butler-Cole, C, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
Deposit date:2007-07-20
Release date:2007-08-28
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.605 Å)
Cite:Autoregulation by the Juxtamembrane Region of the Human Ephrin Receptor Tyrosine Kinase A3 (EphA3).
Structure, 16, 2008
1Q0P
DownloadVisualize
BU of 1q0p by Molmil
A domain of Factor B
Descriptor: Complement factor B, MANGANESE (II) ION
Authors:Bhattacharya, A.A, Liddington, R.C.
Deposit date:2003-07-17
Release date:2004-03-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of the A Domain from Complement Factor B Reveals an Integrin-like Open Conformation.
STRUCTURE, 12, 2004
1EZ8
DownloadVisualize
BU of 1ez8 by Molmil
STRUCTURE OF S. NUCLEASE STABILIZING MUTANT T33V
Descriptor: STAPHYLOCOCCAL NUCLEASE
Authors:Chen, J, Lu, Z, Sakon, J, Stites, W.E.
Deposit date:2000-05-10
Release date:2000-10-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Increasing the thermostability of staphylococcal nuclease: implications for the origin of protein thermostability.
J.Mol.Biol., 303, 2000
1EZ6
DownloadVisualize
BU of 1ez6 by Molmil
STRUCTURE OF S. NUCLEASE STABILIZING SEXTUPLE MUTANT T33V/T41I/S59A/P117G/H124L/S128A
Descriptor: STAPHYLOCOCCAL NUCLEASE
Authors:Chen, J, Lu, Z, Sakon, J, Stites, W.E.
Deposit date:2000-05-10
Release date:2000-10-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Increasing the thermostability of staphylococcal nuclease: implications for the origin of protein thermostability.
J.Mol.Biol., 303, 2000
1ZPI
DownloadVisualize
BU of 1zpi by Molmil
Crystal structure analysis of the minor groove binding quinolinium quaternary salt SN 8224 complexed with CGCGAATTCGCG
Descriptor: 5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3', 8-METHOXY-1-METHYL-4-(4-(4-(1-METHYLPYRIDINIUM-4-YLAMINO)PHENYLCARBAMOYL)PHENYLAMINO)QUINOLINIUM, MAGNESIUM ION
Authors:Adams, A, Leong, C, Denny, W.A, Guss, J.M.
Deposit date:2005-05-16
Release date:2005-10-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structures of two minor-groove-binding quinolinium quaternary salts complexed with d(CGCGAATTCGCG)(2) at 1.6 and 1.8 Angstrom resolution.
Acta Crystallogr.,Sect.D, 61, 2005
1RJQ
DownloadVisualize
BU of 1rjq by Molmil
The crystal structure of the D-aminoacylase mutant D366A
Descriptor: ACETATE ION, D-aminoacylase, ZINC ION
Authors:Lai, W.L, Chou, L.Y, Ting, C.Y, Tsai, Y.C, Liaw, S.H.
Deposit date:2003-11-20
Release date:2004-04-20
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The functional role of the binuclear metal center in D-aminoacylase: one-metal activation and second-metal attenuation.
J.Biol.Chem., 279, 2004
1N8E
DownloadVisualize
BU of 1n8e by Molmil
Fragment Double-D from Human Fibrin
Descriptor: Fibrin alpha/alpha-E chain, Fibrin beta chain, Fibrin gamma chain
Authors:Yang, Z, Pandi, L, Doolittle, R.F.
Deposit date:2002-11-20
Release date:2003-01-07
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (4.5 Å)
Cite:The Crystal Structure of Fragment Double-D from Cross-Linked Lamprey Fibrin Reveals Isopeptide Linkages across an Unexpected D-D Interface
Biochemistry, 41, 2002
3CY2
DownloadVisualize
BU of 3cy2 by Molmil
Crystal structure of human proto-oncogene serine threonine kinase (PIM1) in complex with a consensus peptide and a beta carboline ligand II
Descriptor: (4R)-7-chloro-9-methyl-1-oxo-1,2,4,9-tetrahydrospiro[beta-carboline-3,4'-piperidine]-4-carbonitrile, 1,2-ETHANEDIOL, CHLORIDE ION, ...
Authors:Filippakopoulos, P, Bullock, A, Fedorov, O, Huber, K, Bracher, F, Pike, A.C.W, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2008-04-25
Release date:2008-07-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:7,8-Dichloro-1-oxo-beta-carbolines as a Versatile Scaffold for the Development of Potent and Selective Kinase Inhibitors with Unusual Binding Modes
J.Med.Chem., 55, 2012

226262

PDB entries from 2024-10-16

PDB statisticsPDBj update infoContact PDBjnumon