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2YUD
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BU of 2yud by Molmil
Solution structure of the YTH domain in YTH domain-containing protein 1 (Putative splicing factor YT521)
Descriptor: YTH domain-containing protein 1
Authors:He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Tarada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-06
Release date:2007-10-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the YTH domain in YTH domain-containing protein 1 (Putative splicing factor YT521)
To be Published
4DMR
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BU of 4dmr by Molmil
REDUCED DMSO REDUCTASE FROM RHODOBACTER CAPSULATUS WITH BOUND DMSO SUBSTRATE
Descriptor: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, DIMETHYL SULFOXIDE, DMSO REDUCTASE, ...
Authors:Mcalpine, A.S, Bailey, S.
Deposit date:1997-04-30
Release date:1998-03-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The high resolution crystal structure of DMSO reductase in complex with DMSO.
J.Mol.Biol., 275, 1998
4RDB
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BU of 4rdb by Molmil
Crystal structure of an immunoreactive 32 kDa antigen PG49 (PG_0181) from Porphyromonas gingivalis W83 at 1.45 A resolution (PSI Community Target, Nakayama)
Descriptor: 1,2-ETHANEDIOL, ACETONE, Immunoreactive 32 kDa antigen PG49
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2014-09-18
Release date:2014-12-03
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:A Distinct Type of Pilus from the Human Microbiome.
Cell, 165, 2016
1P4D
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BU of 1p4d by Molmil
F factor TraI Relaxase Domain
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, TraI protein
Authors:Datta, S, Larkin, C, Schildbach, J.F.
Deposit date:2003-04-22
Release date:2003-10-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural insights into single-stranded DNA binding and cleavage by F factor TraI.
Structure, 11, 2003
4R88
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BU of 4r88 by Molmil
Crystal structure of 5-methylcytosine deaminase from Klebsiella pneumoniae liganded with 5-fluorocytosine
Descriptor: 1,2-ETHANEDIOL, 5-fluorocytosine, ACETIC ACID, ...
Authors:Fedorov, A.A, Fedorov, E.V, Hitchcock, D.S, Raushel, F.M, Almo, S.C.
Deposit date:2014-08-29
Release date:2014-09-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.952 Å)
Cite:Crystal structure of 5-methylcytosine deaminase from Klebsiella pneumoniae liganded with 5-fluorocytosine
To be Published
4IDA
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BU of 4ida by Molmil
Structure of the Fragaria x ananassa enone oxidoreductase in its apo form
Descriptor: 1,2-ETHANEDIOL, Ripening-induced protein, SULFATE ION
Authors:Schiefner, A, Skerra, A.
Deposit date:2012-12-12
Release date:2013-04-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis for the enzymatic formation of the key strawberry flavor compound 4-hydroxy-2,5-dimethyl-3(2H)-furanone
J.Biol.Chem., 288, 2013
1Y3S
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BU of 1y3s by Molmil
HIV-1 DIS RNA subtype F- MPD form
Descriptor: 5'-R(*CP*UP*(5BU)P*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', MAGNESIUM ION, POTASSIUM ION
Authors:Ennifar, E, Dumas, P.
Deposit date:2004-11-26
Release date:2005-11-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Polymorphism of Bulged-out Residues in HIV-1 RNA DIS Kissing Complex and Structure Comparison with Solution Studies.
J.Mol.Biol., 356, 2006
4R2K
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BU of 4r2k by Molmil
Crystal structure of H119A mutant of YdaA (Universal Stress Protein E) from Salmonella typhimurium
Descriptor: 1,2-ETHANEDIOL, OXALIC ACID, SULFATE ION, ...
Authors:Bangera, M, Murthy, M.R.N.
Deposit date:2014-08-12
Release date:2015-02-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structural and functional analysis of two universal stress proteins YdaA and YnaF from Salmonella typhimurium: possible roles in microbial stress tolerance.
J.Struct.Biol., 189, 2015
4R1Y
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BU of 4r1y by Molmil
Identification and optimization of pyridazinones as potent and selective c-Met kinase inhibitor
Descriptor: 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, 3-(diethylamino)propyl (3-{[5-(3,4-dimethoxyphenyl)-2-oxo-2H-1,3,4-thiadiazin-3(6H)-yl]methyl}phenyl)carbamate, Hepatocyte growth factor receptor
Authors:Blaukat, A, Bladt, F, Friese-Hamim, M, Knuehl, C, Fittschen, C, Graedler, U, Meyring, M, Dorsch, D, Stieber, F, Schadt, O.
Deposit date:2014-08-08
Release date:2015-03-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Identification and optimization of pyridazinones as potent and selective c-Met kinase inhibitors.
Bioorg.Med.Chem.Lett., 25, 2015
4R2J
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BU of 4r2j by Molmil
Crystal structure of YdaA (Universal Stress Protein E) from Salmonella typhimurium
Descriptor: 1,2-ETHANEDIOL, PHOSPHATE ION, Universal stress protein E, ...
Authors:Bangera, M, Murthy, M.R.N.
Deposit date:2014-08-12
Release date:2015-02-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Structural and functional analysis of two universal stress proteins YdaA and YnaF from Salmonella typhimurium: possible roles in microbial stress tolerance.
J.Struct.Biol., 189, 2015
4IPB
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BU of 4ipb by Molmil
Crystal structure of a DUF2874 family protein (BACOVA_02504) from Bacteroides ovatus ATCC 8483 at 1.62 A resolution
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, Uncharacterized protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2013-01-09
Release date:2013-02-20
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Crystal structure of a hypothetical protein (BACOVA_02504) from Bacteroides ovatus ATCC 8483 at 1.62 A resolution
To be published
4QT3
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BU of 4qt3 by Molmil
Crystal structure resolution of Plasmodium falciparum FK506 binding domain (FKBP35) in complex with Rapamycin at 1.4A resolution
Descriptor: (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, FK506-binding protein (FKBP)-type peptidyl-propyl isomerase, RAPAMYCIN IMMUNOSUPPRESSANT DRUG
Authors:Bianchin, A, Allemand, F, Bell, A, Chubb, A.J, Guichou, J.-F.
Deposit date:2014-07-07
Release date:2015-06-10
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Two crystal structures of the FK506-binding domain of Plasmodium falciparum FKBP35 in complex with rapamycin at high resolution
Acta Crystallogr.,Sect.D, 71, 2015
4IR0
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BU of 4ir0 by Molmil
Crystal Structure of Metallothiol Transferase FosB 2 from Bacillus anthracis str. Ames
Descriptor: 1,2-ETHANEDIOL, FOSFOMYCIN, Metallothiol transferase FosB 2, ...
Authors:Maltseva, N, Kim, Y, Jedrzejczak, R, Zhang, R, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2013-01-14
Release date:2013-01-23
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of Metallothiol Transferase FosB 2 from Bacillus anthracis str. Ames
To be Published
5T3B
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BU of 5t3b by Molmil
Crystal structure of BpGH50
Descriptor: 1,2-ETHANEDIOL, Glycoside Hydrolase
Authors:Giles, K, Pluvinage, B, Boraston, A.B.
Deposit date:2016-08-25
Release date:2016-10-12
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure of a glycoside hydrolase family 50 enzyme from a subfamily that is enriched in human gut microbiome bacteroidetes.
Proteins, 85, 2017
3GL0
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BU of 3gl0 by Molmil
Crystal structure of dicamba monooxygenase bound to 3,6 dichlorosalicylic acid (DCSA)
Descriptor: 1,2-ETHANEDIOL, 3,6-dichloro-2-hydroxybenzoic acid, DdmC, ...
Authors:Wilson, M.A, Dumitru, R, Jiang, W.Z, Weeks, D.P.
Deposit date:2009-03-11
Release date:2009-08-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of dicamba monooxygenase: a Rieske nonheme oxygenase that catalyzes oxidative demethylation.
J.Mol.Biol., 392, 2009
1KIY
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BU of 1kiy by Molmil
D100E trichodiene synthase
Descriptor: 1,2-ETHANEDIOL, trichodiene synthase
Authors:Rynkiewicz, M.J, Cane, D.E, Christianson, D.W.
Deposit date:2001-12-03
Release date:2002-03-13
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:X-ray crystal structures of D100E trichodiene synthase and its pyrophosphate complex reveal the basis for terpene product diversity.
Biochemistry, 41, 2002
2L8C
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BU of 2l8c by Molmil
NMR Spectroscopy and Molecular Dynamics Simulation of r(CCGCUGCGG)2 Reveal a Dynamic UU Internal Loop Found in Myotonic Dystrophy Type 1 - UU pair with zero hydrogen bond pairs
Descriptor: RNA (5'-R(*CP*CP*GP*CP*UP*GP*CP*GP*G)-3')
Authors:Parkesh, R, Fountain, M.A, Disney, M.D.
Deposit date:2011-01-07
Release date:2011-02-23
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR Spectroscopy and Molecular Dynamics Simulation of r(CCGCUGCGG)(2) Reveal a Dynamic UU Internal Loop Found in Myotonic Dystrophy Type 1.
Biochemistry, 50, 2011
7AT5
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BU of 7at5 by Molmil
Structure of protein kinase ck2 catalytic subunit (csnk2a1 gene product) in complex with the bivalent inhibitor KN2
Descriptor: 1,2-ETHANEDIOL, 2-(3,4-dichlorophenyl)ethanamine, Casein kinase II subunit alpha, ...
Authors:Lindenblatt, D, Applegate, V, Nickelsen, A, Klussmann, M, Neundorf, I, Goetz, C, Jose, J, Niefind, K.
Deposit date:2020-10-29
Release date:2021-08-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Molecular Plasticity of Crystalline CK2 alpha ' Leads to KN2, a Bivalent Inhibitor of Protein Kinase CK2 with Extraordinary Selectivity.
J.Med.Chem., 65, 2022
3PGY
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BU of 3pgy by Molmil
Serine hydroxymethyltransferase from Staphylococcus aureus, S95P mutant.
Descriptor: 1,2-ETHANEDIOL, CITRIC ACID, GLYCINE, ...
Authors:Osipiuk, J, Makowska-Grzyska, M, Kwon, K, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2010-11-02
Release date:2010-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Serine hydroxymethyltransferase from Staphylococcus aureus, S95P mutant
To be Published
1LID
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BU of 1lid by Molmil
THE ADIPOCYTE LIPID-BINDING PROTEIN AT 1.6 ANGSTROMS RESOLUTION: CRYSTAL STRUCTURES OF THE APOPROTEIN AND WITH BOUND SATURATED AND UNSATURATED FATTY ACIDS
Descriptor: ADIPOCYTE LIPID-BINDING PROTEIN, OLEIC ACID
Authors:Zu, Z, Bernlohr, D.A, Banaszak, L.J.
Deposit date:1993-12-21
Release date:1994-04-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The adipocyte lipid-binding protein at 1.6-A resolution. Crystal structures of the apoprotein and with bound saturated and unsaturated fatty acids.
J.Biol.Chem., 268, 1993
5FTV
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BU of 5ftv by Molmil
Pseudomonas aeruginosa RmlA in complex with allosteric inhibitor
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, GLUCOSE-1-PHOSPHATE THYMIDYLYLTRANSFERASE, ...
Authors:Alphey, M.S, Tran, F, Westwood, N.J, Naismith, J.H.
Deposit date:2016-01-18
Release date:2017-02-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.213 Å)
Cite:Allosteric Competitive Inhibitors of the Glucose-1-Phosphate Thymidylyltransferase (Rmla) from Pseudomonas Aeruginosa.
To be Published
4BDK
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BU of 4bdk by Molmil
Fragment-based screening identifies a new area for inhibitor binding to checkpoint kinase 2 (CHK2)
Descriptor: 1,2-ETHANEDIOL, CHECKPOINT KINASE 2, N-[(4-methoxyphenyl)methyl]quinoxaline-6-carboxamide, ...
Authors:Silva-Santisteban, M.C, Westwood, I.M, Boxall, K, Brown, N, Peacock, S, McAndrew, C, Barrie, E, Richards, M, Mirza, A, Oliver, A.W, Burke, R, Hoelder, S, Jones, K, Aherne, G.W, Blagg, J, Collins, I, Garrett, M.D, van Montfort, R.L.M.
Deposit date:2012-10-05
Release date:2013-06-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Fragment-Based Screening Maps Inhibitor Interactions in the ATP-Binding Site of Checkpoint Kinase 2.
Plos One, 8, 2013
7ATP
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BU of 7atp by Molmil
2.0 angstrom structure in complex with Ca of plant Extended Synaptotagmin 1, C2A domain
Descriptor: CALCIUM ION, CHLORIDE ION, Synaptotagmin-1, ...
Authors:Benavente, J.L, Albert, A.
Deposit date:2020-10-30
Release date:2021-08-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The structure and flexibility analysis of the Arabidopsis synaptotagmin 1 reveal the basis of its regulation at membrane contact sites.
Life Sci Alliance, 4, 2021
5X18
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BU of 5x18 by Molmil
Crystal structure of Casein kinase I homolog 1
Descriptor: Casein kinase I homolog 1, GLYCEROL, MALONIC ACID
Authors:Kikuchi, M, Shinohara, Y, Ueda, H.R, Umehara, T.
Deposit date:2017-01-25
Release date:2017-10-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Temperature-Sensitive Substrate and Product Binding Underlie Temperature-Compensated Phosphorylation in the Clock
Mol. Cell, 67, 2017
5TLW
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BU of 5tlw by Molmil
Fructose-1,6-bisphosphate aldolase from rabbit muscle in complex with the inhibitor 1-phosphate-benzene 4-bisphosphonate
Descriptor: Fructose-bisphosphate aldolase A, GLYCEROL, {[4-(phosphonooxy)phenyl]methylene}bis(phosphonic acid)
Authors:Heron, P.W, Sygusch, J.
Deposit date:2016-10-12
Release date:2017-10-25
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Bisphosphonate Inhibitors of Mammalian Glycolytic Aldolase.
J.Med.Chem., 61, 2018

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