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3B7N
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Crystal Structure of Yeast Sec14 Homolog Sfh1 in Complex with Phosphatidylinositol
Descriptor: (1R)-2-{[(S)-hydroxy{[(1S,2R,3R,4S,5S,6R)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}-1-[(octadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, ACETATE ION, PHOSPHATE ION, ...
Authors:Ortlund, E.A, Schaaf, G, Redinbo, M.R, Bankaitis, V.
Deposit date:2007-10-31
Release date:2008-02-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Functional anatomy of phospholipid binding and regulation of phosphoinositide homeostasis by proteins of the sec14 superfamily
Mol.Cell, 29, 2008
1IDN
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MAC-1 I DOMAIN METAL FREE
Descriptor: CD11B
Authors:Baldwin, E.T.
Deposit date:1998-06-10
Release date:1998-11-04
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Cation binding to the integrin CD11b I domain and activation model assessment
Structure, 6, 1998
5O2W
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BU of 5o2w by Molmil
Extended catalytic domain of Hypocrea jecorina LPMO 9A.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, COPPER (II) ION, Glycoside hydrolase family 61, ...
Authors:Karkehabadi, S, Hansson, H, Sandgren, M, Mikelssen, N.E.
Deposit date:2017-05-23
Release date:2017-09-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:High-resolution structure of a lytic polysaccharide monooxygenase from Hypocrea jecorina reveals a predicted linker as an integral part of the catalytic domain.
J. Biol. Chem., 292, 2017
5W05
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ANTI-TISSUE FACTOR ANTIBODY M59, A HUMANIZED VERSION OF 10H10
Descriptor: DI(HYDROXYETHYL)ETHER, M59 FAB HEAVY CHAIN, M59 FAB LIGHT CHAIN
Authors:Teplyakov, A, Obmolova, G, Malia, T.J, Gilliland, G.L.
Deposit date:2017-05-30
Release date:2017-06-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Structural insights into humanization of anti-tissue factor antibody 10H10.
MAbs, 10, 2018
4QZ1
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BU of 4qz1 by Molmil
yCP beta5-M45T mutant in complex with the epoxyketone inhibitor ONX 0914
Descriptor: 1,2,4-trideoxy-4-methyl-2-{[N-(morpholin-4-ylacetyl)-L-alanyl-O-methyl-L-tyrosyl]amino}-1-phenyl-D-xylitol, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, ...
Authors:Huber, E.M, Heinemeyer, W, Groll, M.
Deposit date:2014-07-27
Release date:2015-02-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Bortezomib-Resistant Mutant Proteasomes: Structural and Biochemical Evaluation with Carfilzomib and ONX 0914.
Structure, 23, 2015
1P60
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BU of 1p60 by Molmil
Structure of human dCK complexed with 2'-Deoxycytidine and ADP, Space group C 2 2 21
Descriptor: 2'-DEOXYCYTIDINE, ADENOSINE-5'-DIPHOSPHATE, Deoxycytidine kinase
Authors:Sabini, E, Ort, S, Monnerjahn, C, Konrad, M, Lavie, A.
Deposit date:2003-04-28
Release date:2003-07-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structure of human dCK suggests strategies to improve anticancer and antiviral therapy
Nat.Struct.Biol., 10, 2003
5EUL
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BU of 5eul by Molmil
Structure of the SecA-SecY complex with a translocating polypeptide substrate
Descriptor: ADENOSINE-5'-DIPHOSPHATE, AYC08, BERYLLIUM TRIFLUORIDE ION, ...
Authors:Li, L, Park, E, Ling, J, Ingram, J, Ploegh, H, Rapoport, T.A.
Deposit date:2015-11-18
Release date:2016-03-09
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Crystal structure of a substrate-engaged SecY protein-translocation channel.
Nature, 531, 2016
6CN0
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BU of 6cn0 by Molmil
2.95 Angstrom Crystal Structure of 16S rRNA Methylase from Proteus mirabilis
Descriptor: 16S rRNA (guanine(1405)-N(7))-methyltransferase, CHLORIDE ION, CITRIC ACID, ...
Authors:Minasov, G, Wawrzak, Z, Di Leo, R, Evdokimova, E, Savchenko, A, Satchell, K.J.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-03-06
Release date:2018-03-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:2.95 Angstrom Crystal Structure of 16S rRNA Methylase from Proteus mirabilis.
To Be Published
1TV5
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Plasmodium falciparum dihydroorotate dehydrogenase with a bound inhibitor
Descriptor: (2Z)-2-cyano-3-hydroxy-N-[4-(trifluoromethyl)phenyl]but-2-enamide, 3,6,9,12,15-PENTAOXATRICOSAN-1-OL, Dihydroorotate dehydrogenase homolog, ...
Authors:Hurt, D.E, Widom, J, Clardy, J.
Deposit date:2004-06-27
Release date:2005-09-06
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of Plasmodium falciparum dihydroorotate dehydrogenase with a bound inhibitor.
Acta Crystallogr.,Sect.D, 62, 2006
1D2T
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BU of 1d2t by Molmil
CRYSTAL STRUCTURE OF ACID PHOSPHATASE FROM ESCHERICHIA BLATTAE
Descriptor: ACID PHOSPHATASE, SULFATE ION
Authors:Ishikawa, K, Mihara, Y, Gondoh, K, Suzuki, E, Asano, Y.
Deposit date:1999-09-28
Release date:2000-12-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:X-ray structures of a novel acid phosphatase from Escherichia blattae and its complex with the transition-state analog molybdate.
EMBO J., 19, 2000
5O1V
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BU of 5o1v by Molmil
Crystal structure of WNK3 kinase domain in a monophosphorylated apo state (A-loop swapped)
Descriptor: 1,2-ETHANEDIOL, Serine/threonine-protein kinase WNK3
Authors:Pinkas, D.M, Bufton, J.C, Kupinska, K, Wang, D, Fairhead, M, Kopec, J, Sethi, R, Dixon-Clarke, S.E, Chalk, R, Berridge, G, Burgess-Brown, N.A, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Bullock, A, Structural Genomics Consortium (SGC)
Deposit date:2017-05-19
Release date:2017-06-28
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (1.723 Å)
Cite:Crystal structure of WNK3 kinase domain in a monophosphorylated apo state (A-loop swapped)
To Be Published
2K0D
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BU of 2k0d by Molmil
NMR structure of a mutant colicin e7 immunity protein im7 with an extended helix III
Descriptor: Colicin-E7 immunity protein
Authors:Figueiredo, A.M, Whittaker, S.B, Knowling, S.E, Spronk, C.A, Radford, S.E, Moore, G.R.
Deposit date:2008-02-01
Release date:2009-01-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Amino acid insertion reveals a necessary three-helical intermediate in the folding pathway of the colicin E7 immunity protein Im7.
J.Mol.Biol., 392, 2009
5O8P
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BU of 5o8p by Molmil
The crystal structure of DfoA bound to FAD, the desferrioxamine biosynthetic pathway cadaverine monooxygenase from the fire blight disease pathogen Erwinia amylovora
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, L-lysine 6-monooxygenase involved in desferrioxamine biosynthesis
Authors:Salomone-Stagni, M, Bartho, J.D, Polsinelli, I, Bellini, D, Walsh, M.A, Demitri, N, Benini, S.
Deposit date:2017-06-14
Release date:2018-06-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:A complete structural characterization of the desferrioxamine E biosynthetic pathway from the fire blight pathogen Erwinia amylovora.
J.Struct.Biol., 202, 2018
1P9Y
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BU of 1p9y by Molmil
Ribosome binding of E. coli Trigger Factor mutant F44L.
Descriptor: ACETIC ACID, Trigger factor
Authors:Kristensen, O, Gajhede, M.
Deposit date:2003-05-13
Release date:2003-12-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Chaperone binding at the ribosomal exit tunnel.
Structure, 11, 2003
7KKK
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BU of 7kkk by Molmil
SARS-CoV-2 Spike in complex with neutralizing nanobody Nb6
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Schoof, M.S, Faust, B.F, Saunders, R.A, Sangwan, S, Rezelj, V, Hoppe, N, Boone, M, Billesboelle, C.B, Puchades, C, Azumaya, C.M, Kratochvil, H.T, Zimanyi, M, Desphande, I, Liang, J, Dickinson, S, Nguyen, H.C, Chio, C.M, Merz, G.E, Thompson, M.C, Diwanji, D, Schaefer, K, Anand, A.A, Dobzinski, N, Zha, B.S, Simoneau, C.R, Leon, K, White, K.M, Chio, U.S, Gupta, M, Jin, M, Li, F, Liu, Y, Zhang, K, Bulkley, D, Sun, M, Smith, A.M, Rizo, A.N, Moss, F, Brilot, A.F, Pourmal, S, Trenker, R, Pospiech, T, Gupta, S, Barsi-Rhyne, B, Belyy, V, Barile-Hill, A.W, Nock, S, Liu, Y, Krogan, N.J, Ralston, C.Y, Swaney, D.L, Garcia-Sastre, A, Ott, M, Vignuzzi, M, Walter, P, Manglik, A, QCRG Structural Biology Consortium
Deposit date:2020-10-27
Release date:2020-11-11
Last modified:2021-04-21
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:An ultrapotent synthetic nanobody neutralizes SARS-CoV-2 by stabilizing inactive Spike.
Science, 370, 2020
1D4V
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BU of 1d4v by Molmil
Crystal structure of trail-DR5 complex
Descriptor: DEATH RECEPTOR 5, TNF-RELATED APOPTOSIS INDUCING LIGAND
Authors:Mongkolsapaya, J, Grimes, J.M, Stuart, D.I, Jones, E.Y, Screaton, G.R.
Deposit date:1999-10-06
Release date:1999-11-01
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the TRAIL-DR5 complex reveals mechanisms conferring specificity in apoptotic initiation
Nat.Struct.Biol., 6, 1999
5WIF
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BU of 5wif by Molmil
Crystal structure of spermidine/spermine N-acetyltransferase SpeG from Yersinia pestis
Descriptor: 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, BORIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Filippova, E.V, Wawrzak, Z, Kiryukhina, O, Shatsman, S, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-07-19
Release date:2017-08-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of spermidine/spermine N-acetyltransferase SpeG from Yersinia pestis
To Be Published
1P46
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BU of 1p46 by Molmil
T4 lysozyme core repacking mutant M106I/TA
Descriptor: 2-HYDROXYETHYL DISULFIDE, CHLORIDE ION, LYSOZYME, ...
Authors:Mooers, B.H, Datta, D, Baase, W.A, Zollars, E.S, Mayo, S.L, Matthews, B.W.
Deposit date:2003-04-21
Release date:2003-10-07
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Repacking the Core of T4 lysozyme by automated design
J.Mol.Biol., 332, 2003
5WIR
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BU of 5wir by Molmil
Structure of the TRF1-TERB1 interface
Descriptor: TERB1-TBM, Telomeric repeat-binding factor 1
Authors:Nandakumar, J, Pendlebury, D.F, Smith, E.M, Tesmer, V.M.
Deposit date:2017-07-20
Release date:2017-10-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Dissecting the telomere-inner nuclear membrane interface formed in meiosis.
Nat. Struct. Mol. Biol., 24, 2017
4D1E
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BU of 4d1e by Molmil
THE CRYSTAL STRUCTURE OF HUMAN MUSCLE ALPHA-ACTININ-2
Descriptor: ALPHA-ACTININ-2
Authors:Pinotsis, N, Salmazo, A, Sjoeblom, B, Gkougkoulia, E, Djinovic-Carugo, K.
Deposit date:2014-05-01
Release date:2014-12-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:The Structure and Regulation of Human Muscle Alpha-Actinin
Cell(Cambridge,Mass.), 159, 2014
7DKF
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Activity optimized supercomplex state4
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ...
Authors:Jeon, T.J, Lee, S.G, Yoo, S.H, Ryu, J.H, Kim, D.S, Hyun, J.K, Kim, H.M, Ryu, S.E.
Deposit date:2020-11-24
Release date:2022-05-18
Method:ELECTRON MICROSCOPY (8.3 Å)
Cite:A Dynamic Substrate Pool Revealed by cryo-EM of a Lipid-Preserved Respiratory Supercomplex.
Antioxid.Redox Signal., 2022
5WHN
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Crystal structure of the segment, NFGAFS, from the low complexity domain of TDP-43, residues 312-317
Descriptor: Segment of TAR DNA-binding protein 43
Authors:Guenther, E.L, Sawaya, M.R, Eisenberg, D.S.
Deposit date:2017-07-17
Release date:2018-04-25
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Atomic structures of TDP-43 LCD segments and insights into reversible or pathogenic aggregation.
Nat. Struct. Mol. Biol., 25, 2018
1D81
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BU of 1d81 by Molmil
THE CONFORMATIONAL VARIABILITY OF AN ADENOSINE. INOSINE BASE-PAIR IN A SYNTHETIC DNA DODECAMER
Descriptor: DNA (5'-D(*CP*GP*CP*AP*AP*AP*TP*TP*IP*GP*CP*G)-3')
Authors:Leonard, G.A, Booth, E.D, Hunter, W.N, Brown, T.
Deposit date:1992-07-07
Release date:1992-10-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The conformational variability of an adenosine.inosine base-pair in a synthetic DNA dodecamer.
Nucleic Acids Res., 20, 1992
1PPT
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BU of 1ppt by Molmil
X-RAY ANALYSIS (1.4-ANGSTROMS RESOLUTION) OF AVIAN PANCREATIC POLYPEPTIDE. SMALL GLOBULAR PROTEIN HORMONE
Descriptor: AVIAN PANCREATIC POLYPEPTIDE, ZINC ION
Authors:Blundell, T.L, Pitts, J.E, Tickle, I.J, Wood, S.P.
Deposit date:1981-01-16
Release date:1981-02-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:X-ray analysis (1. 4-A resolution) of avian pancreatic polypeptide: Small globular protein hormone.
Proc.Natl.Acad.Sci.Usa, 78, 1981
1DLG
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CRYSTAL STRUCTURE OF THE C115S ENTEROBACTER CLOACAE MURA IN THE UN-LIGANDED STATE
Descriptor: CYCLOHEXYLAMMONIUM ION, PHOSPHATE ION, UDP-N-ACETYLGLUCOSAMINE ENOLPYRUVYL TRANSFERASE MURA
Authors:Schonbrunn, E, Eschenburg, S, Krekel, F, Luger, K, Amrhein, N.
Deposit date:1999-12-09
Release date:2000-04-12
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Role of the loop containing residue 115 in the induced-fit mechanism of the bacterial cell wall biosynthetic enzyme MurA.
Biochemistry, 39, 2000

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