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7WI4
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BU of 7wi4 by Molmil
Cryo-EM structure of E.Coli FtsH protease cytosolic domains
Descriptor: ATP-dependent zinc metalloprotease FtsH, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Qiao, Z, Gao, Y.G.
Deposit date:2022-01-02
Release date:2022-06-01
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM structure of the entire FtsH-HflKC AAA protease complex.
Cell Rep, 39, 2022
1KIT
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BU of 1kit by Molmil
VIBRIO CHOLERAE NEURAMINIDASE
Descriptor: CALCIUM ION, SIALIDASE
Authors:Taylor, G.L, Crennell, S.J, Garman, E.F, Vimr, E.R, Laver, W.G.
Deposit date:1996-06-21
Release date:1997-06-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of Vibrio cholerae neuraminidase reveals dual lectin-like domains in addition to the catalytic domain.
Structure, 2, 1994
2AZA
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BU of 2aza by Molmil
STRUCTURE OF AZURIN FROM ALCALIGENES DENITRIFICANS. REFINEMENT AT 1.8 ANGSTROMS RESOLUTION AND COMPARISON OF THE TWO CRYSTALLOGRAPHICALLY INDEPENDENT MOLECULES
Descriptor: AZURIN, COPPER (II) ION, SULFATE ION
Authors:Baker, E.N, Norris, G.E.
Deposit date:1986-10-14
Release date:1987-01-15
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of azurin from Alcaligenes denitrificans refinement at 1.8 A resolution and comparison of the two crystallographically independent molecules.
J.Mol.Biol., 203, 1988
5CG9
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BU of 5cg9 by Molmil
NgTET1 in complex with 5mC DNA in space group P3221
Descriptor: 1,2-ETHANEDIOL, 2-OXOGLUTARIC ACID, DNA (5'-D(*TP*GP*TP*CP*AP*GP*(5CM)P*GP*CP*AP*TP*GP*G)-3'), ...
Authors:Hashimoto, H, Pais, J.E, Dai, N, Zhang, X, Zheng, Y, Cheng, X.
Deposit date:2015-07-09
Release date:2015-09-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.693 Å)
Cite:Structure of Naegleria Tet-like dioxygenase (NgTet1) in complexes with a reaction intermediate 5-hydroxymethylcytosine DNA.
Nucleic Acids Res., 43, 2015
7BL4
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BU of 7bl4 by Molmil
in vitro reconstituted 50S-ObgE-GMPPNP-RsfS particle
Descriptor: 23S ribosomal RNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
Authors:Hilal, T, Nikolay, R, Spahn, C.M.T.
Deposit date:2021-01-18
Release date:2021-05-12
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Snapshots of native pre-50S ribosomes reveal a biogenesis factor network and evolutionary specialization.
Mol.Cell, 81, 2021
4HCP
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BU of 4hcp by Molmil
crystal structure of Burkholderia pseudomallei effector protein chbp in complex with nedd8
Descriptor: GLYCEROL, NEDD8, Putative ATP/GTP binding protein, ...
Authors:Yao, Q, Shao, F.
Deposit date:2012-10-01
Release date:2012-11-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Structural mechanism of ubiquitin and NEDD8 deamidation catalyzed by bacterial effectors that induce macrophage-specific apoptosis.
Proc.Natl.Acad.Sci.USA, 109, 2012
1E6R
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BU of 1e6r by Molmil
Chitinase B from Serratia marcescens wildtype in complex with inhibitor allosamidin
Descriptor: 2-acetamido-2-deoxy-beta-D-allopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-allopyranose, ALLOSAMIZOLINE, CHITINASE B, ...
Authors:Komander, D, Synstad, B, Eijsink, V.G.H, Van Aalten, D.M.F.
Deposit date:2000-08-22
Release date:2001-06-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Insights Into the Catalytic Mechanism of a Family 18 Exo-Chitinase
Proc.Natl.Acad.Sci.USA, 98, 2001
7BL2
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BU of 7bl2 by Molmil
pre-50S-ObgE particle state 1
Descriptor: 23S ribosomal RNA, 50S ribosomal protein L11, 50S ribosomal protein L13, ...
Authors:Hilal, T, Nikolay, R, Schmidt, S, Spahn, C.M.T.
Deposit date:2021-01-18
Release date:2021-05-12
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Snapshots of native pre-50S ribosomes reveal a biogenesis factor network and evolutionary specialization.
Mol.Cell, 81, 2021
2B1K
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BU of 2b1k by Molmil
Crystal structure of E. coli CcmG protein
Descriptor: Thiol:disulfide interchange protein dsbE
Authors:Ouyang, N, Gao, Y.G, Hu, H.Y, Xia, Z.X.
Deposit date:2005-09-15
Release date:2006-09-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of E. coli CcmG and its mutants reveal key roles of the N-terminal beta-sheet and the fingerprint region
Proteins, 65, 2006
7BL6
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BU of 7bl6 by Molmil
50S-ObgE-GMPPNP particle
Descriptor: 23S ribosomal RNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
Authors:Hilal, T, Nikolay, R, Schmidt, S, Spahn, C.M.T.
Deposit date:2021-01-18
Release date:2021-05-12
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Snapshots of native pre-50S ribosomes reveal a biogenesis factor network and evolutionary specialization.
Mol.Cell, 81, 2021
1ZNH
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BU of 1znh by Molmil
Strong Solute-Solute Dispersive Interactions in a Protein-Ligand Complex
Descriptor: CADMIUM ION, Major Urinary Protein, OCTAN-1-OL
Authors:Malham, R, Johnstone, S, Bingham, R.J, Barratt, E, Phillips, S.E, Laughton, C.A, Homans, S.W.
Deposit date:2005-05-11
Release date:2005-12-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Strong Solute-Solute Dispersive Interactions in a Protein-Ligand Complex.
J.Am.Chem.Soc., 127, 2005
2AYA
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BU of 2aya by Molmil
Solution Structure of the C-Terminal 14 kDa Domain of the tau subunit from Escherichia coli DNA Polymerase III
Descriptor: DNA polymerase III subunit tau
Authors:Jergic, S, Dixon, N.E, Otting, G, Su, X.C.
Deposit date:2005-09-07
Release date:2006-11-14
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of Domains IVa and V of the tau subunit of Escherichia coli DNA polymerase III and interaction with the alpha subunit.
Nucleic Acids Res., 35, 2007
7BL5
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BU of 7bl5 by Molmil
pre-50S-ObgE particle
Descriptor: 23S ribosomal RNA, 50S ribosomal protein L10, 50S ribosomal protein L11, ...
Authors:Hilal, T, Nikolay, R, Spahn, C.M.T, Schmidt, S.
Deposit date:2021-01-18
Release date:2021-05-12
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Snapshots of native pre-50S ribosomes reveal a biogenesis factor network and evolutionary specialization.
Mol.Cell, 81, 2021
4HCS
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BU of 4hcs by Molmil
Structure of Novel subfamily CX chemokine solved by sulfur SAD
Descriptor: Uncharacterized protein
Authors:Rajasekaran, D, Fan, C, Meng, W, Pflugrath, J.W, Lolis, E.J.
Deposit date:2012-10-01
Release date:2013-10-16
Last modified:2014-04-23
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Structural insight into the evolution of a new chemokine family from zebrafish.
Proteins, 82, 2014
7BL3
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BU of 7bl3 by Molmil
pre-50S-ObgE particle state 2
Descriptor: 23S ribosomal RNA, 50S ribosomal protein L11, 50S ribosomal protein L13, ...
Authors:Hilal, T, Nikolay, R, Spahn, C.M.T.
Deposit date:2021-01-18
Release date:2021-05-12
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Snapshots of native pre-50S ribosomes reveal a biogenesis factor network and evolutionary specialization.
Mol.Cell, 81, 2021
1ZOL
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BU of 1zol by Molmil
native beta-PGM
Descriptor: MAGNESIUM ION, beta-phosphoglucomutase
Authors:Zhang, G, Tremblay, L.W, Dai, J, Wang, L, Dunaway-Mariano, D, Allen, K.N.
Deposit date:2005-05-13
Release date:2005-08-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Catalytic cycling in beta-phosphoglucomutase: a kinetic and structural analysis
Biochemistry, 44, 2005
2B05
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BU of 2b05 by Molmil
Crystal Structure of 14-3-3 gamma in complex with a phosphoserine peptide
Descriptor: 14-3-3 protein gamma, peptide
Authors:Papagrigoriou, E, Elkins, J, Arrowsmith, C, Zhao, Y, Debreczeni, E.J, Edwards, A, Weigelt, J, Doyle, D, von Delft, F, Turnbull, A, Yang, X.
Deposit date:2005-09-13
Release date:2005-10-11
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal Structure of 14-3-3 gamma in complex with a phosphoserine peptide
TO BE PUBLISHED
5CL4
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BU of 5cl4 by Molmil
Alkylpurine DNA glycosylase AlkD bound to DNA containing a 3-methyladenine analog or DNA containing an abasic site and a free nucleobase (71% substrate/29% product at 24 hours)
Descriptor: 7-methyl-3H-imidazo[4,5-c]pyridin-4-amine, AlkD, DNA (5'-D(*CP*CP*CP*GP*AP*(DZM)P*AP*GP*TP*CP*CP*G)-3'), ...
Authors:Mullins, E.A, Eichman, B.F.
Deposit date:2015-07-16
Release date:2015-10-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.866 Å)
Cite:The DNA glycosylase AlkD uses a non-base-flipping mechanism to excise bulky lesions.
Nature, 527, 2015
1KHN
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BU of 1khn by Molmil
E. COLI ALKALINE PHOSPHATASE MUTANT (D153HD330N) ZINC FORM
Descriptor: Alkaline phosphatase, ZINC ION
Authors:Le Du, M.H, Lamoure, C, Muller, B.H, Bulgakov, O.V, Lajeunesse, E, Menez, A, Boulain, J.C.
Deposit date:2001-11-30
Release date:2002-03-13
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Artificial evolution of an enzyme active site: structural studies of three highly active mutants of Escherichia coli alkaline phosphatase.
J.Mol.Biol., 316, 2002
5CB5
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BU of 5cb5 by Molmil
Structural Insights into the Mechanism of Escherichia coli Ymdb
Descriptor: ACETATE ION, ADENOSINE-5-DIPHOSPHORIBOSE, O-acetyl-ADP-ribose deacetylase, ...
Authors:Zhang, W, Wang, C, Song, Y, Shao, C, Zhang, X, Zang, J.
Deposit date:2015-06-30
Release date:2015-11-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural insights into the mechanism of Escherichia coli YmdB: A 2'-O-acetyl-ADP-ribose deacetylase
J.Struct.Biol., 192, 2015
4KHA
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BU of 4kha by Molmil
Structural basis of histone H2A-H2B recognition by the essential chaperone FACT
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, Histone H2A, ...
Authors:Hondele, M, Halbach, F, Hassler, M, Ladurner, A.G.
Deposit date:2013-04-30
Release date:2013-05-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural basis of histone H2A-H2B recognition by the essential chaperone FACT.
Nature, 499, 2013
1E72
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BU of 1e72 by Molmil
Myrosinase from Sinapis alba with bound gluco-hydroximolactam and sulfate or ascorbate
Descriptor: (2S,3S,4R,5R)-6-(HYDROXYAMINO)-2-(HYDROXYMETHYL)-2,3,4,5-TETRAHYDROPYRIDINE-3,4,5-TRIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Burmeister, W.P.
Deposit date:2000-08-23
Release date:2001-01-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:High resolution X-ray crystallography shows that ascorbate is a cofactor for myrosinase and substitutes for the function of the catalytic base.
J. Biol. Chem., 275, 2000
3ANP
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BU of 3anp by Molmil
Crystal structure of Thermus thermophilus FadR, a TetR familly transcriptional repressor, in complex with lauroyl-CoA.
Descriptor: DODECYL-COA, LAURIC ACID, Transcriptional repressor, ...
Authors:Agari, Y, Agari, K, Sakamoto, K, Kuramitsu, S, Shinkai, A.
Deposit date:2010-09-06
Release date:2011-03-09
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:TetR-family transcriptional repressor Thermus thermophilus FadR controls fatty acid degradation.
Microbiology, 157, 2011
3CSG
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BU of 3csg by Molmil
Crystal Structure of Monobody YS1(MBP-74)/Maltose Binding Protein Fusion Complex
Descriptor: Maltose-binding protein Monobody YS1 Fusion
Authors:Gilbreth, R.N, Koide, S.
Deposit date:2008-04-09
Release date:2008-07-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.798 Å)
Cite:A Dominant Conformational Role for Amino Acid Diversity in Minimalist Protein-Protein Interfaces
J.Mol.Biol., 381, 2008
5CNB
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BU of 5cnb by Molmil
Ultrafast dynamics in myoglobin: 0.5 ps time delay
Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Barends, T.R.M, Foucar, L, Ardevol, A, Nass, K.J, Aquila, A, Botha, S, Doak, R.B, Falahati, K, Hartmann, E, Hilpert, M, Heinz, M, Hoffmann, M.C, Koefinger, J, Koglin, J, Kovacsova, G, Liang, M, Milathianaki, D, Lemke, H.T, Reinstein, J, Roome, C.M, Shoeman, R.L, Williams, G.J, Burghardt, I, Hummer, G, Boutet, S, Schlichting, I.
Deposit date:2015-07-17
Release date:2015-09-16
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Direct observation of ultrafast collective motions in CO myoglobin upon ligand dissociation.
Science, 350, 2015

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