6IDO
| Crystal structure of Klebsiella pneumoniae sigma4 of sigmaS fusing with the RNA polymerase beta-flap-tip-helix in complex with -35 element DNA | 分子名称: | DNA (5'-D(P*CP*CP*AP*CP*TP*TP*GP*AP*CP*AP*AP*AP*TP*CP*G)-3'), DNA (5'-D(P*GP*AP*TP*TP*TP*GP*TP*CP*AP*AP*GP*TP*GP*GP*C)-3'), RNA polymerase sigma factor RpoS,RNA polymerase beta-flap-tip-helix | 著者 | Lou, Y.C, Chien, C.Y, Chen, C, Hsu, C.H. | 登録日 | 2018-09-10 | 公開日 | 2019-09-11 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (3.748 Å) | 主引用文献 | Structural basis for -35 element recognition by sigma4chimera proteins and their interactions with PmrA response regulator. Proteins, 88, 2020
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1KU7
| Crystal Structure of Thermus aquatics RNA Polymerase SigmaA Subunit Region 4 Bound to-35 Element DNA | 分子名称: | 5'-D(*CP*CP*TP*TP*GP*AP*CP*AP*AP*AP*G)-3', 5'-D(*CP*CP*TP*TP*TP*GP*TP*CP*AP*AP*G)-3', sigma factor sigA | 著者 | Campbell, E.A, Muzzin, O, Chlenov, M, Sun, J.L, Olson, C.A, Weinman, O, Trester-Zedlitz, M.L, Darst, S.A. | 登録日 | 2002-01-21 | 公開日 | 2002-03-29 | 最終更新日 | 2024-02-14 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Structure of the bacterial RNA polymerase promoter specificity sigma subunit. Mol.Cell, 9, 2002
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1KU3
| Crystal Structure of Thermus aquaticus RNA Polymerase Sigma Subunit Fragment, Region 4 | 分子名称: | sigma factor sigA | 著者 | Campbell, E.A, Muzzin, O, Chlenov, M, Sun, J.L, Olson, C.A, Weinman, O, Trester-Zedlitz, M.L, Darst, S.A. | 登録日 | 2002-01-21 | 公開日 | 2002-04-03 | 最終更新日 | 2024-02-14 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Structure of the bacterial RNA polymerase promoter specificity sigma subunit. Mol.Cell, 9, 2002
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1TTY
| Solution structure of sigma A region 4 from Thermotoga maritima | 分子名称: | RNA polymerase sigma factor rpoD | 著者 | Lambert, L.J, Wei, Y, Schirf, V, Demeler, B, Werner, M.H. | 登録日 | 2004-06-23 | 公開日 | 2004-11-23 | 最終更新日 | 2022-03-02 | 実験手法 | SOLUTION NMR | 主引用文献 | T4 AsiA blocks DNA recognition by remodeling sigma(70) region 4 Embo J., 23, 2004
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6FI7
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3HUG
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1TLH
| T4 AsiA bound to sigma70 region 4 | 分子名称: | 10 kDa anti-sigma factor, RNA polymerase sigma factor rpoD | 著者 | Lambert, L.J, Wei, Y, Schirf, V, Demeler, B, Werner, M.H. | 登録日 | 2004-06-09 | 公開日 | 2004-11-23 | 最終更新日 | 2024-05-01 | 実験手法 | SOLUTION NMR | 主引用文献 | T4 AsiA blocks DNA recognition by remodeling sigma(70) region 4 Embo J., 23, 2004
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4G8X
| G1 ORF67 / Staphyloccus aureus sigmaA domain 4 complex | 分子名称: | ORF067, RNA polymerase sigma factor rpoD | 著者 | Darst, S.A, Osmundson, J.S, Montero-Diaz, C.M, Hochschild, A. | 登録日 | 2012-07-23 | 公開日 | 2013-08-07 | 実験手法 | X-RAY DIFFRACTION (3.001 Å) | 主引用文献 | Promoter-specific transcription inhibition in Staphylococcus aureus by a phage protein. Cell(Cambridge,Mass.), 151, 2012
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4G6D
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4G94
| G1 ORF67 / Staphyloccus aureus sigmaA domain 4 complex | 分子名称: | ORF067, RNA polymerase sigma factor rpoD | 著者 | Darst, S.A, Osmundson, J.S, Montero-Diaz, C.M, Hochschild, A. | 登録日 | 2012-07-23 | 公開日 | 2013-01-23 | 最終更新日 | 2024-02-28 | 実験手法 | X-RAY DIFFRACTION (1.9971 Å) | 主引用文献 | Promoter-specific transcription inhibition in Staphylococcus aureus by a phage protein. Cell(Cambridge,Mass.), 151, 2012
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1NR3
| SOLUTION STRUCTURE OF THE PROTEIN MTH0916: THE NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET TT212 | 分子名称: | DNA-binding protein tfx | 著者 | Shen, Y, Liu, G, Bhaskaran, R, Yee, A, Arrowsmith, C, Szyperski, T, Northeast Structural Genomics Consortium (NESG) | 登録日 | 2003-01-23 | 公開日 | 2003-06-10 | 最終更新日 | 2024-05-08 | 実験手法 | SOLUTION NMR | 主引用文献 | SOLUTION STRUCTURE OF THE PROTEIN MTH0916: THE NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET TT212 To be Published
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8HNO
| Archaeal transcription factor Wild type | 分子名称: | Archaeal transcription regulator | 著者 | Bae, D.W, Cha, S.S. | 登録日 | 2022-12-08 | 公開日 | 2023-09-13 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.84 Å) | 主引用文献 | An archaeal transcription factor EnfR with a novel 'eighth note' fold controls hydrogen production of a hyperthermophilic archaeon Thermococcus onnurineus NA1. Nucleic Acids Res., 51, 2023
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8HNP
| Archaeal transcription factor Mutant | 分子名称: | Archaeal transcription regulator | 著者 | Bae, D.W, Cha, S.S. | 登録日 | 2022-12-08 | 公開日 | 2023-09-13 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (3.39 Å) | 主引用文献 | An archaeal transcription factor EnfR with a novel 'eighth note' fold controls hydrogen production of a hyperthermophilic archaeon Thermococcus onnurineus NA1. Nucleic Acids Res., 51, 2023
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2Z2S
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3WOD
| RNA polymerase-gp39 complex | 分子名称: | DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... | 著者 | Tagami, S, Sekine, S, Minakhin, L, Esyunina, D, Akasaka, R, Shirouzu, M, Kulbachinskiy, A, Severinov, K, Yokoyama, S. | 登録日 | 2013-12-26 | 公開日 | 2014-03-12 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (3.6 Å) | 主引用文献 | Structural basis for promoter specificity switching of RNA polymerase by a phage factor. Genes Dev., 28, 2014
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8U3B
| Cryo-EM structure of E. coli NarL-transcription activation complex at 3.2A | 分子名称: | DNA (69-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... | 著者 | Liu, B, Kompaniiets, D, Wang, D. | 登録日 | 2023-09-07 | 公開日 | 2024-01-17 | 最終更新日 | 2024-02-21 | 実験手法 | ELECTRON MICROSCOPY (3.23 Å) | 主引用文献 | Structural basis for transcription activation by the nitrate-responsive regulator NarL. Nucleic Acids Res., 52, 2024
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1IW7
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3T72
| PhoB(E)-Sigma70(4)-(RNAP-Betha-flap-tip-helix)-DNA Transcription Activation Sub-Complex | 分子名称: | PHO BOX DNA (STRAND 1), PHO BOX DNA (STRAND 2), Phosphate regulon transcriptional regulatory protein phoB, ... | 著者 | Blanco, A.G, Canals, A, Bernues, J, Sola, M, Coll, M. | 登録日 | 2011-07-29 | 公開日 | 2011-09-21 | 最終更新日 | 2023-07-26 | 実験手法 | X-RAY DIFFRACTION (4.33 Å) | 主引用文献 | The structure of a transcription activation subcomplex reveals how sigma (70) is recruited to PhoB promoters. Embo J., 30, 2011
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2BE5
| Crystal structure of the T. Thermophilus RNA polymerase holoenzyme in complex with inhibitor tagetitoxin | 分子名称: | DNA-directed RNA polymerase alpha chain, DNA-directed RNA polymerase beta chain, DNA-directed RNA polymerase beta' chain, ... | 著者 | Vassylyev, D.G, Svetlov, V, Vassylyeva, M.N, Perederina, A, Igarashi, N, Matsugaki, N, Wakatsuki, S, Artsimovitch, I, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2005-10-22 | 公開日 | 2005-11-08 | 最終更新日 | 2023-08-23 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Structural basis for transcription inhibition by tagetitoxin Nat.Struct.Mol.Biol., 12, 2005
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2P7V
| Crystal structure of the Escherichia coli regulator of sigma 70, Rsd, in complex with sigma 70 domain 4 | 分子名称: | MAGNESIUM ION, RNA polymerase sigma factor rpoD, Regulator of sigma D | 著者 | Patikoglou, G.A, Westblade, L.F, Campbell, E.A, Lamour, V, Lane, W.J, Darst, S.A. | 登録日 | 2007-03-20 | 公開日 | 2007-08-21 | 最終更新日 | 2024-02-21 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | Crystal structure of the Escherichia coli regulator of sigma70, Rsd, in complex with sigma70 domain 4. J.Mol.Biol., 372, 2007
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3IYD
| Three-dimensional EM structure of an intact activator-dependent transcription initiation complex | 分子名称: | ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator, DNA (98-MER), ... | 著者 | Hudson, B.P, Quispe, J, Lara, S, Kim, Y, Berman, H, Arnold, E, Ebright, R.H, Lawson, C.L. | 登録日 | 2009-08-01 | 公開日 | 2009-11-10 | 最終更新日 | 2024-02-21 | 実験手法 | ELECTRON MICROSCOPY (19.799999 Å) | 主引用文献 | Three-dimensional EM structure of an intact activator-dependent transcription initiation complex Proc.Natl.Acad.Sci.USA, 106, 2009
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2Q1Z
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2CW0
| Crystal structure of Thermus thermophilus RNA polymerase holoenzyme at 3.3 angstroms resolution | 分子名称: | DNA-directed RNA polymerase alpha chain, DNA-directed RNA polymerase beta chain, DNA-directed RNA polymerase beta' chain, ... | 著者 | Tuske, S, Sarafianos, S.G, Wang, X, Hudson, B, Sineva, E, Mukhopadhyay, J, Birktoft, J.J, Leroy, O, Ismail, S, Clark Jr, A.D, Dharia, C, Napoli, A, Laptenko, O, Lee, J, Borukhov, S, Ebright, R.H, Arnold, E. | 登録日 | 2005-06-15 | 公開日 | 2005-09-20 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (3.3 Å) | 主引用文献 | Inhibition of bacterial RNA polymerase by streptolydigin: stabilization of a straight-bridge-helix active-center conformation Cell(Cambridge,Mass.), 122, 2005
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3N97
| RNA polymerase alpha C-terminal domain (E. coli) and sigma region 4 (T. aq. mutant) bound to (UP,-35 element) DNA | 分子名称: | ACETATE ION, DNA (5'-D(*CP*CP*AP*TP*GP*TP*CP*AP*AP*GP*TP*AP*CP*TP*TP*TP*TP*TP*TP*CP*C)-3'), DNA (5'-D(*TP*GP*GP*AP*AP*AP*AP*AP*AP*GP*TP*AP*CP*TP*TP*GP*AP*CP*AP*TP*GP*G)-3'), ... | 著者 | Lara-Gonzalez, S, Birktoft, J.J, Lawson, C.L. | 登録日 | 2010-05-28 | 公開日 | 2011-06-08 | 最終更新日 | 2023-09-06 | 実験手法 | X-RAY DIFFRACTION (3.252 Å) | 主引用文献 | The RNA Polymerase alpha Subunit Recognizes the DNA Shape of the Upstream Promoter Element. Biochemistry, 59, 2020
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8D5V
| WhiB6 bound to the SigmaAr4-RNAP Beta flap tip chimera | 分子名称: | IRON/SULFUR CLUSTER, Probable transcriptional regulator WhiB6, RNA polymerase sigma factor SigA,DNA-directed RNA polymerase subunit beta | 著者 | Wan, T, Zhang, L.M. | 登録日 | 2022-06-06 | 公開日 | 2023-06-14 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Crystal structure of WhiB6 and SigA4-betaTip complex To Be Published
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