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PDB: 589 results

5TG7
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OXA-24/40 in Complex with Boronic Acid BA3
Descriptor: (3-{[(furan-2-yl)methyl]carbamoyl}phenyl)boronic acid, BICARBONATE ION, Beta-lactamase, ...
Authors:Powers, R.A, Werner, J.P, Mitchell, J.M.
Deposit date:2016-09-27
Release date:2017-01-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Exploring the potential of boronic acids as inhibitors of OXA-24/40 beta-lactamase.
Protein Sci., 26, 2017
5VFD
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Diazabicyclooctenone ETX2514 bound to Class D beta lactamase OXA-24 from A. baumannii
Descriptor: (2S,5R)-1-formyl-4-methyl-5-[(sulfooxy)amino]-1,2,5,6-tetrahydropyridine-2-carboxamide, (2S,5R)-4-methyl-7-oxo-6-(sulfooxy)-1,6-diazabicyclo[3.2.1]oct-3-ene-2-carboxamide, Beta-lactamase, ...
Authors:Olivier, N.B, Lahiri, S.
Deposit date:2017-04-07
Release date:2017-06-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:ETX2514 is a broad-spectrum beta-lactamase inhibitor for the treatment of drug-resistant Gram-negative bacteria including Acinetobacter baumannii.
Nat Microbiol, 2, 2017
5WI3
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Structure of Acinetobacter baumannii carbapenemase OXA-239 K82D bound to cefotaxime
Descriptor: CEFOTAXIME, C3' cleaved, open, ...
Authors:Harper, T.M, June, C.M, Powers, R.A, Leonard, D.A.
Deposit date:2017-07-18
Release date:2017-12-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Multiple substitutions lead to increased loop flexibility and expanded specificity in Acinetobacter baumannii carbapenemase OXA-239.
Biochem. J., 475, 2018
3FV7
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OXA-24 beta-lactamase complex with SA4-44 inhibitor
Descriptor: (2S)-2-[[2-methanoyl-7-(methoxycarbonylamino)indolizin-3-yl]amino]-3-methyl-3-sulfino-butanoic acid, Beta-lactamase OXA-24
Authors:Bou, G, Santillana, E, Sheri, A, Beceiro, A, Sampson, J.M, Kalp, M, Bethel, C.R, Distler, A.M, Drawz, S.M, Pagadala, S.R, Van den Akker, F, Bonomo, R.A, Romero, A, Buynak, J.D.
Deposit date:2009-01-15
Release date:2010-02-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Design, synthesis, and crystal structures of 6-alkylidene-2'-substituted penicillanic acid sulfones as potent inhibitors of Acinetobacter baumannii OXA-24 carbapenemase.
J.Am.Chem.Soc., 132, 2010
3FYZ
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OXA-24 beta-lactamase complex with SA4-17 inhibitor
Descriptor: (2S,3R)-2-[(7-aminocarbonyl-2-methanoyl-indolizin-3-yl)amino]-4-aminocarbonyloxy-3-methyl-3-sulfino-butanoic acid, Beta-lactamase OXA-24, TETRAETHYLENE GLYCOL
Authors:Romero, A, Santillana, E.
Deposit date:2009-01-23
Release date:2010-02-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Design, synthesis, and crystal structures of 6-alkylidene-2'-substituted penicillanic acid sulfones as potent inhibitors of Acinetobacter baumannii OXA-24 carbapenemase.
J.Am.Chem.Soc., 132, 2010
3FZC
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OXA-24 beta-lactamase complex with SA3-53 inhibitor
Descriptor: (2S,3R)-4-(2-aminoethylcarbamoyloxy)-2-[(2-methanoylindolizin-3-yl)amino]-3-methyl-3-sulfino-butanoic acid, Beta-lactamase OXA-24, TETRAETHYLENE GLYCOL
Authors:Romero, A, Santillana, E.
Deposit date:2009-01-24
Release date:2010-02-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Design, synthesis, and crystal structures of 6-alkylidene-2'-substituted penicillanic acid sulfones as potent inhibitors of Acinetobacter baumannii OXA-24 carbapenemase.
J.Am.Chem.Soc., 132, 2010
3G4P
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OXA-24 beta-lactamase at pH 7.5
Descriptor: Beta-lactamase OXA-24
Authors:Santillana, E, Romero, A.
Deposit date:2009-02-04
Release date:2010-02-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Design, synthesis, and crystal structures of 6-alkylidene-2'-substituted penicillanic acid sulfones as potent inhibitors of Acinetobacter baumannii OXA-24 carbapenemase
J.Am.Chem.Soc., 132, 2010
3HBR
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Crystal structure of OXA-48 beta-lactamase
Descriptor: 1,2-ETHANEDIOL, OXA-48
Authors:Calderone, V, Mangani, S, Benvenuti, M, Rossolini, G.M, Docquier, J.D.
Deposit date:2009-05-05
Release date:2009-06-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the OXA-48 beta-lactamase reveals mechanistic diversity among class D carbapenemases.
Chem.Biol., 16, 2009
3ISG
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Structure of the class D beta-lactamase OXA-1 in complex with doripenem
Descriptor: (2S,3R,4S)-2-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-3-methyl-4-({(3S,5S)-5-[(sulfamoylamino)methyl]pyrrolidin-3-yl}sulfanyl)-3,4-dihydro-2H-pyrrole-5-carboxylic acid, (4S)-2-METHYL-2,4-PENTANEDIOL, Beta-lactamase OXA-1
Authors:Powers, R.A.
Deposit date:2009-08-25
Release date:2009-12-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The 1.4 A crystal structure of the class D beta-lactamase OXA-1 complexed with doripenem.
Biochemistry, 48, 2009
3IF6
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Crystal structure of OXA-46 beta-lactamase from P. aeruginosa
Descriptor: 1,2-ETHANEDIOL, HEXAETHYLENE GLYCOL, L(+)-TARTARIC ACID, ...
Authors:Docquier, J.D, Benvenuti, M, Calderone, V, Giuliani, F, Kapetis, D, De Luca, F, Rossolini, G.M, Mangani, S.
Deposit date:2009-07-24
Release date:2010-03-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the narrow-spectrum OXA-46 class D beta-lactamase: relationship between active-site lysine carbamylation and inhibition by polycarboxylates
Antimicrob.Agents Chemother., 54, 2010
4JF5
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Structure of OXA-23 at pH 4.1
Descriptor: 1,2-ETHANEDIOL, Beta-lactamase, CITRATE ANION
Authors:Smith, C.A, Vakulenko, S.B.
Deposit date:2013-02-27
Release date:2013-09-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Structural Basis for Carbapenemase Activity of the OXA-23 beta-Lactamase from Acinetobacter baumannii.
Chem.Biol., 20, 2013
4JF4
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OXA-23 meropenem complex
Descriptor: (4R,5S)-3-{[(3S,5S)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfanyl}-5-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-4-methyl-4,5-dihydro-1H-pyrrole-2-carboxylic acid, 1,2-ETHANEDIOL, Beta-lactamase
Authors:Smith, C.A, Vakulenko, S.B, Toth, M.
Deposit date:2013-02-27
Release date:2013-09-25
Last modified:2013-10-09
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Structural Basis for Carbapenemase Activity of the OXA-23 beta-Lactamase from Acinetobacter baumannii.
Chem.Biol., 20, 2013
4JBF
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Crystal structure of peptidoglycan glycosyltransferase from Atopobium parvulum DSM 20469.
Descriptor: Peptidoglycan glycosyltransferase, TETRAETHYLENE GLYCOL
Authors:Filippova, E.V, Wawrzak, Z, Minasov, G, Shuvalova, L, Kiryukhina, O, Babnigg, G, Rubin, E, Sacchettini, J, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG), Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MTBI)
Deposit date:2013-02-19
Release date:2013-03-20
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Crystal structure of peptidoglycan glycosyltransferase from Atopobium parvulum DSM 20469.
To be Published
4JF6
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Structure of OXA-23 at pH 7.0
Descriptor: Beta-lactamase, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Smith, C.A, Vakulenko, S.B.
Deposit date:2013-02-27
Release date:2013-09-25
Last modified:2013-10-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Basis for Carbapenemase Activity of the OXA-23 beta-Lactamase from Acinetobacter baumannii.
Chem.Biol., 20, 2013
4K0X
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X-ray Crystal Structure of OXA-23 from Acinetobacter baumannii
Descriptor: BICARBONATE ION, Beta-lactamase
Authors:Klinger, N.V, Ramey, M.E, Leonard, D.A, Powers, R.A.
Deposit date:2013-04-04
Release date:2013-08-07
Last modified:2013-10-23
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Structures of the Class D Carbapenemases OXA-23 and OXA-146: Mechanistic Basis of Activity against Carbapenems, Extended-Spectrum Cephalosporins, and Aztreonam.
Antimicrob.Agents Chemother., 57, 2013
4K0W
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X-ray crystal structure of OXA-23 A220 duplication clinical variant
Descriptor: 1,2-ETHANEDIOL, BICARBONATE ION, Beta-lactamase, ...
Authors:Kaitany, K.J, Klinger, N.V, Leonard, D.A, Powers, R.A.
Deposit date:2013-04-04
Release date:2013-08-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structures of the Class D Carbapenemases OXA-23 and OXA-146: Mechanistic Basis of Activity against Carbapenems, Extended-Spectrum Cephalosporins, and Aztreonam.
Antimicrob.Agents Chemother., 57, 2013
4MLL
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BU of 4mll by Molmil
The 1.4 A structure of the class D beta-lactamase OXA-1 K70D complexed with oxacillin
Descriptor: (2R,4S)-5,5-dimethyl-2-[(1R)-1-{[(5-methyl-3-phenyl-1,2-oxazol-4-yl)carbonyl]amino}-2-oxoethyl]-1,3-thiazolidine-4-carb oxylic acid, (4S)-2-METHYL-2,4-PENTANEDIOL, Beta-lactamase OXA-1, ...
Authors:June, C.M, Vallier, B.C, Bonomo, R.A, Leonard, D.A, Powers, R.A.
Deposit date:2013-09-06
Release date:2013-10-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Structural Origins of Oxacillinase Specificity in Class D beta-Lactamases.
Antimicrob.Agents Chemother., 58, 2014
4MNR
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BU of 4mnr by Molmil
Crystal Structure of D,D-Transpeptidase Domain of Peptidoglycan Glycosyltransferase from Eggerthella lenta
Descriptor: ACETIC ACID, MAGNESIUM ION, Peptidoglycan glycosyltransferase
Authors:Kim, Y, Wu, R, Endres, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-09-11
Release date:2013-09-25
Method:X-RAY DIFFRACTION (1.653 Å)
Cite:Crystal Structure of D,D-Transpeptidase Domain of Peptidoglycan Glycosyltransferase from Eggerthella lenta
To be Published
4N1X
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Structure of a putative peptidoglycan glycosyltransferase from Atopobium parvulum in complex with penicillin G
Descriptor: OPEN FORM - PENICILLIN G, Peptidoglycan glycosyltransferase
Authors:Filippova, E.V, Minasov, G, Shuvalova, L, Kiryukhina, O, Babnigg, G, Rubin, E, Sacchettini, J, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG), Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MTBI)
Deposit date:2013-10-04
Release date:2013-10-30
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of a putative peptidoglycan glycosyltransferase from Atopobium parvulum in complex with penicillin G
To be Published
5KZH
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High Resolution Structure of Acinetobacter baumannii beta-lactamase OXA-51
Descriptor: ACETATE ION, Beta-lactamase, FORMIC ACID
Authors:June, C.M, Powers, R.A, Leonard, D.A.
Deposit date:2016-07-25
Release date:2016-08-17
Last modified:2019-12-11
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:The structure of a doripenem-bound OXA-51 class D beta-lactamase variant with enhanced carbapenemase activity.
Protein Sci., 25, 2016
5L2F
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High Resolution Structure of Acinetobacter baumannii beta-lactamase OXA-51 I129L/K83D bound to doripenem
Descriptor: (4R,5S)-5-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-4-methyl-3-({(3S,5S)-5-[(sulfamoylamino)methyl]pyrrolidin-3-yl}sulfanyl)-4,5-dihydro-1H-pyrrole-2-carboxylic acid, ACETATE ION, Beta-lactamase, ...
Authors:June, C.M, Powers, R.A, Leonard, D.A, Muckenthaler, T.
Deposit date:2016-08-01
Release date:2016-09-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:The structure of a doripenem-bound OXA-51 class D beta-lactamase variant with enhanced carbapenemase activity.
Protein Sci., 25, 2016
5MMY
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BU of 5mmy by Molmil
Crystal structure of OXA10 with HEPES
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Beta-lactamase OXA-10, ...
Authors:Brem, J.
Deposit date:2016-12-12
Release date:2017-07-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:(13)C-Carbamylation as a mechanistic probe for the inhibition of class D beta-lactamases by avibactam and halide ions.
Org. Biomol. Chem., 15, 2017
5MOX
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BU of 5mox by Molmil
OXA-10 Avibactam complex with bound CO2
Descriptor: (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide, Beta-lactamase OXA-10, CARBON DIOXIDE, ...
Authors:Brem, J.
Deposit date:2016-12-14
Release date:2017-07-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:(13)C-Carbamylation as a mechanistic probe for the inhibition of class D beta-lactamases by avibactam and halide ions.
Org. Biomol. Chem., 15, 2017
5MOZ
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BU of 5moz by Molmil
OXA-10 Avibactam complex with bound Iodide
Descriptor: (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide, Beta-lactamase OXA-10, CHLORIDE ION, ...
Authors:Brem, J.
Deposit date:2016-12-15
Release date:2017-07-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:(13)C-Carbamylation as a mechanistic probe for the inhibition of class D beta-lactamases by avibactam and halide ions.
Org. Biomol. Chem., 15, 2017
5MNU
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OXA-10 Avibactam complex with bound bromide
Descriptor: (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide, BROMIDE ION, Beta-lactamase OXA-10, ...
Authors:Brem, J, McDonough, M, Clifton, I.
Deposit date:2016-12-13
Release date:2017-07-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:(13)C-Carbamylation as a mechanistic probe for the inhibition of class D beta-lactamases by avibactam and halide ions.
Org. Biomol. Chem., 15, 2017

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PDB entries from 2024-05-22

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