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PDB: 19 results

5EIU
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BU of 5eiu by Molmil
Mini TRIM5 B-box 2 dimer C2 crystal form
Descriptor: TRIM protein-E3 ligase Chimera, ZINC ION
Authors:Wagner, J.M, Doss, G, Pornillos, O.
Deposit date:2015-10-30
Release date:2016-06-15
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.908 Å)
Cite:Mechanism of B-box 2 domain-mediated higher-order assembly of the retroviral restriction factor TRIM5 alpha.
Elife, 5, 2016
3ERR
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BU of 3err by Molmil
Microtubule binding domain from mouse cytoplasmic dynein as a fusion with seryl-tRNA synthetase
Descriptor: ADENOSINE MONOPHOSPHATE, fusion protein of microtubule binding domain from mouse cytoplasmic dynein and seryl-tRNA synthetase from Thermus thermophilus
Authors:Carter, A.P.
Deposit date:2008-10-03
Release date:2008-11-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Structure and functional role of dynein's microtubule-binding domain.
Science, 322, 2008
5F7T
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BU of 5f7t by Molmil
TRIM5 B-box2 and coiled-coil chimera
Descriptor: Tripartite motif-containing protein 5,Serine--tRNA ligase,Tripartite motif-containing protein 5, ZINC ION
Authors:Wagner, J.M, Doss, G, Pornillos, O.
Deposit date:2015-12-08
Release date:2016-06-15
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.292 Å)
Cite:Mechanism of B-box 2 domain-mediated higher-order assembly of the retroviral restriction factor TRIM5 alpha.
Elife, 5, 2016
5VA4
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BU of 5va4 by Molmil
TRIM-Cyclophilin A B-box 2 and coiled-coil chimera
Descriptor: TRIM5/cyclophilin A V4 fusion protein, ZINC ION
Authors:Wagner, J.M, Ganser-Pornillos, B.K, Pornillos, O.W.
Deposit date:2017-03-24
Release date:2017-11-22
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.306 Å)
Cite:General Model for Retroviral Capsid Pattern Recognition by TRIM5 Proteins.
J. Virol., 92, 2018
1SES
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BU of 1ses by Molmil
CRYSTAL STRUCTURES AT 2.5 ANGSTROMS RESOLUTION OF SERYL-TRNA SYNTHETASE COMPLEXED WITH TWO DIFFERENT ANALOGUES OF SERYL-ADENYLATE
Descriptor: ADENOSINE MONOPHOSPHATE, SERYL-HYDROXAMATE-ADENOSINE MONOPHOSPHATE, SERYL-tRNA SYNTHETASE
Authors:Cusack, S, Belrhali, H.
Deposit date:1994-02-21
Release date:1994-07-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures at 2.5 angstrom resolution of seryl-tRNA synthetase complexed with two analogs of seryl adenylate.
Science, 263, 1994
1SRY
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BU of 1sry by Molmil
REFINED CRYSTAL STRUCTURE OF THE SERYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS AT 2.5 ANGSTROMS RESOLUTION
Descriptor: SERYL-tRNA SYNTHETASE
Authors:Fujinaga, M, Berthet-Colominas, C, Cusack, S.
Deposit date:1993-08-10
Release date:1994-01-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Refined crystal structure of the seryl-tRNA synthetase from Thermus thermophilus at 2.5 A resolution.
J.Mol.Biol., 234, 1993
1SET
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BU of 1set by Molmil
CRYSTAL STRUCTURES AT 2.5 ANGSTROMS RESOLUTION OF SERYL-TRNA SYNTHETASE COMPLEXED WITH TWO DIFFERENT ANALOGUES OF SERYL-ADENYLATE
Descriptor: 5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE, SERYL-tRNA SYNTHETASE
Authors:Cusack, S, Belrhali, H.
Deposit date:1994-02-21
Release date:1994-07-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structures at 2.5 angstrom resolution of seryl-tRNA synthetase complexed with two analogs of seryl adenylate.
Science, 263, 1994
1SER
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BU of 1ser by Molmil
THE 2.9 ANGSTROMS CRYSTAL STRUCTURE OF T. THERMOPHILUS SERYL-TRNA SYNTHETASE COMPLEXED WITH TRNA SER
Descriptor: PROTEIN (SERYL-TRNA SYNTHETASE (E.C.6.1.1.11)), TRNASER
Authors:Biou, S, Cusack, V, Yaremchuk, A, Tukalo, M.
Deposit date:1994-02-21
Release date:1994-04-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The 2.9 A crystal structure of T. thermophilus seryl-tRNA synthetase complexed with tRNA(Ser).
Science, 263, 1994
8FD6
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BU of 8fd6 by Molmil
Engineered human dynein motor domain in the microtubule-unbound state in the buffer containing ATP-Vi
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cytoplasmic dynein 1 heavy chain 1,Serine--tRNA ligase, ...
Authors:Ton, W, Wang, Y, Chai, P.
Deposit date:2022-12-02
Release date:2023-06-21
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Microtubule-binding-induced allostery triggers LIS1 dissociation from dynein prior to cargo transport.
Nat.Struct.Mol.Biol., 30, 2023
5AYH
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BU of 5ayh by Molmil
Structure of the entire dynein stalk region
Descriptor: Cytoplasmic dynein 1 heavy chain 1
Authors:Kurisu, G, Nishikawa, Y, Inatomi, M.
Deposit date:2015-08-21
Release date:2015-12-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.011 Å)
Cite:Structural Change in the Dynein Stalk Region Associated with Two Different Affinities for the Microtubule
J.Mol.Biol., 428, 2016
8FDT
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BU of 8fdt by Molmil
Engineered human dynein motor domain in the microtubule-unbound state with LIS1 complex in the buffer containing ATP-Vi
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cytoplasmic dynein 1 heavy chain 1,Serine--tRNA ligase, ...
Authors:Ton, W, Wang, Y, Chai, P.
Deposit date:2022-12-04
Release date:2023-06-21
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Microtubule-binding-induced allostery triggers LIS1 dissociation from dynein prior to cargo transport.
Nat.Struct.Mol.Biol., 30, 2023
5IEA
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BU of 5iea by Molmil
TRIM5 B-box2 and coiled-coil chimera
Descriptor: Tripartite motif-containing protein 5, Serine--tRNA ligase Chimera, ZINC ION
Authors:Wagner, J.M, Doss, G, Pornillos, O.
Deposit date:2016-02-25
Release date:2016-06-15
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.258 Å)
Cite:Mechanism of B-box 2 domain-mediated higher-order assembly of the retroviral restriction factor TRIM5 alpha.
Elife, 5, 2016
8FDU
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BU of 8fdu by Molmil
Engineered human dynein motor domain in the microtubule-unbound state with LIS1 complex in the buffer containing ATP-Vi (local refined on AAA3-AAA5 and LIS1)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Cytoplasmic dynein 1 heavy chain 1,Serine--tRNA ligase, Platelet-activating factor acetylhydrolase IB subunit beta,Platelet-activating factor acetylhydrolase IB subunit beta,human LIS1 protein with a SNAP tag
Authors:Ton, W, Wang, Y, Chai, P.
Deposit date:2022-12-04
Release date:2023-06-21
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Microtubule-binding-induced allostery triggers LIS1 dissociation from dynein prior to cargo transport.
Nat.Struct.Mol.Biol., 30, 2023
8FCY
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BU of 8fcy by Molmil
Engineered human dynein motor domain in microtubule-bound state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cytoplasmic dynein 1 heavy chain 1,Serine--tRNA ligase
Authors:Ton, W, Wang, Y, Chai, P.
Deposit date:2022-12-01
Release date:2023-06-21
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Microtubule-binding-induced allostery triggers LIS1 dissociation from dynein prior to cargo transport.
Nat.Struct.Mol.Biol., 30, 2023
3WUQ
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BU of 3wuq by Molmil
Structure of the entire stalk region of the dynein motor domain
Descriptor: Cytoplasmic dynein 1 heavy chain 1
Authors:Nishikawa, Y, Oyama, T, Kamiya, N, Kon, T, Toyoshima, Y.Y, Nakamura, H, Kurisu, G.
Deposit date:2014-05-01
Release date:2014-08-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure of the entire stalk region of the Dynein motor domain
J.Mol.Biol., 426, 2014
6RZB
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BU of 6rzb by Molmil
Cryo-EM structure of mouse cytoplasmic dynein-1 microtubule binding domain bound to microtubules
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Lacey, S.E, He, S, Scheres, S.H.W, Carter, A.P.
Deposit date:2019-06-13
Release date:2019-07-10
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Cryo-EM of dynein microtubule-binding domains shows how an axonemal dynein distorts the microtubule.
Elife, 8, 2019
6RZA
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BU of 6rza by Molmil
Cryo-EM structure of the human inner arm dynein DNAH7 microtubule binding domain bound to microtubules
Descriptor: Cytoplasmic dynein 1 heavy chain 1,Dynein heavy chain 7, axonemal,Cytoplasmic dynein 1 heavy chain 1, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Lacey, S.E, He, S, Scheres, S.H.W, Carter, A.P.
Deposit date:2019-06-13
Release date:2019-07-10
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Cryo-EM of dynein microtubule-binding domains shows how an axonemal dynein distorts the microtubule.
Elife, 8, 2019
3J1T
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BU of 3j1t by Molmil
High affinity dynein microtubule binding domain - tubulin complex
Descriptor: Cytoplasmic dynein 1 heavy chain 1, seryl t-RNA synthetase chimera, Tubulin alpha-1B chain, ...
Authors:Redwine, W.B, Hernandez-Lopez, R, Zou, S, Huang, J, Reck-Peterson, S.L, Leschziner, A.E.
Deposit date:2012-06-25
Release date:2012-09-26
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (9.7 Å)
Cite:Structural basis for microtubule binding and release by dynein.
Science, 337, 2012
3J1U
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BU of 3j1u by Molmil
Low affinity dynein microtubule binding domain - tubulin complex
Descriptor: Cytoplasmic dynein 1 heavy chain 1, seryl t-RNA synthetase chimera, Tubulin alpha-1B chain, ...
Authors:Redwine, W.B, Hernandez-Lopez, R, Zou, S, Huang, J, Reck-Peterson, S.L, Leschziner, A.E.
Deposit date:2012-06-25
Release date:2012-09-26
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (9.7 Å)
Cite:Structural basis for microtubule binding and release by dynein.
Science, 337, 2012

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PDB entries from 2024-08-14

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