Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 87 results

3L8W
DownloadVisualize
BU of 3l8w by Molmil
Urate oxidase from aspergillus flavus complexed with xanthin
Descriptor: SODIUM ION, Uricase, XANTHINE, ...
Authors:Prange, T, Gabison, L, Colloc'h, N, Chiadmi, M.
Deposit date:2010-01-04
Release date:2010-06-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1 Å)
Cite:Near-atomic resolution structures of urate oxidase complexed with its substrate and analogues: the protonation state of the ligand.
Acta Crystallogr.,Sect.D, 66, 2010
4N9S
DownloadVisualize
BU of 4n9s by Molmil
High resolution X-RAY STRUCTURE OF URATE OXIDASE IN COMPLEX WITH 8-HYDROXYXANTHINE
Descriptor: 8-hydroxy-3,9-dihydro-1H-purine-2,6-dione, CHLORIDE ION, GLYCEROL, ...
Authors:Oksanen, E, Blakeley, M.P, Budayova-Spano, M.
Deposit date:2013-10-21
Release date:2014-02-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:The neutron structure of urate oxidase resolves a long-standing mechanistic conundrum and reveals unexpected changes in protonation.
Plos One, 9, 2014
4POE
DownloadVisualize
BU of 4poe by Molmil
Urate oxidase co-crystallized with uric acid and azide
Descriptor: AZIDE ION, SODIUM ION, Uricase
Authors:Colloc'h, N, Prange, T.
Deposit date:2014-02-25
Release date:2014-12-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.07 Å)
Cite:Azide inhibition of urate oxidase.
Acta Crystallogr.,Sect.F, 70, 2014
6IC1
DownloadVisualize
BU of 6ic1 by Molmil
urate oxidase under 90 bar of krypton
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 8-AZAXANTHINE, ACETATE ION, ...
Authors:Prange, T, Colloc'h, N, Carpentier, P.
Deposit date:2018-12-01
Release date:2019-12-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Comparative study of the effects of high hydrostatic pressure per se and high argon pressure on urate oxidase ligand stabilization
Acta Cryst. D, 78, 2022
4N9V
DownloadVisualize
BU of 4n9v by Molmil
High resolution x-ray structure of urate oxidase in complex with 8-azaxanthine
Descriptor: 8-AZAXANTHINE, CHLORIDE ION, GLYCEROL, ...
Authors:Oksanen, E, Blakeley, M.P, Budayova-Spano, M.
Deposit date:2013-10-21
Release date:2014-02-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:The neutron structure of urate oxidase resolves a long-standing mechanistic conundrum and reveals unexpected changes in protonation.
Plos One, 9, 2014
4PR8
DownloadVisualize
BU of 4pr8 by Molmil
URATE OXIDASE AZIDE URIC ACID TERNARY complex
Descriptor: AZIDE ION, SODIUM ION, URIC ACID, ...
Authors:Colloc'h, N, Prange, T.
Deposit date:2014-03-05
Release date:2014-12-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:Azide inhibition of urate oxidase.
Acta Crystallogr.,Sect.F, 70, 2014
4CW6
DownloadVisualize
BU of 4cw6 by Molmil
Crystal structure of cofactor-free urate oxidase in complex with the 5-peroxo derivative of 9-metyl uric acid (X-ray dose, 92 kGy)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, (5S)-5-(dioxidanyl)-9-methyl-7H-purine-2,6,8-trione, 9-METHYL URIC ACID, ...
Authors:Bui, S, Steiner, R.A.
Deposit date:2014-04-01
Release date:2014-10-29
Last modified:2018-02-21
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Direct evidence for a peroxide intermediate and a reactive enzyme-substrate-dioxygen configuration in a cofactor-free oxidase.
Angew. Chem. Int. Ed. Engl., 53, 2014
4OQC
DownloadVisualize
BU of 4oqc by Molmil
Urate OXIDASE CO-CRYSTALLIZED WITH AZIDE
Descriptor: AZIDE ION, SODIUM ION, Uricase
Authors:Colloc'h, N, Prange, T.
Deposit date:2014-02-08
Release date:2014-12-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Azide inhibition of urate oxidase.
Acta Crystallogr.,Sect.F, 70, 2014
4D13
DownloadVisualize
BU of 4d13 by Molmil
Crystal structure of cofactor-free urate oxidase in complex with its 5-peroxoisourate intermediate (X-ray dose, 2.2 kGy)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 5-(HYDRO)PEROXOISOURATE, URICASE
Authors:Bui, S, Steiner, R.A.
Deposit date:2014-05-01
Release date:2014-10-29
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Direct evidence for a peroxide intermediate and a reactive enzyme-substrate-dioxygen configuration in a cofactor-free oxidase.
Angew. Chem. Int. Ed. Engl., 53, 2014
4D17
DownloadVisualize
BU of 4d17 by Molmil
Crystal structure of cofactor-free urate oxidase in complex with its 5-peroxoisourate intermediate (X-ray dose, 106 kGy)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 5-(HYDRO)PEROXOISOURATE, OXYGEN MOLECULE, ...
Authors:Bui, S, Steiner, R.A.
Deposit date:2014-05-01
Release date:2014-11-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Direct evidence for a peroxide intermediate and a reactive enzyme-substrate-dioxygen configuration in a cofactor-free oxidase.
Angew. Chem. Int. Ed. Engl., 53, 2014
4PUV
DownloadVisualize
BU of 4puv by Molmil
URATE OXIDASE DI-AZIDE complex
Descriptor: AZIDE ION, SODIUM ION, Uricase
Authors:Colloc'h, N, Prange, T.
Deposit date:2014-03-14
Release date:2014-12-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Azide inhibition of urate oxidase.
Acta Crystallogr.,Sect.F, 70, 2014
4CW2
DownloadVisualize
BU of 4cw2 by Molmil
Crystal structure of cofactor-free urate oxidase in complex with the 5-peroxo derivative of 9-metyl uric acid (X-ray dose, 2.5 kGy)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, (5S)-5-(dioxidanyl)-9-methyl-7H-purine-2,6,8-trione, URICASE
Authors:Bui, S, Steiner, R.A.
Deposit date:2014-04-01
Release date:2014-10-29
Last modified:2018-02-21
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Direct evidence for a peroxide intermediate and a reactive enzyme-substrate-dioxygen configuration in a cofactor-free oxidase.
Angew. Chem. Int. Ed. Engl., 53, 2014
7A0L
DownloadVisualize
BU of 7a0l by Molmil
Joint neutron/X-ray room temperature structure of perdeuterated Aspergillus flavus urate oxidase in complex with the 8-azaxanthine inhibitor and catalytic water bound in the peroxo hole
Descriptor: 8-AZAXANTHINE, SODIUM ION, Uricase
Authors:McGregor, L, Bui, S, Blakeley, M.P, Steiner, R.A.
Deposit date:2020-08-09
Release date:2020-12-09
Last modified:2024-05-01
Method:NEUTRON DIFFRACTION (1.33 Å), X-RAY DIFFRACTION
Cite:Joint neutron/X-ray crystal structure of a mechanistically relevant complex of perdeuterated urate oxidase and simulations provide insight into the hydration step of catalysis.
Iucrj, 8, 2021
4CW3
DownloadVisualize
BU of 4cw3 by Molmil
Crystal structure of cofactor-free urate oxidase in complex with the 5-peroxo derivative of 9-metyl uric acid (X-ray dose, 665 kGy)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, (5S)-5-(dioxidanyl)-9-methyl-7H-purine-2,6,8-trione, 9-METHYL URIC ACID, ...
Authors:Bui, S, Steiner, R.A.
Deposit date:2014-04-01
Release date:2014-10-29
Last modified:2018-02-21
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Direct evidence for a peroxide intermediate and a reactive enzyme-substrate-dioxygen configuration in a cofactor-free oxidase.
Angew. Chem. Int. Ed. Engl., 53, 2014
3LD4
DownloadVisualize
BU of 3ld4 by Molmil
Urate oxidase complexed with 8-nitro xanthine
Descriptor: 1,2-ETHANEDIOL, 8-nitro-3,7-dihydro-1H-purine-2,6-dione, SODIUM ION, ...
Authors:Prange, T, Colloc'h, N, Gabison, L.
Deposit date:2010-01-12
Release date:2010-06-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Near-atomic resolution structures of urate oxidase complexed with its substrate and analogues: the protonation state of the ligand.
Acta Crystallogr.,Sect.D, 66, 2010
4D19
DownloadVisualize
BU of 4d19 by Molmil
Crystal structure of cofactor-free urate oxidase in complex with its 5-peroxoisourate intermediate (X-ray dose, 1.75 MGy)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 5-(HYDRO)PEROXOISOURATE, OXYGEN MOLECULE, ...
Authors:Bui, S, Steiner, R.A.
Deposit date:2014-05-01
Release date:2014-10-29
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Direct evidence for a peroxide intermediate and a reactive enzyme-substrate-dioxygen configuration in a cofactor-free oxidase.
Angew. Chem. Int. Ed. Engl., 53, 2014
4D12
DownloadVisualize
BU of 4d12 by Molmil
Crystal Structure of Cofactor-free Urate Oxidase Anaerobically Complexed with Uric Acid
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, URIC ACID, URICASE
Authors:Bui, S, Steiner, R.A.
Deposit date:2014-05-01
Release date:2014-10-29
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Direct evidence for a peroxide intermediate and a reactive enzyme-substrate-dioxygen configuration in a cofactor-free oxidase.
Angew. Chem. Int. Ed. Engl., 53, 2014
5FRC
DownloadVisualize
BU of 5frc by Molmil
Structure of urate oxidase prepared by the 'soak-and-freeze' method under 42 bar of oxygen pressure
Descriptor: 8-AZAXANTHINE, OXYGEN MOLECULE, SODIUM ION, ...
Authors:Lafumat, B, Mueller-Dieckmann, C, Colloc'h, N, Prange, T, Royant, A, van der Linden, P, Carpentier, P.
Deposit date:2015-12-16
Release date:2016-10-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.443 Å)
Cite:Gas-Sensitive Biological Crystals Processed in Pressurized Oxygen and Krypton Atmospheres: Deciphering Gas Channels in Proteins Using a Novel `Soak-and-Freeze' Methodology.
J.Appl.Crystallogr., 49, 2016
3P9O
DownloadVisualize
BU of 3p9o by Molmil
Aerobic ternary complex of urate oxidase with azide and chloride
Descriptor: AZIDE ION, CHLORIDE ION, SODIUM ION, ...
Authors:Gabison, L, Colloc'H, N, El Hajji, M, Castro, B, Chiadmi, M, Prange, T.
Deposit date:2010-10-18
Release date:2011-08-31
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Azide and Cyanide Show Different Inhibition Modes to Urate Oxidase
To be Published
6RGM
DownloadVisualize
BU of 6rgm by Molmil
urate oxidase under 130 bar of krypton
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 8-AZAXANTHINE, ACETATE ION, ...
Authors:Prange, T, Colloc'h, N, Carpentier, P.
Deposit date:2019-04-17
Release date:2020-05-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Comparative study of the effects of high hydrostatic pressure per se and high argon pressure on urate oxidase ligand stabilization
Acta Cryst. D, 78, 2022
3LBG
DownloadVisualize
BU of 3lbg by Molmil
Urate oxidase complexed with 8-thio xanthine
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 8-thioxo-3,7,8,9-tetrahydro-1H-purine-2,6-dione, ...
Authors:Prange, T, Colloc'h, N, Gabison, L.
Deposit date:2010-01-08
Release date:2010-06-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Near-atomic resolution structures of urate oxidase complexed with its substrate and analogues: the protonation state of the ligand.
Acta Crystallogr.,Sect.D, 66, 2010
4CW0
DownloadVisualize
BU of 4cw0 by Molmil
Crystal structure of cofactor-free urate oxidase anaerobically complexed with 9-methyl uric acid
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 9-METHYL URIC ACID, URICASE
Authors:Bui, S, Steiner, R.A.
Deposit date:2014-03-31
Release date:2014-10-29
Last modified:2018-02-21
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Direct evidence for a peroxide intermediate and a reactive enzyme-substrate-dioxygen configuration in a cofactor-free oxidase.
Angew. Chem. Int. Ed. Engl., 53, 2014
3OBP
DownloadVisualize
BU of 3obp by Molmil
Anaerobic complex of urate oxidase with uric acid
Descriptor: SODIUM ION, URIC ACID, Uricase
Authors:Gabison, L, Chopard, C, Colloc'h, N, El Hajji, M, Castro, B, Chiadmi, M, Prange, T.
Deposit date:2010-08-08
Release date:2011-06-22
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:X-ray, ESR, and quantum mechanics studies unravel a spin well in the cofactor-less urate oxidase.
Proteins, 79, 2011
2IBA
DownloadVisualize
BU of 2iba by Molmil
Urate oxidase from Aspergillus flavus complexed with its inhibitor 8-azaxanthine
Descriptor: 8-AZAXANTHINE, SODIUM ION, Uricase
Authors:Colloc'h, N, Retailleau, P, Sopkova-de Oliveira Santos, J, Prange, T.
Deposit date:2006-09-11
Release date:2007-02-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Protein Crystallography under Xenon and Nitrous Oxide Pressure: Comparison with In Vivo Pharmacology Studies and Implications for the Mechanism of Inhaled Anesthetic Action
Biophys.J., 92, 2007
4OP9
DownloadVisualize
BU of 4op9 by Molmil
Urate OXIDASE IN COMPLEX WITH 8-AZAXANTHINE
Descriptor: 8-AZAXANTHINE, SODIUM ION, Uricase
Authors:Colloc'h, N, Prange, T.
Deposit date:2014-02-05
Release date:2014-03-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Functional relevance of the internal hydrophobic cavity of urate oxidase.
Febs Lett., 588, 2014

 

1234>

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon