Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 199 results

3A2X
DownloadVisualize
BU of 3a2x by Molmil
Peroxiredoxin (C50S) from Aeropyrum pernix K1 (acetate-bound form)
Descriptor: ACETATE ION, Probable peroxiredoxin
Authors:Nakamura, T, Kado, Y, Yamaguchi, F, Matsumura, H, Ishikawa, K, Inoue, T.
Deposit date:2009-06-04
Release date:2009-10-27
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of peroxiredoxin from Aeropyrum pernix K1 complexed with its substrate, hydrogen peroxide
J.Biochem., 147, 2010
3EMP
DownloadVisualize
BU of 3emp by Molmil
Crystal Structure of the S-acetanilide modified form of C165S AhpC
Descriptor: Alkyl hydroperoxide reductase subunit C
Authors:Karplus, P.A, Hall, A.
Deposit date:2008-09-24
Release date:2009-03-03
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (4 Å)
Cite:Cysteine pK(a) Values for the Bacterial Peroxiredoxin AhpC
Biochemistry, 47, 2008
5CYY
DownloadVisualize
BU of 5cyy by Molmil
Structure of the C-terminal domains of DipZ from Mycobacterium tuberculosis
Descriptor: Protein DipZ
Authors:Goldstone, D.C, Metcalf, P, Baker, E.N, Mycobacterium Tuberculosis Structural Proteomics Project (XMTB)
Deposit date:2015-07-31
Release date:2016-01-13
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the ectodomain of the electron transporter Rv2874 from Mycobacterium tuberculosis reveals a thioredoxin-like domain combined with a carbohydrate-binding module.
Acta Crystallogr D Struct Biol, 72, 2016
6KHX
DownloadVisualize
BU of 6khx by Molmil
Crystal structure of Prx from Akkermansia muciniphila
Descriptor: CALCIUM ION, Peroxiredoxin
Authors:Li, M, Wang, J, Xu, W, Wang, Y, Zhang, M, Wang, M.
Deposit date:2019-07-16
Release date:2020-02-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Crystal structure of Akkermansia muciniphila peroxiredoxin reveals a novel regulatory mechanism of typical 2-Cys Prxs by a distinct loop.
Febs Lett., 594, 2020
6KRP
DownloadVisualize
BU of 6krp by Molmil
Peroxiredoxin from Aeropyrum pernix K1 (ApPrx) 0Cys W88A mutant
Descriptor: CITRIC ACID, Peroxiredoxin
Authors:Himiyama, T, Nakamura, T.
Deposit date:2019-08-22
Release date:2020-07-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Disassembly of the ring-type decameric structure of peroxiredoxin from Aeropyrum pernix K1 by amino acid mutation.
Protein Sci., 29, 2020
6KRQ
DownloadVisualize
BU of 6krq by Molmil
Peroxiredoxin from Aeropyrum pernix K1 (ApPrx) 0Cys F80A mutant
Descriptor: CITRIC ACID, Peroxiredoxin
Authors:Himiyama, T, Nakamura, T.
Deposit date:2019-08-22
Release date:2020-07-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Disassembly of the ring-type decameric structure of peroxiredoxin from Aeropyrum pernix K1 by amino acid mutation.
Protein Sci., 29, 2020
6KRK
DownloadVisualize
BU of 6krk by Molmil
Peroxiredoxin from Aeropyrum pernix K1 (ApPrx) 0Cys mutant
Descriptor: CITRIC ACID, Peroxiredoxin
Authors:Himiyama, T, Nakamura, T.
Deposit date:2019-08-22
Release date:2020-07-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Disassembly of the ring-type decameric structure of peroxiredoxin from Aeropyrum pernix K1 by amino acid mutation.
Protein Sci., 29, 2020
6KRR
DownloadVisualize
BU of 6krr by Molmil
Peroxiredoxin from Aeropyrum pernix K1 (ApPrx) 0Cys W210A mutant
Descriptor: Peroxiredoxin
Authors:Himiyama, T, Nakamura, T.
Deposit date:2019-08-22
Release date:2020-07-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Disassembly of the ring-type decameric structure of peroxiredoxin from Aeropyrum pernix K1 by amino acid mutation.
Protein Sci., 29, 2020
6KRM
DownloadVisualize
BU of 6krm by Molmil
Peroxiredoxin from Aeropyrum pernix K1 (ApPrx) 0Cys F46A mutant
Descriptor: CITRIC ACID, Peroxiredoxin
Authors:Himiyama, T, Nakamura, T.
Deposit date:2019-08-22
Release date:2020-07-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Disassembly of the ring-type decameric structure of peroxiredoxin from Aeropyrum pernix K1 by amino acid mutation.
Protein Sci., 29, 2020
6KRS
DownloadVisualize
BU of 6krs by Molmil
Peroxiredoxin from Aeropyrum pernix K1 (ApPrx) 0Cys W211A mutant
Descriptor: CITRIC ACID, Peroxiredoxin
Authors:Himiyama, T, Nakamura, T.
Deposit date:2019-08-22
Release date:2020-07-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Disassembly of the ring-type decameric structure of peroxiredoxin from Aeropyrum pernix K1 by amino acid mutation.
Protein Sci., 29, 2020
5DVB
DownloadVisualize
BU of 5dvb by Molmil
Crystal Structure of S. cerevisiae TSA2
Descriptor: Tsa2p
Authors:Nielsen, M.H, Kidmose, R.T, Jenner, L.B.
Deposit date:2015-09-21
Release date:2016-01-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of TSA2 reveals novel features of the active-site loop of peroxiredoxins.
Acta Crystallogr D Struct Biol, 72, 2016
5EPT
DownloadVisualize
BU of 5ept by Molmil
Crystal Structure of S. cerevisiae TSA2 in the disulfide state
Descriptor: Peroxiredoxin TSA2
Authors:Nielsen, M.H, Kidmose, R.T, Jenner, L.B.
Deposit date:2015-11-12
Release date:2016-01-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (5 Å)
Cite:Structure of TSA2 reveals novel features of the active-site loop of peroxiredoxins.
Acta Crystallogr D Struct Biol, 72, 2016
5B8B
DownloadVisualize
BU of 5b8b by Molmil
Crystal structure of reduced chimeric E.coli AhpC1-186-YFSKHN
Descriptor: Alkyl hydroperoxide reductase subunit C,Peroxiredoxin-2, SULFATE ION
Authors:Kamariah, N, Sek, M.F, Eisenhaber, B, Eisenhaber, F, Gruber, G.
Deposit date:2016-06-14
Release date:2017-02-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Transition steps in peroxide reduction and a molecular switch for peroxide robustness of prokaryotic peroxiredoxins.
Sci Rep, 6, 2016
1X0R
DownloadVisualize
BU of 1x0r by Molmil
Thioredoxin Peroxidase from Aeropyrum pernix K1
Descriptor: 1,2-ETHANEDIOL, Probable peroxiredoxin
Authors:Nakamura, T, Yamamoto, T, Inoue, T, Matsumura, H, Kobayashi, A, Hagihara, Y, Uegaki, K, Ataka, M, Kai, Y, Ishikawa, K.
Deposit date:2005-03-28
Release date:2005-12-20
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of thioredoxin peroxidase from aerobic hyperthermophilic archaeon Aeropyrum pernix K1
Proteins, 62, 2006
1WE0
DownloadVisualize
BU of 1we0 by Molmil
Crystal structure of peroxiredoxin (AhpC) from Amphibacillus xylanus
Descriptor: AMMONIUM ION, alkyl hydroperoxide reductase C
Authors:Kitano, K, Kita, A, Hakoshima, T, Niimura, Y, Miki, K.
Deposit date:2004-05-21
Release date:2005-03-29
Last modified:2018-02-07
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of decameric peroxiredoxin (AhpC) from Amphibacillus xylanus
Proteins, 59, 2005
2ZCT
DownloadVisualize
BU of 2zct by Molmil
Oxidation of archaeal peroxiredoxin involves a hypervalent sulfur intermediate
Descriptor: Probable peroxiredoxin
Authors:Nakamura, T, Hagihara, Y, Abe, M, Inoue, T, Yamamoto, T, Matsumura, H.
Deposit date:2007-11-12
Release date:2008-05-27
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Oxidation of archaeal peroxiredoxin involves a hypervalent sulfur intermediate
Proc.Natl.Acad.Sci.Usa, 105, 2008
1XCC
DownloadVisualize
BU of 1xcc by Molmil
1-Cys peroxidoxin from Plasmodium Yoelli
Descriptor: 1-Cys peroxiredoxin
Authors:Vedadi, M, Sharma, S, Houston, S, Lew, J, Wasney, G, Amani, M, Xu, X, Bray, J, Sundstrom, M, Arrowsmith, C, Edwards, A, Hui, R, Bochkarev, A, Structural Genomics Consortium (SGC)
Deposit date:2004-09-01
Release date:2004-11-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Genome-scale protein expression and structural biology of Plasmodium falciparum and related Apicomplexan organisms.
Mol.Biochem.Parasitol., 151, 2007
3A2W
DownloadVisualize
BU of 3a2w by Molmil
Peroxiredoxin (C50S) from Aeropytum pernix K1 (peroxide-bound form)
Descriptor: GLYCEROL, PEROXIDE ION, Probable peroxiredoxin
Authors:Nakamura, T, Kado, Y, Yamaguchi, F, Matsumura, H, Ishikawa, K, Inoue, T.
Deposit date:2009-06-04
Release date:2009-10-27
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of peroxiredoxin from Aeropyrum pernix K1 complexed with its substrate, hydrogen peroxide
J.Biochem., 147, 2010
3A2V
DownloadVisualize
BU of 3a2v by Molmil
Peroxiredoxin (C207S) from Aeropyrum pernix K1 complexed with hydrogen peroxide
Descriptor: PEROXIDE ION, Probable peroxiredoxin
Authors:Nakamura, T, Kado, Y, Yamaguchi, F, Ishikawa, K, Matsumura, H, Inoue, T.
Deposit date:2009-06-04
Release date:2009-10-27
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of peroxiredoxin from Aeropyrum pernix K1 complexed with its substrate, hydrogen peroxide
J.Biochem., 147, 2010
3A5W
DownloadVisualize
BU of 3a5w by Molmil
Peroxiredoxin (wild type) from Aeropyrum pernix K1 (reduced form)
Descriptor: Probable peroxiredoxin
Authors:Nakamura, T, Kado, Y, Yamaguchi, T, Matsumura, H, Ishikawa, K, Inoue, T.
Deposit date:2009-08-12
Release date:2009-10-27
Last modified:2014-01-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of peroxiredoxin from Aeropyrum pernix K1 complexed with its substrate, hydrogen peroxide
J.Biochem., 147, 2010
2Z9S
DownloadVisualize
BU of 2z9s by Molmil
Crystal Structure Analysis of rat HBP23/Peroxiredoxin I, Cys52Ser mutant
Descriptor: Peroxiredoxin-1
Authors:Matsumura, T, Okamoto, K, Nishino, T, Abe, Y.
Deposit date:2007-09-25
Release date:2007-11-20
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Dimer-Oligomer Interconversion of Wild-type and Mutant Rat 2-Cys Peroxiredoxin: DISULFIDE FORMATION AT DIMER-DIMER INTERFACES IS NOT ESSENTIAL FOR DECAMERIZATION
J.Biol.Chem., 283, 2008
1YF1
DownloadVisualize
BU of 1yf1 by Molmil
Structural and biochemical analysis of the link between enzymatic activity and oligomerization in AhpC, a bacterial peroxiredoxin.
Descriptor: Alkyl hydroperoxide reductase subunit C, SODIUM ION
Authors:Parsonage, D, Youngblood, D.S, Sarma, G.N, Wood, Z.A, Karplus, P.A, Poole, L.B.
Deposit date:2004-12-29
Release date:2005-08-16
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Analysis of the Link between Enzymatic Activity and Oligomeric State in AhpC, a Bacterial Peroxiredoxin.
Biochemistry, 44, 2005
1YEX
DownloadVisualize
BU of 1yex by Molmil
Structural and biochemical analysis of the link between enzymatic activity and oligomerization in AhpC, a bacterial peroxiredoxin.
Descriptor: Alkyl hydroperoxide reductase subunit C, SULFATE ION
Authors:Parsonage, D, Youngblood, D.S, Sarma, G.N, Wood, Z.A, Karplus, P.A, Poole, L.B.
Deposit date:2004-12-28
Release date:2005-08-16
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Analysis of the Link between Enzymatic Activity and Oligomeric State in AhpC, a Bacterial Peroxiredoxin.
Biochemistry, 44, 2005
1YEP
DownloadVisualize
BU of 1yep by Molmil
Structural and biochemical analysis of the link between enzymatic activity and olgomerization in AhpC, a bacterial peroxiredoxin.
Descriptor: Alkyl hydroperoxide reductase subunit C, SULFATE ION
Authors:Parsonage, D, Youngblood, D.S, Sarma, G.N, Wood, Z.A, Karplus, P.A, Poole, L.B.
Deposit date:2004-12-28
Release date:2005-08-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Analysis of the Link between Enzymatic Activity and Oligomeric State in AhpC, a Bacterial Peroxiredoxin.
Biochemistry, 44, 2005
4XRA
DownloadVisualize
BU of 4xra by Molmil
Salmonella typhimurium AhpC T43S mutant
Descriptor: Alkyl hydroperoxide reductase subunit C, CHLORIDE ION, POTASSIUM ION, ...
Authors:Perkins, A, Brereton, A.E, Nelson, K, Parsonage, D, Poole, L, Karplus, P.A.
Deposit date:2015-01-20
Release date:2016-01-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Experimentally Dissecting the Origins of Peroxiredoxin Catalysis.
Antioxid.Redox Signal., 28, 2018

221716

PDB entries from 2024-06-26

PDB statisticsPDBj update infoContact PDBjnumon