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PDB: 108 results

7RV1
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BU of 7rv1 by Molmil
Crystal structure of the BCL6 BTB domain in complex with OICR-8826
Descriptor: (E)-3-(7-(2-((3-chloropyridin-4-yl)amino)-2-oxoethyl)-3-(3-(1-methyl-1H-pyrazol-4-yl)prop-2-yn-1-yl)-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-5-yl)acrylamide, B-cell lymphoma 6 protein, DIMETHYL SULFOXIDE, ...
Authors:Kuntz, D.A, Prive, G.G.
Deposit date:2021-08-18
Release date:2022-11-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Crystal structure of the BCL6 BTB domain in complex with OICR-8826
To Be Published
7LWE
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BU of 7lwe by Molmil
Crystal structure of the BCL6 BTB domain in complex with OICR-7629
Descriptor: ACETATE ION, B-cell lymphoma 6 protein, CHLORIDE ION, ...
Authors:Kuntz, D.A, Prive, G.G.
Deposit date:2021-03-01
Release date:2022-03-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Discovery of OICR12694: A Novel, Potent, Selective, and Orally Bioavailable BCL6 BTB Inhibitor.
Acs Med.Chem.Lett., 14, 2023
7OKL
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BU of 7okl by Molmil
Crystal structure of human BCL6 BTB domain in complex with compound 13e
Descriptor: 1,2-ETHANEDIOL, 2-chloranyl-4-[[1-methyl-2-oxidanylidene-4-[[(1R)-1-pyrimidin-2-ylethyl]amino]quinolin-6-yl]amino]pyridine-3-carbonitrile, ALA-TRP-VAL-ILE-PRO-ALA, ...
Authors:Rodrigues, M.J, Le Bihan, Y.-V, van Montfort, R.L.M.
Deposit date:2021-05-17
Release date:2021-12-08
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Into Deep Water: Optimizing BCL6 Inhibitors by Growing into a Solvated Pocket.
J.Med.Chem., 64, 2021
7LWF
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BU of 7lwf by Molmil
Crystal structure of the BCL6 BTB domain in complex with OICR-9320
Descriptor: B-cell lymphoma 6 protein, GLYCEROL, N-(3-chloropyridin-4-yl)-2-[5-(3-cyano-4-hydroxyphenyl)-3-methyl-4-oxo-3,4-dihydro-7H-pyrrolo[2,3-d]pyrimidin-7-yl]acetamide
Authors:Kuntz, D.A, Prive, G.G.
Deposit date:2021-03-01
Release date:2022-03-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Discovery of OICR12694: A Novel, Potent, Selective, and Orally Bioavailable BCL6 BTB Inhibitor.
Acs Med.Chem.Lett., 14, 2023
7RV4
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BU of 7rv4 by Molmil
Crystal structure of the BCL6 BTB domain in complex with OICR-9153
Descriptor: CHLORIDE ION, DIMETHYL SULFOXIDE, Isoform 2 of B-cell lymphoma 6 protein, ...
Authors:Kuntz, D.A, Prive, G.G.
Deposit date:2021-08-18
Release date:2022-08-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structure of the BCL6 BTB domain
To Be Published
7RV8
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BU of 7rv8 by Molmil
Crystal structure of the BCL6 BTB domain in complex with OICR-10268
Descriptor: DIMETHYL SULFOXIDE, Isoform 2 of B-cell lymphoma 6 protein, N-[5-chloro-2-(morpholin-4-yl)pyridin-4-yl]-2-{5-(3-cyano-4-hydroxy-5-methylphenyl)-3-[3-(1-methyl-1H-pyrazol-4-yl)prop-2-yn-1-yl]-4-oxo-3,4-dihydro-7H-pyrrolo[2,3-d]pyrimidin-7-yl}acetamide
Authors:Kuntz, D.A, Prive, G.G.
Deposit date:2021-08-18
Release date:2022-08-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structure of the BCL6 BTB domain
To Be Published
7RUY
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BU of 7ruy by Molmil
Crystal structure of the BCL6 BTB domain in complex with OICR-8388
Descriptor: B-cell lymphoma 6 protein, FORMIC ACID, N-(3-chloropyridin-4-yl)-2-(2-{[(2,4-dimethoxyphenyl)methyl]amino}-4-oxo-3,4-dihydro-7H-pyrrolo[2,3-d]pyrimidin-7-yl)acetamide
Authors:Kuntz, D.A, Prive, G.G.
Deposit date:2021-08-18
Release date:2022-11-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Crystal structure of the BCL6 BTB domain in complex with OICR-8388
To Be Published
7RV2
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BU of 7rv2 by Molmil
Crystal structure of the BCL6 BTB domain in complex with OICR-8828
Descriptor: B-cell lymphoma 6 protein, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Kuntz, D.A, Prive, G.G.
Deposit date:2021-08-18
Release date:2022-11-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Crystal structure of the BCL6 BTB domain in complex with OICR-8828
To Be Published
7RUX
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BU of 7rux by Molmil
Crystal structure of the BCL6 BTB domain in complex with OICR-8311
Descriptor: B-cell lymphoma 6 protein, FORMIC ACID, N-(3-chloropyridin-4-yl)-2-(3-(cyclopropylmethyl)-4-oxo-3,4-dihydro-7H-pyrrolo[2,3-d]pyrimidin-7-yl)acetamide
Authors:Kuntz, D.A, Prive, G.G.
Deposit date:2021-08-18
Release date:2022-11-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of the BCL6 BTB domain in complex with OICR-8311
To Be Published
7RUW
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BU of 7ruw by Molmil
Crystal structure of the BCL6 BTB domain in complex with OICR-7859
Descriptor: 2-(2-amino-4-oxo-3,4-dihydro-7H-pyrrolo[2,3-d]pyrimidin-7-yl)-N-(3-chloropyridin-4-yl)acetamide, B-cell lymphoma 6 protein, CHLORIDE ION, ...
Authors:Kuntz, D.A, Prive, G.G.
Deposit date:2021-08-18
Release date:2022-11-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of the BCL6 BTB domain in complex with OICR-7859
To Be Published
7LWG
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BU of 7lwg by Molmil
Crystal structure of the BCL6 BTB domain in complex with OICR-12694
Descriptor: 5-{(5S)-1-[2-({3-chloro-6-[(2S)-2,4-dimethylpiperazin-1-yl]-2-fluoropyridin-4-yl}amino)-2-oxoethyl]-4-oxo-4,6,7,8-tetrahydro-1H-dipyrrolo[1,2-a:2',3'-d]pyrimidin-3-yl}-3,4-difluoro-2-hydroxybenzamide, B-cell lymphoma 6 protein, GLYCEROL, ...
Authors:Kuntz, D.A, Prive, G.G.
Deposit date:2021-03-01
Release date:2022-03-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Discovery of OICR12694: A Novel, Potent, Selective, and Orally Bioavailable BCL6 BTB Inhibitor.
Acs Med.Chem.Lett., 14, 2023
1R29
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BU of 1r29 by Molmil
Crystal Structure of the B-Cell Lymphoma 6 (BCL6) BTB Domain to 1.3 Angstrom
Descriptor: B-cell lymphoma 6 protein
Authors:Ahmad, K.F, Melnick, A, Lax, S.A, Bouchard, D, Liu, J, Kiang, C.L, Mayer, S, Licht, J.D, Prive, G.G.
Deposit date:2003-09-26
Release date:2003-12-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Mechanism of SMRT corepressor recruitment by the BCL6 BTB domain.
Mol.Cell, 12, 2003
7OKG
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BU of 7okg by Molmil
Crystal structure of human BCL6 BTB domain in complex with compound 8e
Descriptor: 1,2-ETHANEDIOL, 2-chloranyl-4-[[4-(1-methylpyrazol-4-yl)-2-oxidanylidene-1H-quinolin-6-yl]amino]pyridine-3-carbonitrile, ALA-TRP-VAL-ILE-PRO-ALA, ...
Authors:Collie, G.W, Le Bihan, Y.-V, van Montfort, R.L.M.
Deposit date:2021-05-17
Release date:2021-12-08
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Into Deep Water: Optimizing BCL6 Inhibitors by Growing into a Solvated Pocket.
J.Med.Chem., 64, 2021
7LZR
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BU of 7lzr by Molmil
Crystal structure of the BCL6 BTB domain in complex with OICR-10256
Descriptor: B-cell lymphoma 6 protein, CHLORIDE ION, GLYCEROL, ...
Authors:Kuntz, D.A, Prive, G.G.
Deposit date:2021-03-10
Release date:2022-03-16
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Crystal structure of the BCL6 BTB domain in complex with OICR-10256
To Be Published
7RV3
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BU of 7rv3 by Molmil
Crystal structure of the BCL6 BTB domain in complex with OICR-9124
Descriptor: CHLORIDE ION, Isoform 2 of B-cell lymphoma 6 protein, N-(3-chloropyridin-4-yl)-2-[2-(morpholin-4-yl)-4-oxo-3,4-dihydro-7H-pyrrolo[2,3-d]pyrimidin-7-yl]acetamide, ...
Authors:Kuntz, D.A, Prive, G.G.
Deposit date:2021-08-18
Release date:2022-08-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structure of the BCL6 BTB domain
To Be Published
7ZWX
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BU of 7zwx by Molmil
Crystal structure of human BCL6 BTB domain in complex with compound 19
Descriptor: 1,2-ETHANEDIOL, 6-[1,3-benzodioxol-5-ylmethyl(methyl)amino]-1-~{tert}-butyl-5~{H}-pyrazolo[3,4-d]pyrimidin-4-one, ALA-TRP-VAL-ILE-PRO-ALA, ...
Authors:Collie, G.W, Le Bihan, Y.-V, van Montfort, R.L.M.
Deposit date:2022-05-19
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Discovering cell-active BCL6 inhibitors: effectively combining biochemical HTS with multiple biophysical techniques, X-ray crystallography and cell-based assays.
Sci Rep, 12, 2022
5N20
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BU of 5n20 by Molmil
Crystal structure of the BCL6 BTB domain in complex with pyrazolo-pyrimidine ligand
Descriptor: B-cell lymphoma 6 protein, ~{N}-[5-[[3-cyano-7-(cyclopropylamino)pyrazolo[1,5-a]pyrimidin-5-yl]amino]-2-[(3~{R})-3-(dimethylamino)pyrrolidin-1-yl]phenyl]ethanamide
Authors:Robb, G, Ferguson, A, Hargreaves, D.
Deposit date:2017-02-06
Release date:2017-05-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Discovery of Pyrazolo[1,5-a]pyrimidine B-Cell Lymphoma 6 (BCL6) Binders and Optimization to High Affinity Macrocyclic Inhibitors.
J. Med. Chem., 60, 2017
7ZWO
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BU of 7zwo by Molmil
Crystal structure of human BCL6 BTB domain in complex with compound 2
Descriptor: (5~{S},7~{R})-5-(4-chlorophenyl)-7-(2,3,4-trimethoxyphenyl)-4,5,6,7-tetrahydro-[1,2,4]triazolo[1,5-a]pyrimidine, 1,2-ETHANEDIOL, ALA-TRP-VAL-ILE-PRO-ALA, ...
Authors:Collie, G.W, Le Bihan, Y.-V, van Montfort, R.L.M.
Deposit date:2022-05-19
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Discovering cell-active BCL6 inhibitors: effectively combining biochemical HTS with multiple biophysical techniques, X-ray crystallography and cell-based assays.
Sci Rep, 12, 2022
6EW6
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BU of 6ew6 by Molmil
Crystal structure of the BCL6 BTB domain in complex with anilinopyrimidine ligand
Descriptor: B-cell lymphoma 6 protein, ~{N}2-(2-chlorophenyl)-1,3,5-triazine-2,4-diamine
Authors:Robb, G, Ferguson, A, Hargreaves, D.
Deposit date:2017-11-03
Release date:2018-10-24
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Development of a Novel B-Cell Lymphoma 6 (BCL6) PROTAC To Provide Insight into Small Molecule Targeting of BCL6.
ACS Chem. Biol., 13, 2018
6XZZ
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BU of 6xzz by Molmil
Crystal structure of the BCL6 BTB domain in complex with the NCoR1 BBD2 peptide
Descriptor: B-cell lymphoma 6 protein, CHLORIDE ION, Nuclear receptor corepressor 1, ...
Authors:Zacharchenko, T, Wright, S.C.
Deposit date:2020-02-05
Release date:2020-12-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Functionalization of the BCL6 BTB domain into a noncovalent crystallization chaperone.
Iucrj, 8, 2021
7ZWZ
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BU of 7zwz by Molmil
Crystal structure of human BCL6 BTB domain in complex with compound 22
Descriptor: 1,2-ETHANEDIOL, ALA-TRP-VAL-ILE-PRO-ALA, B-cell lymphoma 6 protein, ...
Authors:Collie, G.W, Le Bihan, Y.-V, van Montfort, R.L.M.
Deposit date:2022-05-19
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Discovering cell-active BCL6 inhibitors: effectively combining biochemical HTS with multiple biophysical techniques, X-ray crystallography and cell-based assays.
Sci Rep, 12, 2022
7OKJ
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BU of 7okj by Molmil
Crystal structure of human BCL6 BTB domain in complex with compound 12c and its enantiomer 12b
Descriptor: (2R)-2-[[6-[(2-chloranyl-3-cyano-pyridin-4-yl)amino]-2-oxidanylidene-1H-quinolin-4-yl]amino]-N-methyl-propanamide, (2S)-2-[[6-[(2-chloranyl-3-cyano-pyridin-4-yl)amino]-2-oxidanylidene-1H-quinolin-4-yl]amino]-N-methyl-propanamide, 1,2-ETHANEDIOL, ...
Authors:Collie, G.W, Le Bihan, Y.-V, van Montfort, R.L.M.
Deposit date:2021-05-17
Release date:2021-12-08
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Into Deep Water: Optimizing BCL6 Inhibitors by Growing into a Solvated Pocket.
J.Med.Chem., 64, 2021
6TOK
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BU of 6tok by Molmil
Crystal structure of human BCL6 BTB domain in complex with compound 23d
Descriptor: 1,2-ETHANEDIOL, 5-[[5-chloranyl-2-(3,5-dimethylpyrazol-1-yl)pyrimidin-4-yl]amino]-1-methyl-3-(3-methyl-3-oxidanyl-butyl)benzimidazol-2-one, ALA-TRP-VAL-ILE-PRO-ALA, ...
Authors:Rodrigues, M.J, Le Bihan, Y.-V, van Montfort, R.L.M.
Deposit date:2019-12-11
Release date:2020-04-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:AchievingIn VivoTarget Depletion through the Discovery and Optimization of Benzimidazolone BCL6 Degraders.
J.Med.Chem., 63, 2020
6XYX
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BU of 6xyx by Molmil
Crystal structure of the BCL6 BTB domain in complex with the NCoR1 BBD corepressor peptide
Descriptor: 1,2-ETHANEDIOL, B-cell lymphoma 6 protein, Nuclear receptor corepressor 1, ...
Authors:Zacharchenko, T, Wright, S.C.
Deposit date:2020-01-31
Release date:2020-12-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Functionalization of the BCL6 BTB domain into a noncovalent crystallization chaperone.
Iucrj, 8, 2021
7Q7S
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BU of 7q7s by Molmil
Crystal structure of human BCL6 BTB domain in complex with compound 4
Descriptor: 1,2-ETHANEDIOL, 2-chloranyl-4-[[4-(ethylamino)-1,3-dimethyl-2-oxidanylidene-quinolin-6-yl]amino]pyridine-3-carbonitrile, ALA-TRP-VAL-ILE-PRO-ALA, ...
Authors:Collie, G.W, Le Bihan, Y.-V, van Montfort, R.L.M.
Deposit date:2021-11-09
Release date:2022-06-15
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Optimizing Shape Complementarity Enables the Discovery of Potent Tricyclic BCL6 Inhibitors.
J.Med.Chem., 65, 2022

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