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PDB: 601 results

4NPD
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BU of 4npd by Molmil
High-resolution structure of C domain of staphylococcal protein A at cryogenic temperature
Descriptor: Immunoglobulin G-binding protein A, THIOCYANATE ION, ZINC ION
Authors:Deis, L.N, Pemble IV, C.W, Oas, T.G, Richardson, J.S, Richardson, D.C.
Deposit date:2013-11-21
Release date:2014-10-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Multiscale conformational heterogeneity in staphylococcal protein a: possible determinant of functional plasticity.
Structure, 22, 2014
8DA5
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BU of 8da5 by Molmil
Coevolved affibody-Z domain pair LL1.c4
Descriptor: GLYCEROL, Immunoglobulin G-binding protein A, affibody LL1.FIVM
Authors:Jude, K.M, Yang, A, Garcia, K.C.
Deposit date:2022-06-13
Release date:2023-07-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1 Å)
Cite:Deploying synthetic coevolution and machine learning to engineer protein-protein interactions.
Science, 381, 2023
8DA7
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BU of 8da7 by Molmil
Coevolved affibody-Z domain pair LL1.c6
Descriptor: Immunoglobulin G-binding protein A, MALONATE ION, affibody LL1.FIFV
Authors:Jude, K.M, Yang, A, Garcia, K.C.
Deposit date:2022-06-13
Release date:2023-07-26
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:Deploying synthetic coevolution and machine learning to engineer protein-protein interactions.
Science, 381, 2023
8DA3
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BU of 8da3 by Molmil
Coevolved affibody-Z domain pair LL1.c1
Descriptor: Affibody LL1.FILF, Immunoglobulin G-binding protein A, MALONATE ION, ...
Authors:Jude, K.M, Yang, A, Garcia, K.C.
Deposit date:2022-06-13
Release date:2023-07-26
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:Deploying synthetic coevolution and machine learning to engineer protein-protein interactions.
Science, 381, 2023
1IGD
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BU of 1igd by Molmil
THE THIRD IGG-BINDING DOMAIN FROM STREPTOCOCCAL PROTEIN G: AN ANALYSIS BY X-RAY CRYSTALLOGRAPHY OF THE STRUCTURE ALONE AND IN A COMPLEX WITH FAB
Descriptor: PROTEIN G
Authors:Derrick, J.P, Wigley, D.B.
Deposit date:1994-08-05
Release date:1994-11-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:The third IgG-binding domain from streptococcal protein G. An analysis by X-ray crystallography of the structure alone and in a complex with Fab.
J.Mol.Biol., 243, 1994
2IGD
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BU of 2igd by Molmil
ANISOTROPIC STRUCTURE OF PROTEIN G IGG-BINDING DOMAIN III AT 1.1 ANGSTROM RESOLUTION
Descriptor: PROTEIN G
Authors:Butterworth, S, Lamzin, V.L, Wigley, D.B, Derrick, J.P, Wilson, K.S.
Deposit date:1997-04-30
Release date:1998-07-29
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Anisotropic Refinement of a Protein G Domain at 1.1 Angstrom Resolution
To be Published
8DAB
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BU of 8dab by Molmil
Coevolved affibody-Z domain pair LL2.c17
Descriptor: Affibody LL2.IVVY, Immunoglobulin G-binding protein A
Authors:Jude, K.M, Yang, A, Garcia, K.C.
Deposit date:2022-06-13
Release date:2023-07-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.134 Å)
Cite:Deploying synthetic coevolution and machine learning to engineer protein-protein interactions.
Science, 381, 2023
8C8F
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BU of 8c8f by Molmil
Crystal structure of the E. coli maltodextrin-binding protein
Descriptor: DI(HYDROXYETHYL)ETHER, Maltose/maltodextrin-binding periplasmic protein
Authors:Marquez Espinoza, A, Rodrigues, M.J, Olieric, V, Freisinger, E.
Deposit date:2023-01-19
Release date:2023-02-22
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Crystal structure of the E. coli maltodextrin-binding protein
To Be Published
8DAC
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BU of 8dac by Molmil
Coevolved affibody-Z domain pair LL2.c22
Descriptor: Affibody LL2.FILV, GLYCEROL, Immunoglobulin G-binding protein A
Authors:Jude, K.M, Yang, A, Garcia, K.C.
Deposit date:2022-06-13
Release date:2023-07-26
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Deploying synthetic coevolution and machine learning to engineer protein-protein interactions.
Science, 381, 2023
6CNE
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BU of 6cne by Molmil
Selenomethionine variant (V29SeM) of protein GB1
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Immunoglobulin G-binding protein G, PHOSPHATE ION
Authors:Chen, Q.
Deposit date:2018-03-08
Release date:2019-07-10
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:77Se NMR Probes the Protein Environment of Selenomethionine.
J.Phys.Chem.B, 124, 2020
3MP9
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BU of 3mp9 by Molmil
Structure of Streptococcal protein G B1 domain at pH 3.0
Descriptor: FORMIC ACID, Immunoglobulin G-binding protein G
Authors:Tomlinson, J.H, Green, V.L, Baker, P.J, Williamson, M.P.
Deposit date:2010-04-26
Release date:2011-02-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural origins of pH-dependent chemical shifts in the B1 domain of protein G.
Proteins, 78, 2010
4EXK
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BU of 4exk by Molmil
A chimera protein containing MBP fused to the C-terminal domain of the uncharacterized protein STM14_2015 from Salmonella enterica
Descriptor: Maltose-binding periplasmic protein, uncharacterized protein chimera, TRIETHYLENE GLYCOL, ...
Authors:Nocek, B, Hatzos-Skintges, C, Jedrzejczak, R, Babnigg, G, Brown, R.N, Cort, J.R, Heffron, F, Nakayasu, E.S, Adkins, J.N, Joachimiak, A, Program for the Characterization of Secreted Effector Proteins (PCSEP), Midwest Center for Structural Genomics (MCSG)
Deposit date:2012-04-30
Release date:2012-08-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:A chimera protein containing MBP fused to the C-terminal domain of the uncharacterized protein STM14_2015 form Salmonella enterica
To be Published
8DA8
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BU of 8da8 by Molmil
Coevolved affibody-Z domain pair LL2.c1
Descriptor: Affibody LL2.FIIK, GLYCEROL, Immunoglobulin G-binding protein A
Authors:Jude, K.M, Yang, A, Garcia, K.C.
Deposit date:2022-06-13
Release date:2023-07-26
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Deploying synthetic coevolution and machine learning to engineer protein-protein interactions.
Science, 381, 2023
3Q27
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BU of 3q27 by Molmil
Cyrstal structure of human alpha-synuclein (32-57) fused to maltose binding protein (MBP)
Descriptor: GLYCEROL, Maltose-binding periplasmic protein/alpha-synuclein chimeric protein, SULFATE ION, ...
Authors:Zhao, M, Sawaya, M.R, Cascio, D, Eisenberg, D.
Deposit date:2010-12-19
Release date:2011-06-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.302 Å)
Cite:Structures of segments of alpha-synuclein fused to maltose-binding protein suggest intermediate states during amyloid formation
Protein Sci., 20, 2011
7KD4
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BU of 7kd4 by Molmil
Structure of the C-terminal domain of the Menangle virus phosphoprotein (residues 329 -388), fused to MBP. Space group P21.
Descriptor: Maltodextrin-binding protein and Phosphoprotein fusion protein, SULFATE ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Webby, M.N, Kingston, R.L.
Deposit date:2020-10-08
Release date:2021-09-15
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.312 Å)
Cite:Structural Analysis of the Menangle Virus P Protein Reveals a Soft Boundary between Ordered and Disordered Regions.
Viruses, 13, 2021
8DA9
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BU of 8da9 by Molmil
Coevolved affibody-Z domain pair LL2.c3
Descriptor: Affibody LL2.FIIV, GLYCEROL, Immunoglobulin G-binding protein A, ...
Authors:Jude, K.M, Yang, A, Garcia, K.C.
Deposit date:2022-06-13
Release date:2023-07-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Deploying synthetic coevolution and machine learning to engineer protein-protein interactions.
Science, 381, 2023
5M13
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BU of 5m13 by Molmil
Synthetic nanobody in complex with MBP
Descriptor: 1,2-ETHANEDIOL, Maltose-binding periplasmic protein, synthetic Nanobody L2_C06 (a-MBP#2)
Authors:Zimmermann, I, Egloff, P, Seeger, M.A.
Deposit date:2016-10-07
Release date:2017-11-15
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (1.372 Å)
Cite:Synthetic single domain antibodies for the conformational trapping of membrane proteins.
Elife, 7, 2018
4NPE
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BU of 4npe by Molmil
High-resolution structure of C domain of staphylococcal protein A at room temperature
Descriptor: Immunoglobulin G-binding protein A, THIOCYANATE ION, ZINC ION
Authors:Deis, L.N, Pemble IV, C.W, Oas, T.G, Richardson, J.S, Richardson, D.C.
Deposit date:2013-11-21
Release date:2014-10-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Multiscale conformational heterogeneity in staphylococcal protein a: possible determinant of functional plasticity.
Structure, 22, 2014
5HZ7
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BU of 5hz7 by Molmil
High-resolution crystal structure of the minor DNA-binding pilin ComP from Neisseria meningitidis in fusion with MBP
Descriptor: 1,2-ETHANEDIOL, ComP, SODIUM ION, ...
Authors:Berry, J.-L.
Deposit date:2016-02-02
Release date:2016-05-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:A Comparative Structure/Function Analysis of Two Type IV Pilin DNA Receptors Defines a Novel Mode of DNA Binding.
Structure, 24, 2016
5H7Q
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BU of 5h7q by Molmil
Crystal structure of human MNDA PYD domain with MBP tag
Descriptor: ACETATE ION, MNDA PYD domain with MBP tag, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Jin, T.C, Xiao, T.S.
Deposit date:2016-11-20
Release date:2017-02-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.451 Å)
Cite:Design of an expression system to enhance MBP-mediated crystallization
Sci Rep, 7, 2017
6XDS
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BU of 6xds by Molmil
Crystal structure of MBP-TREM2 Ig domain fusion with fragment, 2-((4-bromophenyl)amino)ethan-1-ol
Descriptor: 2-[(4-bromophenyl)amino]ethan-1-ol, DIMETHYL SULFOXIDE, Sugar ABC transporter substrate-binding protein,Triggering receptor expressed on myeloid cells 2, ...
Authors:Su, H.P.
Deposit date:2020-06-11
Release date:2021-02-17
Method:X-RAY DIFFRACTION (1.466 Å)
Cite:Development of a robust crystallization platform for immune receptor TREM2 using a crystallization chaperone strategy.
Protein Expr.Purif., 179, 2021
8SVY
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BU of 8svy by Molmil
MBP-Mcl1 in complex with ligand 10
Descriptor: (15P)-17-chloro-33-fluoro-12-[(2-methoxyethoxy)methyl]-5,14,22-trimethyl-28-oxa-9-thia-5,6,13,14,22-pentaazaheptacyclo[27.7.1.1~4,7~.0~11,15~.0~16,21~.0~20,24~.0~30,35~]octatriaconta-1(36),4(38),6,11(15),12,16,18,20,23,29(37),30,32,34-tridecaene-23-carboxylic acid, 1,2-ETHANEDIOL, GLYCEROL, ...
Authors:Miller, B.R, Shaffer, P.
Deposit date:2023-05-17
Release date:2023-08-09
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Macrocyclic Carbon-Linked Pyrazoles As Novel Inhibitors of MCL-1.
Acs Med.Chem.Lett., 14, 2023
4IRL
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BU of 4irl by Molmil
X-ray structure of the CARD domain of zebrafish GBP-NLRP1 like protein
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Jin, T, Huang, M, Smith, P, Xiao, T.
Deposit date:2013-01-15
Release date:2013-08-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Structure of the caspase-recruitment domain from a zebrafish guanylate-binding protein.
Acta Crystallogr.,Sect.F, 69, 2013
3MP6
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BU of 3mp6 by Molmil
Complex Structure of Sgf29 and dimethylated H3K4
Descriptor: H3K4me2 peptide, Maltose-binding periplasmic protein,LINKER,SAGA-associated factor 29, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Li, J, Wu, M, Ruan, J, Zang, J.
Deposit date:2010-04-25
Release date:2011-05-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Sgf29 binds histone H3K4me2/3 and is required for SAGA complex recruitment and histone H3 acetylation
Embo J., 30, 2011
4NPF
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BU of 4npf by Molmil
High-resolution structure of two tandem B domains of staphylococcal protein A connected by the conserved linker
Descriptor: Immunoglobulin G-binding protein A
Authors:Deis, L.N, Pemble IV, C.W, Oas, T.G, Richardson, J.S, Richardson, D.C.
Deposit date:2013-11-21
Release date:2014-10-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Multiscale conformational heterogeneity in staphylococcal protein a: possible determinant of functional plasticity.
Structure, 22, 2014

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