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PDB: 39 results

4CVR
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BU of 4cvr by Molmil
Structure of Apobacterioferritin Y25F variant
Descriptor: BACTERIOFERRITIN, ZINC ION
Authors:Hingorani, K, Pace, R, Whitney, S, Murray, J.W, Wydrzynski, T, Cheah, M.H, Smith, P, Hillier, W.
Deposit date:2014-03-29
Release date:2014-08-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Photo-Oxidation of Tyrosine in a Bio-Engineered Bacterioferritin 'Reaction Centre'-A Protein Model for Artificial Photosynthesis.
Biochim.Biophys.Acta, 1837, 2014
8OUC
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Escherichia coli DPS
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DNA protection during starvation protein
Authors:Kovalenko, V.V, Loiko, N.G, Tereshkina, K.B, Tereshkin, E.V, Chulichkov, A.L, Popov, A.N, Krupyanskii, Y.F.
Deposit date:2023-04-22
Release date:2023-05-03
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Escherichia coli DPS
To be published
4CVS
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BU of 4cvs by Molmil
Structure of Apobacterioferritin Y45F variant
Descriptor: BACTERIOFERRITIN, CADMIUM ION
Authors:Hingorani, K, Pace, R, Whitney, S, Murray, J.W, Wydrzynski, T, Cheah, M.H, Smith, P, Hillier, W.
Deposit date:2014-03-29
Release date:2014-08-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.392 Å)
Cite:Photo-Oxidation of Tyrosine in a Bio-Engineered Bacterioferritin 'Reaction Centre'-A Protein Model for Artificial Photosynthesis.
Biochim.Biophys.Acta, 1837, 2014
6B0D
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An E. coli DPS protein from ferritin superfamily
Descriptor: DNA protection during starvation protein, FORMIC ACID, SODIUM ION
Authors:Rui, W, Ruslan, S, Ronan, K, Adam, J.S.
Deposit date:2017-09-14
Release date:2018-09-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:SIMBAD: a sequence-independent molecular-replacement pipeline.
Acta Crystallogr D Struct Biol, 74, 2018
2Y3Q
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BU of 2y3q by Molmil
1.55A structure of apo bacterioferritin from E. coli
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, BACTERIOFERRITIN, ...
Authors:Hough, M.A, Antonyuk, S.V.
Deposit date:2010-12-22
Release date:2011-02-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Monitoring and Validating Active Site Redox States in Protein Crystals.
Biochim.Biophys.Acta, 1814, 2011
4XKS
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BU of 4xks by Molmil
E. coli BFR variant Y45F
Descriptor: Bacterioferritin, SULFATE ION
Authors:Hemmings, A.M, Le Brun, N.E, Bradley, J.M.
Deposit date:2015-01-12
Release date:2015-12-16
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Three Aromatic Residues are Required for Electron Transfer during Iron Mineralization in Bacterioferritin.
Angew.Chem.Int.Ed.Engl., 54, 2015
1DPS
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BU of 1dps by Molmil
THE CRYSTAL STRUCTURE OF DPS, A FERRITIN HOMOLOG THAT BINDS AND PROTECTS DNA
Descriptor: DPS, SODIUM ION
Authors:Grant, R.A, Filman, D.J, Finkel, S.E, Kolter, R, Hogle, J.M.
Deposit date:1998-02-23
Release date:1998-09-16
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The crystal structure of Dps, a ferritin homolog that binds and protects DNA.
Nat.Struct.Biol., 5, 1998
6P8K
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BU of 6p8k by Molmil
Escherichia coli Bacterioferritin Substituted with Zinc Protoporphyrin IX
Descriptor: Bacterioferritin, MALONATE ION, PROTOPORPHYRIN IX CONTAINING ZN, ...
Authors:Taylor, A.B, Cioloboc, D, Kurtz, D.M.
Deposit date:2019-06-07
Release date:2020-05-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of a Zinc Porphyrin-Substituted Bacterioferritin and Photophysical Properties of Iron Reduction.
Biochemistry, 59, 2020
3O2H
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E. coli ClpS in complex with a Leu N-end rule peptide
Descriptor: ATP-dependent Clp protease adaptor protein ClpS, DNA protection during starvation protein
Authors:Roman-Hernandez, G, Grant, R.A, Sauer, R.T, Baker, T.A, de Regt, A.
Deposit date:2010-07-22
Release date:2011-12-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The ClpS adaptor mediates staged delivery of N-end rule substrates to the AAA+ ClpAP protease.
Mol.Cell, 43, 2011
2W9R
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BU of 2w9r by Molmil
Structural basis of N-end rule substrate recognition in Escherichia coli by the ClpAP adaptor protein ClpS
Descriptor: ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS, DNA PROTECTION DURING STARVATION PROTEIN
Authors:Schuenemann, V, Kralik, S.M, Albrecht, R, Spall, S.K, Truscott, K.N, Dougan, D.A, Zeth, K.
Deposit date:2009-01-28
Release date:2009-04-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Basis of N-End Rule Substrate Recognition in Escherichia Coli by the Clpap Adaptor Protein Clps.
Embo Rep., 10, 2009
4XKU
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E coli BFR variant Y114F
Descriptor: Bacterioferritin, SULFATE ION
Authors:Hemmings, A.M, Le Brun, N.E, Bradley, J.M.
Deposit date:2015-01-12
Release date:2015-12-16
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Three Aromatic Residues are Required for Electron Transfer during Iron Mineralization in Bacterioferritin.
Angew.Chem.Int.Ed.Engl., 54, 2015
4CVT
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Structure of Apobacterioferritin Y58F variant
Descriptor: BACTERIOFERRITIN, ZINC ION
Authors:Hingorani, K, Pace, R, Whitney, S, Murray, J.W, Wydrzynski, T, Cheah, M.H, Smith, P, Hillier, W.
Deposit date:2014-03-29
Release date:2014-08-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.794 Å)
Cite:Photo-Oxidation of Tyrosine in a Bio-Engineered Bacterioferritin 'Reaction Centre'-A Protein Model for Artificial Photosynthesis.
Biochim.Biophys.Acta, 1837, 2014
3E2C
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BU of 3e2c by Molmil
Escherichia coli Bacterioferritin Mutant E128R/E135R
Descriptor: 1,2-ETHANEDIOL, Bacterioferritin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Wong, S.G, Tom-Yew, S.A.L, Lewin, A, Le Brun, N.E, Moore, G.R, Murphy, M.E.P, Mauk, A.G.
Deposit date:2008-08-05
Release date:2009-05-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and Mechanistic Studies of a Stabilized Subunit Dimer Variant of Escherichia coli Bacterioferritin Identify Residues Required for Core Formation.
J.Biol.Chem., 284, 2009
4XKT
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BU of 4xkt by Molmil
E coli BFR variant Y149F
Descriptor: Bacterioferritin, SULFATE ION
Authors:Bradley, J.M, Hemmings, A.M, Le Brun, N.E.
Deposit date:2015-01-12
Release date:2015-12-16
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Three Aromatic Residues are Required for Electron Transfer during Iron Mineralization in Bacterioferritin.
Angew.Chem.Int.Ed.Engl., 54, 2015
6ZGL
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BU of 6zgl by Molmil
Structure of DPS determined by movement-free cryoEM with zero dose extrapolation
Descriptor: DNA protection during starvation protein
Authors:Naydenova, K, Russo, C.J.
Deposit date:2020-06-19
Release date:2020-10-21
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (1.9 Å)
Cite:Cryo-EM with sub-1 angstrom specimen movement.
Science, 370, 2020
2VXI
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BU of 2vxi by Molmil
The binding of heme and zinc in Escherichia coli Bacterioferritin
Descriptor: BACTERIOFERRITIN, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION, ...
Authors:Willies, S.C, Isupov, M.N, Garman, E.F, Littlechild, J.A.
Deposit date:2008-07-04
Release date:2008-11-04
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:The Binding of Haem and Zinc in the 1.9 A X-Ray Structure of Escherichia Coli Bacterioferritin.
J.Biol.Inorg.Chem., 14, 2009
5XGO
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BU of 5xgo by Molmil
The Ferritin E-Domain: Toward Understanding Its Role in Protein Cage Assembly Through the Crystal Structure of a Maxi-/Mini-Ferritin Chimera
Descriptor: CHLORIDE ION, DNA protection during starvation protein,Bacterioferritin
Authors:Cornell, T.A, Srivastava, Y, Jauch, R, Fan, R, Orner, B.P.
Deposit date:2017-04-14
Release date:2018-02-28
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:The Crystal Structure of a Maxi/Mini-Ferritin Chimera Reveals Guiding Principles for the Assembly of Protein Cages.
Biochemistry, 56, 2017
6P8L
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BU of 6p8l by Molmil
Escherichia coli Bacterioferritin Substituted with Zinc Protoporphyrin IX (Zn Absorption Edge X-ray Data)
Descriptor: Bacterioferritin, MALONATE ION, PROTOPORPHYRIN IX CONTAINING ZN, ...
Authors:Taylor, A.B, Cioloboc, D, Kurtz, D.M.
Deposit date:2019-06-07
Release date:2020-05-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of a Zinc Porphyrin-Substituted Bacterioferritin and Photophysical Properties of Iron Reduction.
Biochemistry, 59, 2020
4CVP
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BU of 4cvp by Molmil
Structure of Apobacterioferritin
Descriptor: BACTERIOFERRITIN, FE (III) ION
Authors:Hingorani, K, Pace, R, Whitney, S, Murray, J.W, Wydrzynski, T, Cheah, M.H, Smith, P, Hillier, W.
Deposit date:2014-03-28
Release date:2014-08-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Photo-Oxidation of Tyrosine in a Bio-Engineered Bacterioferritin 'Reaction Centre'-A Protein Model for Artificial Photosynthesis.
Biochim.Biophys.Acta, 1837, 2014
3E1P
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BU of 3e1p by Molmil
Crystal structure of E. coli Bacterioferritin (BFR) in which the Ferroxidase centre is inhibited with ZN(II) and high occupancy iron is bound within the cavity.
Descriptor: BACTERIOFERRITIN, FE (II) ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Crow, A, Lawson, T, Lewin, A, Moore, G.R, Le Brun, N.
Deposit date:2008-08-04
Release date:2009-05-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for iron mineralization by bacterioferritin
J.Am.Chem.Soc., 131, 2009
6GCM
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BU of 6gcm by Molmil
Escherichia coli DPS
Descriptor: DNA protection during starvation protein
Authors:Kovalenko, V.V, Loiko, N.G, Tereshkin, E.V, Tereshkina, K.B, Chulichkov, A.L, Popov, A.N, Krupyanskii, Y.F.
Deposit date:2018-04-18
Release date:2019-05-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Escherichia coli DPS
To Be Published
3E1L
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BU of 3e1l by Molmil
Crystal structure of E. coli Bacterioferritin (BFR) soaked in phosphate with an alternative conformation of the unoccupied Ferroxidase centre (APO-BFR II).
Descriptor: BACTERIOFERRITIN, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Crow, A, Lawson, T, Lewin, A, Moore, G.R, Le Brun, N.
Deposit date:2008-08-04
Release date:2009-05-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for iron mineralization by bacterioferritin
J.Am.Chem.Soc., 131, 2009
2HTN
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BU of 2htn by Molmil
E. coli bacterioferritin in its as-isolated form
Descriptor: Bacterioferritin, FE (III) ION, PROTOPORPHYRIN IX CONTAINING FE
Authors:van Eerde, A, Wolterink-Van Loo, S, Van Der Oost, J, Dijkstra, B.W.
Deposit date:2006-07-26
Release date:2006-11-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Fortuitous structure determination of 'as-isolated' Escherichia coli bacterioferritin in a novel crystal form.
Acta Crystallogr.,Sect.F, 62, 2006
1F33
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THE STRUCTURAL BASIS FOR DNA PROTECTION BY E. COLI DPS PROTEIN
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DNA PROTECTION DURING STARVATION PROTEIN
Authors:Luo, J, Liu, D, White, M.A, Fox, R.O.
Deposit date:2000-05-31
Release date:2003-06-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Structural Basis for DNA Protection by E. coli Dps Protein
To be Published
3E1Q
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Crystal structure of W133F variant E. coli Bacterioferritn with iron.
Descriptor: BACTERIOFERRITIN, FE (II) ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Crow, A, Lawson, T.L, Lewin, A, Moore, G.R, Le Brun, N.E.
Deposit date:2008-08-04
Release date:2009-08-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Monitoring the iron status of the ferroxidase center of Escherichia coli bacterioferritin using fluorescence spectroscopy.
Biochemistry, 48, 2009

 

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