PDB Search results for query - Protein Data Bank Japan

PDB: 3 results

Crystal Structure of the dioxygenase CcTet from Coprinopsis cinerea bound to 12bp 5-methylcytosine (5mC) containing duplex DNA
Descriptor:	2OGFeDO JBP1/TET oxygenase domain-containing protein, DNA (5'-D(PCPGPAPTPCP(5CM)PGPCPTPAPCPG)-3'), DNA (5'-D(PCPGPTPAPGPCPTPGPAPTPCPG)-3'), ...
Authors:	Zhang, L, Zhang, L.
Deposit date:	2023-06-01
Release date:	2024-03-06
Last modified:	2024-05-08
Method:	X-RAY DIFFRACTION (2.3 Å)
Cite:	Molecular basis of an atypical dsDNA 5mC/6mA bifunctional dioxygenase CcTet from Coprinopsis cinerea in catalyzing dsDNA 5mC demethylation. Nucleic Acids Res., 52, 2024

Crystal Structure of the dioxygenase CcTet from Coprinopsis cinereain bound to 12bp N6-methyldeoxyadenine (6mA) containing duplex DNA
Descriptor:	CcTet, DNA, DNA (12-MER), ...
Authors:	Mu, Y.J, Zhang, L, Zhang, L.
Deposit date:	2021-11-30
Release date:	2022-03-30
Last modified:	2023-11-29
Method:	X-RAY DIFFRACTION (2.3 Å)
Cite:	A fungal dioxygenase CcTet serves as a eukaryotic 6mA demethylase on duplex DNA. Nat.Chem.Biol., 18, 2022

Crystal Structure of the dioxygenase CcTet from Coprinopsis cinereain in complex with Mn(II) and N-Oxalylglycine
Descriptor:	CcTet molecule, MANGANESE (II) ION, N-OXALYLGLYCINE
Authors:	Mu, Y.J, Zhang, L, Zhang, L.
Deposit date:	2021-10-17
Release date:	2022-03-30
Last modified:	2023-11-29
Method:	X-RAY DIFFRACTION (2.6 Å)
Cite:	A fungal dioxygenase CcTet serves as a eukaryotic 6mA demethylase on duplex DNA. Nat.Chem.Biol., 18, 2022