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2QDB
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BU of 2qdb by Molmil
Crystal structure of staphylococcal nuclease variant E75Q/D21N/T33V/T41I/S59A/P117G/S128A at 100 K
Descriptor: PHOSPHATE ION, Thermonuclease
Authors:Baran, K.L, Schlessman, J.L, Garcia-Moreno, B.E.
Deposit date:2007-06-20
Release date:2008-07-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Electrostatic effects in a network of polar and ionizable groups in staphylococcal nuclease.
J.Mol.Biol., 379, 2008
2QFP
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BU of 2qfp by Molmil
Crystal structure of red kidney bean purple acid phosphatase in complex with fluoride
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, FE (III) ION, FLUORIDE ION, ...
Authors:Guddat, L.W, Schenk, G.S, Gahan, L.R, Elliot, T.W, Leung, E.
Deposit date:2007-06-27
Release date:2008-10-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of a purple acid phosphatase, representing different steps of this enzyme's catalytic cycle.
Bmc Struct.Biol., 8, 2008
2QKS
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BU of 2qks by Molmil
Crystal structure of a Kir3.1-prokaryotic Kir channel chimera
Descriptor: Kir3.1-prokaryotic Kir channel chimera, POTASSIUM ION, nonyl beta-D-glucopyranoside
Authors:Nishida, M, MacKinnon, R.
Deposit date:2007-07-11
Release date:2007-08-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of a Kir3.1-prokaryotic Kir channel chimera.
Embo J., 26, 2007
2QL6
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BU of 2ql6 by Molmil
human nicotinamide riboside kinase (NRK1)
Descriptor: (1R)-1-[4-(AMINOCARBONYL)-1,3-THIAZOL-2-YL]-1,4-ANHYDRO-D-RIBITOL, ADENOSINE-5'-DIPHOSPHATE, nicotinamide riboside kinase 1
Authors:Khan, J.A, Xiang, S, Tong, L.
Deposit date:2007-07-12
Release date:2007-10-02
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of human nicotinamide riboside kinase
Structure, 15, 2007
2QMZ
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BU of 2qmz by Molmil
Quinone Reductase 2 in Complex with Dopamine
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, L-DOPAMINE, Ribosyldihydronicotinamide dehydrogenase, ...
Authors:Fu, Y, Buryanovskyy, L, Zhang, Z.
Deposit date:2007-07-17
Release date:2008-06-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Quinone Reductase 2 Regulates Catecholamine Oxidation
To be Published
2QSQ
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BU of 2qsq by Molmil
Crystal structure of the N-terminal domain of carcinoembryonic antigen (CEA)
Descriptor: CHLORIDE ION, Carcinoembryonic antigen-related cell adhesion molecule 5, GLYCEROL
Authors:Le Trong, I, Korotkova, N, Moseley, S.L, Stenkamp, R.E.
Deposit date:2007-07-31
Release date:2008-01-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Binding of Dr adhesins of Escherichia coli to carcinoembryonic antigen triggers receptor dissociation.
Mol.Microbiol., 67, 2008
2QT9
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BU of 2qt9 by Molmil
Human dipeptidyl peptidase iv/cd26 in complex with a 4-aryl cyclohexylalanine inhibitor
Descriptor: (2S,3S)-3-AMINO-4-[(3S)-3-FLUOROPYRROLIDIN-1-YL]-N,N-DIMETHYL-4-OXO-2-(TRANS-4-[1,2,4]TRIAZOLO[1,5-A]PYRIDIN-5-YLCYCLOH EXYL)BUTANAMIDE, 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Scapin, G.
Deposit date:2007-08-01
Release date:2007-11-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:4-Arylcyclohexylalanine analogs as potent, selective, and orally active inhibitors of dipeptidyl peptidase IV.
Bioorg.Med.Chem.Lett., 17, 2007
2QQF
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Hst2 bound to ADP-HPD and Acetylated histone H4
Descriptor: 5'-O-[(S)-{[(S)-{[(2R,3R,4S)-3,4-DIHYDROXYPYRROLIDIN-2-YL]METHOXY}(HYDROXY)PHOSPHORYL]OXY}(HYDROXY)PHOSPHORYL]ADENOSINE, Histone H4, NAD-dependent deacetylase HST2, ...
Authors:Marmorstein, R, Sanders, B.D, Zhao, K, Slama, J.
Deposit date:2007-07-26
Release date:2007-10-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for nicotinamide inhibition and base exchange in sir2 enzymes.
Mol.Cell, 25, 2007
2R2I
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BU of 2r2i by Molmil
Myristoylated Guanylate Cyclase Activating Protein-1 with Calcium Bound
Descriptor: BETA-MERCAPTOETHANOL, CALCIUM ION, Guanylyl cyclase-activating protein 1, ...
Authors:Stephen, R.
Deposit date:2007-08-25
Release date:2007-12-11
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Stabilizing function for myristoyl group revealed by the crystal structure of a neuronal calcium sensor, guanylate cyclase-activating protein 1.
Structure, 15, 2007
2R1U
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BU of 2r1u by Molmil
DJ-1 activation by catechol quinone modification
Descriptor: Protein DJ-1
Authors:Zhongtao, Z, Yue, F.
Deposit date:2007-08-23
Release date:2008-08-26
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:DJ-1 activation by catechol quinone modification
To be Published
2R2M
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BU of 2r2m by Molmil
2-(2-Chloro-6-Fluorophenyl)Acetamides as Potent Thrombin Inhibitors
Descriptor: Hirudin-3A, N-[2-({[amino(imino)methyl]amino}oxy)ethyl]-2-{6-chloro-3-[(2,2-difluoro-2-phenylethyl)amino]-2-fluorophenyl}acetamide, Thrombin heavy chain, ...
Authors:Spurlino, J.
Deposit date:2007-08-27
Release date:2008-08-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:2-(2-Chloro-6-Fluorophenyl)Acetamides as Potent Thrombin Inhibitors
Bioorg.Med.Chem.Lett., 17, 2007
2R3G
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BU of 2r3g by Molmil
Crystal Structure of Cyclin-Dependent Kinase 2 with inhibitor
Descriptor: 6-(2-fluorophenyl)-N-(pyridin-3-ylmethyl)imidazo[1,2-a]pyrazin-8-amine, Cell division protein kinase 2
Authors:Fischmann, T.O, Hruza, A.W, Madison, V.M, Duca, J.S.
Deposit date:2007-08-29
Release date:2008-01-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure-guided discovery of cyclin-dependent kinase inhibitors.
Biopolymers, 89, 2008
2QBM
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BU of 2qbm by Molmil
Crystal structure of the P450cam G248T mutant in the cyanide bound state
Descriptor: CAMPHOR, CYANIDE ION, Cytochrome P450-cam, ...
Authors:von Koenig, K, Makris, T.M, Sligar, S.D, Schlichting, I.
Deposit date:2007-06-18
Release date:2007-12-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Alteration of P450 Distal Pocket Solvent Leads to Impaired Proton Delivery and Changes in Heme Geometry.
Biochemistry, 46, 2007
2QFS
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BU of 2qfs by Molmil
E.coli EPSP synthase Pro101Ser liganded with S3P
Descriptor: 3-phosphoshikimate 1-carboxyvinyltransferase, FORMIC ACID, SHIKIMATE-3-PHOSPHATE
Authors:Schonbrunn, E, Healy-Fried, M.L.
Deposit date:2007-06-28
Release date:2007-10-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural basis of glyphosate tolerance resulting from mutations of Pro101 in Escherichia coli 5-enolpyruvylshikimate-3-phosphate synthase.
J.Biol.Chem., 282, 2007
2QIQ
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BU of 2qiq by Molmil
Structure-based Design and Synthesis and Biological Evaluation of Peptidomimetic SARS-3CLpro Inhibitors
Descriptor: ETHYL (4R)-4-{[(2R,5S)-5-{[N-(TERT-BUTOXYCARBONYL)-L-SERYL]AMINO}-6-METHYL-2-(3-METHYLBUT-2-EN-1-YL)-4-OXOHEPTANOYL]AMINO}-5-[(3R)-2-OXOPYRROLIDIN-3-YL]PENTANOATE, Replicase polyprotein 1ab
Authors:Grum-Tokars, V.
Deposit date:2007-07-05
Release date:2008-02-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-based design, synthesis, and biological evaluation of peptidomimetic SARS-CoV 3CLpro inhibitors.
Bioorg.Med.Chem.Lett., 17, 2007
2QKL
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BU of 2qkl by Molmil
The crystal structure of fission yeast mRNA decapping enzyme Dcp1-Dcp2 complex
Descriptor: LEAD (II) ION, SPAC19A8.12 protein, SPBC3B9.21 protein
Authors:She, M, Chen, N, Song, H.
Deposit date:2007-07-11
Release date:2008-03-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Structural basis of dcp2 recognition and activation by dcp1.
Mol.Cell, 29, 2008
2QKM
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BU of 2qkm by Molmil
The crystal structure of fission yeast mRNA decapping enzyme Dcp1-Dcp2 complex
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, SPAC19A8.12 protein, SPBC3B9.21 protein
Authors:She, M, Song, H.
Deposit date:2007-07-11
Release date:2008-04-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis of dcp2 recognition and activation by dcp1.
Mol.Cell, 29, 2008
7AAD
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BU of 7aad by Molmil
Crystal structure of the catalytic domain of human PARP1 in complex with olaparib
Descriptor: 4-(3-{[4-(cyclopropylcarbonyl)piperazin-1-yl]carbonyl}-4-fluorobenzyl)phthalazin-1(2H)-one, Poly [ADP-ribose] polymerase 1, SULFATE ION
Authors:Schimpl, M, Ogden, T.E.H, Yang, J.-C, Easton, L.E, Underwood, E, Rawlins, P.B, Johannes, J.W, Embrey, K.J, Neuhaus, D.
Deposit date:2020-09-04
Release date:2021-01-13
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Dynamics of the HD regulatory subdomain of PARP-1; substrate access and allostery in PARP activation and inhibition.
Nucleic Acids Res., 49, 2021
6XMX
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BU of 6xmx by Molmil
Cryo-EM structure of BCL6 bound to BI-3802
Descriptor: 2-[6-[[5-chloranyl-2-[(3~{S},5~{R})-3,5-dimethylpiperidin-1-yl]pyrimidin-4-yl]amino]-1-methyl-2-oxidanylidene-quinolin-3-yl]oxy-~{N}-methyl-ethanamide, B-cell lymphoma 6 protein
Authors:Yoon, H, Burman, S.S.R, Hunkeler, M, Nowak, R.P, Fischer, E.S.
Deposit date:2020-07-01
Release date:2020-11-25
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Small-molecule-induced polymerization triggers degradation of BCL6.
Nature, 588, 2020
2G6X
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BU of 2g6x by Molmil
Crystal structure of a novel green fluorescent protein from marine copepod Pontellina plumata
Descriptor: green fluorescent protein 2
Authors:Evdokimov, A.G, Pokross, M.E, Chudakov, D.M.
Deposit date:2006-02-26
Release date:2006-03-28
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for the fast maturation of Arthropoda green fluorescent protein.
Embo Rep., 7, 2006
6KJ4
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BU of 6kj4 by Molmil
120kV MicroED structure of FUS (37-42) SYSGYS solved from single crystal at 0.65 A
Descriptor: RNA-binding protein FUS
Authors:Zhou, H, Luo, F, Luo, Z, Li, D, Liu, C, Li, X.
Deposit date:2019-07-20
Release date:2019-10-02
Last modified:2024-03-27
Method:ELECTRON CRYSTALLOGRAPHY (0.65 Å)
Cite:Programming Conventional Electron Microscopes for Solving Ultrahigh-Resolution Structures of Small and Macro-Molecules.
Anal.Chem., 91, 2019
6X6L
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BU of 6x6l by Molmil
Cryo-EM Structure of CagX and CagY within the dCag3 Helicobacter pylori PR
Descriptor: Cag pathogenicity island protein (Cag7), Cag pathogenicity island protein (Cag8)
Authors:Sheedlo, M.J, Chung, J.M, Sawhney, N, Durie, C.L, Cover, T.L, Ohi, M.D, Lacy, D.B.
Deposit date:2020-05-28
Release date:2020-09-30
Last modified:2021-04-14
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Cryo-EM reveals species-specific components within the Helicobacter pylori Cag type IV secretion system core complex.
Elife, 9, 2020
6X64
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BU of 6x64 by Molmil
Legionella pneumophila Dot T4SS PR
Descriptor: Type IV secretion system unknown protein fragment
Authors:Durie, C.L, Sheedlo, M.J, Chung, J.M, Byrne, B.G, Su, M, Knight, T, Swanson, M.S, Lacy, D.B, Ohi, M.D.
Deposit date:2020-05-27
Release date:2020-10-07
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural analysis of the Legionella pneumophila Dot/Icm type IV secretion system core complex.
Elife, 9, 2020
2GEQ
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BU of 2geq by Molmil
Crystal Structure of a p53 Core Dimer Bound to DNA
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5'-D(*GP*CP*GP*TP*GP*AP*GP*CP*AP*TP*GP*CP*TP*CP*AP*C)-3', Cellular tumor antigen p53, ...
Authors:Ho, W.C, Fitzgerald, M.X, Marmorstein, R.
Deposit date:2006-03-20
Release date:2006-05-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the p53 Core Domain Dimer Bound to DNA.
J.Biol.Chem., 281, 2006
7A8O
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rsGreen0.7-K206A-N205S in the green-on state
Descriptor: 1,2-ETHANEDIOL, Green fluorescent protein
Authors:De Zitter, E, Dedecker, P, Van Meervelt, L.
Deposit date:2020-08-30
Release date:2021-02-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure-Function Dataset Reveals Environment Effects within a Fluorescent Protein Model System*.
Angew.Chem.Int.Ed.Engl., 60, 2021

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數據於2024-08-21公開中

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