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9FB4
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BU of 9fb4 by Molmil
SV40 large T antigen assembly with DNA in presence of ATP.
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Chains: P, Chains: T, ...
Authors:Shahid, T, De Biasio, A.
Deposit date:2024-05-11
Release date:2025-02-05
Last modified:2025-04-02
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:Structural dynamics of DNA unwinding by a replicative helicase.
Nature, 2025
9FA1
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BU of 9fa1 by Molmil
Active SV40 LTAg complex with DNA (3D variability component_002, frame_010).
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Chains: S, Large T antigen
Authors:Shahid, T.
Deposit date:2024-05-09
Release date:2025-02-05
Last modified:2025-04-02
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural dynamics of DNA unwinding by a replicative helicase.
Nature, 2025
9F9X
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BU of 9f9x by Molmil
Active SV40 LTAg complex with DNA (3D variability component_001, frame_000).
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Chains: S, Large T antigen
Authors:Shahid, T.
Deposit date:2024-05-09
Release date:2025-02-05
Last modified:2025-04-02
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural dynamics of DNA unwinding by a replicative helicase.
Nature, 2025
7R0A
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BU of 7r0a by Molmil
Structure of sarin phosphonylated acetylcholinesterase in complex with 2-((hydroxyimino)methyl)-1-(5-(4-methyl-3-nitrobenzamido)pentyl)pyridinium
Descriptor: 2,5,8,11,14,17-HEXAOXANONADECAN-19-OL, 2-(2-METHOXYETHOXY)ETHANOL, 2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXYL, ...
Authors:Forsgren, N, Lindgren, C, Edvinsson, L, Linusson, A, Ekstrom, F.
Deposit date:2022-02-01
Release date:2022-04-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Broad-Spectrum Antidote Discovery by Untangling the Reactivation Mechanism of Nerve-Agent-Inhibited Acetylcholinesterase.
Chemistry, 28, 2022
7D8T
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BU of 7d8t by Molmil
MITF bHLHLZ complex with M-box DNA
Descriptor: DNA (5'-D(*TP*GP*TP*AP*AP*CP*AP*TP*GP*TP*GP*TP*CP*CP*CP*C)-3'), DNA (5'-D(P*GP*GP*GP*AP*CP*AP*CP*AP*TP*GP*TP*TP*AP*CP*AP*G)-3'), Microphthalmia-associated transcription factor,Methionyl-tRNA synthetase beta subunit
Authors:Guo, M, Fang, P, Wang, J.
Deposit date:2020-10-09
Release date:2021-10-13
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.201 Å)
Cite:A unique hyperdynamic dimer interface permits small molecule perturbation of the melanoma oncoprotein MITF for melanoma therapy.
Cell Res., 33, 2023
7R7B
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BU of 7r7b by Molmil
1.50 Angstroem Crystal Structure of FeoA from Bacteroides fragilis
Descriptor: Ferrous iron transport protein B, GLYCEROL, PHOSPHATE ION
Authors:Sestok, A.E, Smith, A.T.
Deposit date:2021-06-24
Release date:2022-04-27
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A fusion of the Bacteroides fragilis ferrous iron import proteins reveals a role for FeoA in stabilizing GTP-bound FeoB.
J.Biol.Chem., 298, 2022
2WLA
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BU of 2wla by Molmil
Streptococcus pyogenes Dpr
Descriptor: DPS-LIKE PEROXIDE RESISTANCE PROTEIN, GLYCEROL
Authors:Haikarainen, T, Tsou, C.-C, Wu, J.-J, Papageorgiou, A.C.
Deposit date:2009-06-23
Release date:2009-09-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structures of Streptococcus Pyogenes Dpr Reveal a Dodecameric Iron-Binding Protein with a Ferroxidase Site.
J.Biol.Inorg.Chem., 15, 2010
6N96
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BU of 6n96 by Molmil
Methylmalonyl-CoA decarboxylase in complex with 2-sulfonate-propionyl-oxa(dethia)-CoA
Descriptor: (2~{R})-1-[2-[3-[[(2~{R})-4-[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,3-dimethyl-2-oxidanyl-butanoyl]amino]propanoylamino]ethoxy]-1-oxidanylidene-propane-2-sulfonic acid, (2~{S})-1-[2-[3-[[(2~{R})-4-[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,3-dimethyl-2-oxidanyl-butanoyl]amino]propanoylamino]ethoxy]-1-oxidanylidene-propane-2-sulfonic acid, IMIDAZOLE, ...
Authors:Stunkard, L.M, Dixon, A.D, Huth, T.J, Lohman, J.R.
Deposit date:2018-11-30
Release date:2019-04-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Sulfonate/Nitro Bearing Methylmalonyl-Thioester Isosteres Applied to Methylmalonyl-CoA Decarboxylase Structure-Function Studies.
J. Am. Chem. Soc., 141, 2019
7D8R
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BU of 7d8r by Molmil
MITF HLHLZ structure
Descriptor: Microphthalmia-associated transcription factor,Methionyl-tRNA synthetase beta subunit
Authors:Guo, M, Fang, P, Wang, J.
Deposit date:2020-10-09
Release date:2021-10-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:A unique hyperdynamic dimer interface permits small molecule perturbation of the melanoma oncoprotein MITF for melanoma therapy.
Cell Res., 33, 2023
7R02
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BU of 7r02 by Molmil
Mus musculus acetylcholinesterase in complex with N-(3-(diethylamino)propyl)-4-methyl-3-nitrobenzamide
Descriptor: 1,2-ETHANEDIOL, 2-(2-METHOXYETHOXY)ETHANOL, 2-[2-[2-[2-[2-[2-(2-methoxyethoxy)ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethanol, ...
Authors:Forsgren, N, Lindgren, C, Edvinsson, L, Linusson, A, Ekstrom, F.
Deposit date:2022-02-01
Release date:2022-04-27
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Broad-Spectrum Antidote Discovery by Untangling the Reactivation Mechanism of Nerve-Agent-Inhibited Acetylcholinesterase.
Chemistry, 28, 2022
9F39
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BU of 9f39 by Molmil
Crystal structure of SARS-CoV-2 Mpro in complex with RK-54
Descriptor: (2R,3R)-3-[[(2S)-3-cyclopropyl-2-[3-(2-methylpropanoylamino)-2-oxidanylidene-pyridin-1-yl]propanoyl]amino]-N-methyl-2-oxidanyl-4-[(3S)-2-oxidanylidenepyrrolidin-3-yl]butanamide, 3C-like proteinase nsp5
Authors:El kilani, H, Hilgenfeld, R.
Deposit date:2024-04-25
Release date:2025-01-29
Last modified:2025-02-26
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structure-Based Optimization of Pyridone alpha-Ketoamides as Inhibitors of the SARS-CoV-2 Main Protease.
J.Med.Chem., 68, 2025
7D8S
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BU of 7d8s by Molmil
MITF bHLHLZ apo structure
Descriptor: Microphthalmia-associated transcription factor,Methionyl-tRNA synthetase beta subunit, SULFATE ION
Authors:Guo, M, Fang, P, Wang, J.
Deposit date:2020-10-09
Release date:2021-10-13
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:A unique hyperdynamic dimer interface permits small molecule perturbation of the melanoma oncoprotein MITF for melanoma therapy.
Cell Res., 33, 2023
3OOI
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BU of 3ooi by Molmil
Crystal Structure of Human Histone-Lysine N-methyltransferase NSD1 SET domain in Complex with S-adenosyl-L-methionine
Descriptor: Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific, S-ADENOSYLMETHIONINE, ...
Authors:Qiao, Q, Wang, M, Xu, R.M.
Deposit date:2010-08-31
Release date:2010-12-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The structure of NSD1 reveals an autoregulatory mechanism underlying histone H3K36 methylation
J.Biol.Chem., 286, 2010
9FJX
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BU of 9fjx by Molmil
Crystal structure of human CRBN-DDB1 in complex with Lenalidomide
Descriptor: 1,2-ETHANEDIOL, DIMETHYL SULFOXIDE, DNA damage-binding protein 1, ...
Authors:Le Bihan, Y.-V, van Montfort, R.L.M.
Deposit date:2024-05-31
Release date:2025-01-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Evaluating the impact of CRBN mutations on response to immunomodulatory drugs and novel CRBN-binding agents in myeloma.
Blood, 2025
7RM6
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BU of 7rm6 by Molmil
Horse liver alcohol dehydrogenase in complex with NADH and N-cylcohexyl formamide
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Alcohol dehydrogenase E chain, CYCLOHEXYLFORMAMIDE, ...
Authors:Zheng, C, Boxer, S.G.
Deposit date:2021-07-26
Release date:2022-04-27
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:A two-directional vibrational probe reveals different electric field orientations in solution and an enzyme active site.
Nat.Chem., 14, 2022
7QVZ
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BU of 7qvz by Molmil
ARUK3001043_Notum
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, DIMETHYL SULFOXIDE, ...
Authors:Zhao, Y, Hillier, J, Willis, N.J, Mahy, W, Fish, P, Jones, E.Y.
Deposit date:2022-01-24
Release date:2022-05-04
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Structure Activity Analysis of Notum Fragment Screen Hits with Development
To Be Published
9EKE
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BU of 9eke by Molmil
Structure of a C1r Zymogen Fragment Bound to SALO, Y51F Mutant
Descriptor: Complement C1r subcomponent, Salivary anti-complement protein
Authors:Duan, H, Geisbrecht, B.V.
Deposit date:2024-12-02
Release date:2025-02-12
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Complement Evasion by Blocking Activation of the C1r Zymogen
To Be Published
9F73
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BU of 9f73 by Molmil
Active SV40 LTAg complex with DNA (3D variability component_002, frame_015).
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Chains: S, Large T antigen
Authors:Shahid, T.
Deposit date:2024-05-03
Release date:2025-02-05
Last modified:2025-04-02
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural dynamics of DNA unwinding by a replicative helicase.
Nature, 2025
7DA7
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BU of 7da7 by Molmil
Mouse Toll-like receptor 3 ectodomain in complex with lncRNA Rmrp in elongated form
Descriptor: RNA component of mitochondrial RNAase P (Rmrp), RNase MRP RNA, Toll-like receptor 3
Authors:Li, B, Cao, X.
Deposit date:2020-10-15
Release date:2021-10-20
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.47 Å)
Cite:Endosomal lncRNA Rmrp is required for TLR3 innate sensing by engaging TLR3 dimerization
To Be Published
174L
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BU of 174l by Molmil
PROTEIN FLEXIBILITY AND ADAPTABILITY SEEN IN 25 CRYSTAL FORMS OF T4 LYSOZYME
Descriptor: SULFATE ION, T4 LYSOZYME
Authors:Zhang, X.-J, Matthews, B.W.
Deposit date:1995-03-24
Release date:1995-07-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Protein flexibility and adaptability seen in 25 crystal forms of T4 lysozyme.
J.Mol.Biol., 250, 1995
9FHQ
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BU of 9fhq by Molmil
Crystal structure of SARS-CoV-2 Mpro in complex with RHTCR04
Descriptor: 3C-like proteinase nsp5, ~{tert}-butyl ~{N}-[1-[(2~{S})-1-[[(2~{S})-4-azanyl-3-oxidanyl-4-oxidanylidene-1-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]butan-2-yl]amino]-3-cyclopropyl-1-oxidanylidene-propan-2-yl]-6-oxidanylidene-pyrimidin-5-yl]carbamate
Authors:El kilani, H, Hilgenfeld, R.
Deposit date:2024-05-28
Release date:2025-01-29
Last modified:2025-02-26
Method:X-RAY DIFFRACTION (1.696 Å)
Cite:Structure-Based Optimization of Pyridone alpha-Ketoamides as Inhibitors of the SARS-CoV-2 Main Protease.
J.Med.Chem., 68, 2025
9EKD
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BU of 9ekd by Molmil
Structure of a C1r Zymogen Fragment Bound to SALO
Descriptor: Complement C1r subcomponent, Salivary anti-complement protein
Authors:Duan, H, Geisbrecht, B.V.
Deposit date:2024-12-02
Release date:2025-02-12
Method:X-RAY DIFFRACTION (3.28 Å)
Cite:Complement Evasion by Blocking Activation of the C1r Zymogen
To Be Published
7DMY
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BU of 7dmy by Molmil
The crystal structure of Cpd7 in complex with BPTF bromodomain
Descriptor: Nucleosome-remodeling factor subunit BPTF, tert-butyl 3-methyl-2-[[(3R,5R)-1-methyl-5-phenyl-piperidin-3-yl]amino]-4-oxidanylidene-5,7-dihydropyrrolo[3,4-d]pyrimidine-6-carboxylate
Authors:Xiong, L, Guo, Y, Yang, S.
Deposit date:2020-12-08
Release date:2021-10-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery of selective BPTF bromodomain inhibitors by screening and structure-based optimization.
Biochem.Biophys.Res.Commun., 545, 2021
7DN4
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BU of 7dn4 by Molmil
The crystal structure of Cpd8 in complex with BPTF bromodomain
Descriptor: 3-methyl-2-[[(3R,5R)-1-methyl-5-phenyl-piperidin-3-yl]amino]-6,7-dihydro-5H-cyclopenta[d]pyrimidin-4-one, Nucleosome-remodeling factor subunit BPTF
Authors:Xiong, L, Guo, Y, Yang, S.
Deposit date:2020-12-08
Release date:2021-10-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.841 Å)
Cite:Discovery of selective BPTF bromodomain inhibitors by screening and structure-based optimization.
Biochem.Biophys.Res.Commun., 545, 2021
7DAS
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BU of 7das by Molmil
Mouse Toll-like receptor 3 ectodomain in complex with lncRNA Rmrp in lapped form
Descriptor: RNA component of mitochondrial RNAase P (Rmrp), RNase MRP RNA, Toll-like receptor 3
Authors:Li, B, Cao, X.
Deposit date:2020-10-18
Release date:2021-10-20
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.64 Å)
Cite:Endosomal lncRNA Rmrp is required for TLR3 innate sensing by engaging TLR3 dimerization
To Be Published

234440

數據於2025-04-09公開中

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