PDB: 45797 resultsInfo pagesStatus searchChemie searchBIRD

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1W8A	Third LRR domain of Drosophila Slit Descriptor: SLIT PROTEIN Authors: Howitt, J.A, Clout, N.J, Hohenester, E. Deposit date: 2004-09-17 Release date: 2004-10-25 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Binding Site for Robo Receptors Revealed by Dissection of the Leucine-Rich Repeat Region of Slit. Embo J., 23, 2004
1W22	Crystal structure of inhibited human HDAC8 Descriptor: HISTONE DEACETYLASE 8, N-HYDROXY-4-(METHYL{[5-(2-PYRIDINYL)-2-THIENYL]SULFONYL}AMINO)BENZAMIDE, POTASSIUM ION, ... Authors: Vannini, A, Volpari, C, Caroli Casavola, E, Di Marco, S. Deposit date: 2004-06-25 Release date: 2004-09-24 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Crystal Structure of a Eukaryotic Zn-Dependent Histone Deacetylase,Human Hdac8,Complexed with a Hydroxamic Acid Inhibitor Proc.Natl.Acad.Sci.USA, 101, 2004
1U5U	The structure of an Allene Oxide Synthase reveals a novel use for a catalase fold Descriptor: Allene oxide synthase-lipoxygenase protein, PROTOPORPHYRIN IX CONTAINING FE Authors: Oldham, M.L, Brash, A.R, Newcomer, M.E. Deposit date: 2004-07-28 Release date: 2005-01-11 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2 Å) Cite: The structure of coral allene oxide synthase reveals a catalase adapted for metabolism of a fatty acid hydroperoxide. Proc.Natl.Acad.Sci.USA, 102, 2005
1WB0	specificity and affinity of natural product cyclopentapeptide inhibitor Argifin against human chitinase Descriptor: ARGIFIN, CHITOTRIOSIDASE 1, GLYCEROL, ... Authors: Rao, F.V, Houston, D.R, Boot, R.G, Aerts, J.M.F.G, Hodkinson, M, Adams, D.J, Shiomi, K, Omura, S, Van Aalten, D.M.F. Deposit date: 2004-10-29 Release date: 2005-01-28 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (1.65 Å) Cite: Specificity and Affinity of Natural Product Cyclopentapeptide Inhibitors Against Aspergillus Fumigatus, Human and Bacterial Chitinases Chem.Biol., 12, 2005
2DQ0	Crystal structure of seryl-tRNA synthetase from Pyrococcus horikoshii complexed with a seryl-adenylate analog Descriptor: 5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE, SULFATE ION, Seryl-tRNA synthetase Authors: Itoh, Y, Sekine, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2006-05-18 Release date: 2007-06-05 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Crystallographic and mutational studies of seryl-tRNA synthetase from the archaeon Pyrococcus horikoshii. Rna Biol., 5, 2008
1UCB	STRUCTURE OF UNCOMPLEXED FAB COMPARED TO COMPLEX (1CLY, 1CLZ) Descriptor: CHIMERIC HUMAN/MOUSE IGG FAB FRAGMENT BR96, SULFATE ION Authors: Sheriff, S, Bajorath, J. Deposit date: 1996-02-06 Release date: 1997-03-12 Last modified: 2023-08-09 Method: X-RAY DIFFRACTION (2.5 Å) Cite: X-ray structure of the uncomplexed anti-tumor antibody BR96 and comparison with its antigen-bound form. J.Mol.Biol., 259, 1996
1WAC	Back-priming mode of Phi6 RNA-dependent RNA polymerase Descriptor: P2 PROTEIN Authors: Laurila, M.R.L, Salgado, P.S, Stuart, D.I, Grimes, J.M, Bamford, D.H. Deposit date: 2004-10-26 Release date: 2005-01-27 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (3 Å) Cite: Back-Priming Mode of Phi6 RNA-Dependent RNA Polymerase J.Gen.Virol., 86, 2005
2DQT	High resolution crystal structure of the complex of the hydrolytic antibody Fab 6D9 and a transition-state analog Descriptor: IMMUNOGLOBULIN 6D9, [1-(3-DIMETHYLAMINO-PROPYL)-3-ETHYL-UREIDO]-[4-(2,2,2-TRIFLUORO-ACETYLAMINO)-BENZYL]PHOSPHINIC ACID-2-(2,2-DIHYDRO-ACETYLAMINO)-3-HYDROXY-1-(4-NITROPHENYL)-PROPYL ESTER Authors: Kristensen, O, Vassylyev, D.G, Tanaka, F, Ito, N, Morikawa, K, Fujii, I. Deposit date: 2006-05-30 Release date: 2006-06-20 Last modified: 2024-10-23 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Thermodynamic and structural basis for transition-state stabilization in antibody-catalyzed hydrolysis J.Mol.Biol., 369, 2007
1W68	Crystal Structure of Mouse Ribonucleotide Reductase Subunit R2 under Oxidizing Conditions. A Fully Occupied Dinuclear Iron Cluster. Descriptor: MU-OXO-DIIRON, RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE M2 CHAIN Authors: Karlsen, S, Strand, K.R, Kolberg, M, Rohr, A.K, Gorbitz, C.H, Andersson, K.K. Deposit date: 2004-08-16 Release date: 2004-08-26 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Crystal Structural Studies of Changes in the Native Dinuclear Iron Center of Ribonucleotide Reductase Protein R2 from Mouse J.Biol.Chem., 279, 2004
2DL2	KILLER IMMUNOGLOBULIN RECEPTOR 2DL2 Descriptor: PROTEIN (MHC CLASS I NK CELL RECEPTOR PRECURSOR (P58 NATURAL KILLER CELL RECEPTOR CLONE CL-43)) Authors: Sun, P, Snyder, G. Deposit date: 1999-03-08 Release date: 1999-03-30 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (3 Å) Cite: Crystal structure of the HLA-Cw3 allotype-specific killer cell inhibitory receptor KIR2DL2 Proc.Natl.Acad.Sci.USA, 96, 1999
1UDQ	Crystal structure of the tRNA processing enzyme RNase PH T125A mutant from Aquifex aeolicus Descriptor: PHOSPHATE ION, Ribonuclease PH, SULFATE ION Authors: Ishii, R, Nureki, O, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2003-05-02 Release date: 2003-09-23 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Crystal Structure of the tRNA Processing Enzyme RNase PH from Aquifex aeolicus J.Biol.Chem., 278, 2003
2DR7	Complex structure of CCA-adding enzyme with tRNAminiDC Descriptor: CCA-adding enzyme, SULFATE ION, tRNA (33-MER) Authors: Tomita, K, Ishitani, R, Fukai, S, Nureki, O. Deposit date: 2006-06-08 Release date: 2006-11-14 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Complete crystallographic analysis of the dynamics of CCA sequence addition Nature, 443, 2006
2DRI	PROBING PROTEIN-PROTEIN INTERACTIONS: THE RIBOSE BINDING PROTEIN IN BACTERIAL TRANSPORT AND CHEMOTAXIS Descriptor: D-RIBOSE-BINDING PROTEIN, beta-D-ribopyranose Authors: Mowbray, S.L, Cole, L.B. Deposit date: 1994-09-23 Release date: 1995-01-26 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Probing protein-protein interactions. The ribose-binding protein in bacterial transport and chemotaxis. J.Biol.Chem., 269, 1994
2DRU	Crystal structure and binding properties of the CD2 and CD244 (2B4) binding protein, CD48 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, chimera of CD48 antigen and T-cell surface antigen CD2 Authors: Evans, E.J, Ikemizu, S, Davis, S.J. Deposit date: 2006-06-15 Release date: 2006-07-04 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Crystal Structure and Binding Properties of the CD2 and CD244 (2B4)-binding Protein, CD48 J.Biol.Chem., 281, 2006
1U7B	Crystal structure of hPCNA bound to residues 331-350 of the flap endonuclease-1 (FEN1) Descriptor: Proliferating cell nuclear antigen, SRQGSTQGRLDDFFKVTGSL peptide of Flap endonuclease-1 Authors: Bruning, J.B, Shamoo, Y. Deposit date: 2004-08-03 Release date: 2004-12-14 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.88 Å) Cite: Structural and Thermodynamic Analysis of Human PCNA with Peptides Derived from DNA Polymerase-delta p66 Subunit and Flap Endonuclease-1. Structure, 12, 2004
1W9P	Specificity and affinity of natural product cyclopentapeptide inhibitors against Aspergillus fumigatus, human and bacterial chitinaseFra Descriptor: CHITINASE, SULFATE ION Authors: Rao, F.V, Houston, D.R, Boot, R.G, Aerts, J.M.F.G, Hodkinson, M, Adams, D.J, Shiomi, K, Omura, S, Van Aalten, D.M.F. Deposit date: 2004-10-15 Release date: 2004-10-29 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Specificity and Affinity of Natural Product Cyclopentapeptide Inhibitors Against Aspergillus Fumigatus, Human and Bacterial Chitinases Chem.Biol., 12, 2005
1UEU	Divergent evolutions of trinucleotide polymerization revealed by an archaeal CCA-adding enzyme structure Descriptor: ACETATE ION, CYTIDINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... Authors: Nureki, O, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2003-05-21 Release date: 2003-12-02 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2 Å) Cite: Divergent evolutions of trinucleotide polymerization revealed by an archaeal CCA-adding enzyme structure. Embo J., 22, 2003
2DSI	Crystal structure of Glu171 to Arg mutant of Diphthine synthase Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, ... Authors: Mizutani, H, Matsuura, Y, Saraboji, K, Malathy Sony, S.M, Ponnuswamy, M.N, Kumarevel, T.S, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2006-06-30 Release date: 2006-12-30 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Crystal structure of diphthine synthase from Pyrococcus horikoshii OT3 To be Published
2DTM	Thermodynamic and structural analyses of hydrolytic mechanism by catalytic antibodies Descriptor: IMMUNOGLOBULIN 6D9 Authors: Oda, M, Ito, N, Tsumuraya, T, Suzuki, K, Fujii, I. Deposit date: 2006-07-13 Release date: 2007-05-29 Last modified: 2024-10-30 Method: X-RAY DIFFRACTION (2.25 Å) Cite: Thermodynamic and structural basis for transition-state stabilization in antibody-catalyzed hydrolysis J.Mol.Biol., 369, 2007
1VIE	STRUCTURE OF DIHYDROFOLATE REDUCTASE Descriptor: DIHYDROFOLATE REDUCTASE Authors: Narayana, N, Matthews, D.A, Howell, E.E, Xuong, N.-H. Deposit date: 1996-10-03 Release date: 1997-10-22 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.7 Å) Cite: A plasmid-encoded dihydrofolate reductase from trimethoprim-resistant bacteria has a novel D2-symmetric active site. Nat.Struct.Biol., 2, 1995
1U8E	HUMAN DIPEPTIDYL PEPTIDASE IV/CD26 MUTANT Y547F Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Bjelke, J.R, Christensen, J, Branner, S, Wagtmann, N, Olsen, C, Kanstrup, A.B, Rasmussen, H.B. Deposit date: 2004-08-05 Release date: 2004-08-17 Last modified: 2024-10-30 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Tyrosine 547 constitutes an essential part of the catalytic mechanism of dipeptidyl peptidase IV J.Biol.Chem., 279, 2004
1VCP	SEMLIKI FOREST VIRUS CAPSID PROTEIN (CRYSTAL FORM I) Descriptor: MERCURY (II) ION, SEMLIKI FOREST VIRUS CAPSID PROTEIN Authors: Lu, G, Choi, H.-K, Rossmann, M.G. Deposit date: 1996-03-04 Release date: 1996-12-07 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (3 Å) Cite: Structure of Semliki Forest virus core protein. Proteins, 27, 1997
1VIN	BOVINE CYCLIN A3 Descriptor: CYCLIN A Authors: Noble, M.E.M, Endicott, J.A.E, Brown, N.R. Deposit date: 1996-03-15 Release date: 1996-08-17 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2 Å) Cite: The crystal structure of cyclin A. Structure, 3, 1995
1VUB	CCDB, A TOPOISOMERASE POISON FROM E. COLI Descriptor: CCDB, CHLORIDE ION Authors: Loris, R, Dao-Thi, M.-H, Bahasi, E.M, Van Melderen, L, Poortmans, F, Liddington, R, Couturier, M, Wyns, L. Deposit date: 1998-04-17 Release date: 1998-07-15 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Crystal structure of CcdB, a topoisomerase poison from E. coli. J.Mol.Biol., 285, 1999
1VFR	THE MAJOR NAD(P)H:FMN OXIDOREDUCTASE FROM VIBRIO FISCHERI Descriptor: FLAVIN MONONUCLEOTIDE, NAD(P)H:FMN OXIDOREDUCTASE Authors: Koike, H, Sasaki, H, Kobori, T, Zenno, S, Saigo, K, Murphy, M.E.P, Adman, E.T, Tanokura, M. Deposit date: 1998-01-09 Release date: 1999-02-16 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.8 Å) Cite: 1.8 A crystal structure of the major NAD(P)H:FMN oxidoreductase of a bioluminescent bacterium, Vibrio fischeri: overall structure, cofactor and substrate-analog binding, and comparison with related flavoproteins. J.Mol.Biol., 280, 1998

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