Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1JL2
DownloadVisualize
BU of 1jl2 by Molmil
Crystal structure of TCEO RNase H-a chimera combining the folding core from T. thermophilus RNase H and the remaining region of E. coli RNase H
Descriptor: Chimera of Ribonuclease HI, Ribonuclease H
Authors:Robic, S, Berger, J.M, Marqusee, S.
Deposit date:2001-07-13
Release date:2002-01-18
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Contributions of folding cores to the thermostabilities of two ribonucleases H.
Protein Sci., 11, 2002
3R52
DownloadVisualize
BU of 3r52 by Molmil
Structure analysis of a wound-inducible lectin ipomoelin from sweet potato
Descriptor: CADMIUM ION, Ipomoelin, methyl alpha-D-glucopyranoside
Authors:Liu, K.L, Chang, W.C, Jeng, S.T, Cheng, Y.S.
Deposit date:2011-03-18
Release date:2012-03-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Ipomoelin, a jacalin-related lectin with a compact tetrameric association and versatile carbohydrate binding properties regulated by its N terminus.
Plos One, 7, 2012
3Q3F
DownloadVisualize
BU of 3q3f by Molmil
Engineering Domain-Swapped Binding Interfaces by Mutually Exclusive Folding: Insertion of Ubiquitin into position 103 of Barnase
Descriptor: Ribonuclease/Ubiquitin chimeric protein, SULFATE ION
Authors:Ha, J.-H, Karchin, J.M, Walker-Kopp, N, Huang, L.-S, Berry, E.A, Loh, S.N.
Deposit date:2010-12-21
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.169 Å)
Cite:Engineering domain-swapped binding interfaces by mutually exclusive folding.
J.Mol.Biol., 416, 2012
7M50
DownloadVisualize
BU of 7m50 by Molmil
Crystallographic structure of a cubic crystal form of STMV grown from ammonium sulfate
Descriptor: CHLORIDE ION, Coat protein, MAGNESIUM ION, ...
Authors:McPherson, A.
Deposit date:2021-03-22
Release date:2021-12-15
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structures of additional crystal forms of Satellite tobacco mosaic virus grown from a variety of salts.
Acta Crystallogr.,Sect.F, 77, 2021
2BBL
DownloadVisualize
BU of 2bbl by Molmil
NMR structures of the peptide linked to the genome (VPg) of poliovirus in a stabilizing solvent
Descriptor: Genome linked protein VPg
Authors:Schein, C.H, Oezguen, N.
Deposit date:2005-10-17
Release date:2006-03-28
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR structure of the viral peptide linked to the genome (VPg) of poliovirus.
Peptides, 27, 2006
1KD3
DownloadVisualize
BU of 1kd3 by Molmil
The Crystal Structure of r(GGUCACAGCCC)2, Thallium form
Descriptor: 5'-R(*GP*GP*UP*CP*AP*CP*AP*GP*CP*CP*C)-3', THALLIUM (I) ION
Authors:Kacer, V, Scaringe, S.A, Scarsdale, J.N, Rife, J.P.
Deposit date:2001-11-12
Release date:2003-03-04
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of r(GGUCACAGCCC)2.
Acta Crystallogr.,Sect.D, 59, 2003
1KD4
DownloadVisualize
BU of 1kd4 by Molmil
The Crystal Structure of r(GGUCACAGCCC)2, Barium form
Descriptor: 5'-R(*GP*GP*UP*CP*AP*CP*AP*GP*CP*CP*C)-3', BARIUM ION
Authors:Kacer, V, Scaringe, S.A, Scarsdale, J.N, Rife, J.P.
Deposit date:2001-11-12
Release date:2003-03-04
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structures of r(GGUCACAGCCC)2.
Acta Crystallogr.,Sect.D, 59, 2003
5XOW
DownloadVisualize
BU of 5xow by Molmil
Crystal structure of T. thermophilus Argonaute protein complexed with a bulge 6'A7' on the target strand
Descriptor: DNA (5'-D(P*(TD)P*GP*AP*GP*GP*TP*AP*GP*TP*AP*GP*GP*TP*TP*GP*TP*AP*TP*AP*GP*T)-3'), MAGNESIUM ION, RNA (5'-R(P*UP*AP*CP*AP*AP*CP*CP*UP*AP*CP*UP*AP*AP*CP*CP*UP*CP*G)-3'), ...
Authors:Sheng, G, Wang, J, Zhao, H, Wang, Y.
Deposit date:2017-05-31
Release date:2017-10-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.902 Å)
Cite:Structure/cleavage-based insights into helical perturbations at bulge sites within T. thermophilus Argonaute silencing complexes
Nucleic Acids Res., 45, 2017
5XPA
DownloadVisualize
BU of 5xpa by Molmil
Crystal structure of T. thermophilus Argonaute protein complexed with a bulge 9'U10' on the target strand
Descriptor: DNA (5'-D(P*TP*GP*AP*GP*GP*TP*AP*GP*TP*AP*GP*GP*TP*TP*GP*TP*AP*TP*AP*GP*T)-3'), MAGNESIUM ION, RNA (5'-R(P*AP*UP*AP*CP*AP*AP*CP*CP*GP*UP*UP*CP*UP*AP*CP*UP*CP*CP*G)-3'), ...
Authors:Sheng, G, Gogakos, T, Wang, J, Zhao, H, Serganov, A, Juranek, S, Tuschl, T, Patel, J.D, Wang, Y.
Deposit date:2017-06-01
Release date:2018-04-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure/cleavage-based insights into helical perturbations at bulge sites within T. thermophilus Argonaute silencing complexes.
Nucleic Acids Res., 45, 2017
3UB2
DownloadVisualize
BU of 3ub2 by Molmil
TIR domain of Mal/TIRAP
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Toll/interleukin-1 receptor domain-containing adapter protein
Authors:Shen, Y, Lin, Z.
Deposit date:2011-10-23
Release date:2012-05-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Insights into TIR Domain Specificity of the Bridging Adaptor Mal in TLR4 Signaling
Plos One, 7, 2012
3F4E
DownloadVisualize
BU of 3f4e by Molmil
Crystal structure of the FMN riboswitch bound to FMN, split RNA.
Descriptor: FLAVIN MONONUCLEOTIDE, FMN riboswitch, MAGNESIUM ION, ...
Authors:Serganov, A.A, Huang, L.
Deposit date:2008-10-31
Release date:2009-01-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Coenzyme recognition and gene regulation by a flavin mononucleotide riboswitch.
Nature, 458, 2009
3O8V
DownloadVisualize
BU of 3o8v by Molmil
Crystal Structure of the Tudor Domains from FXR1
Descriptor: Fragile X mental retardation syndrome-related protein 1
Authors:Lam, R, Guo, Y.H, Adams-Cioaba, M, Bian, C.B, Mackenzie, F, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2010-08-03
Release date:2010-08-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Studies of the Tandem Tudor Domains of Fragile X Mental Retardation Related Proteins FXR1 and FXR2.
Plos One, 5, 2010
3V2P
DownloadVisualize
BU of 3v2p by Molmil
COMPcc in complex with fatty acids
Descriptor: Cartilage Oligomerization matrix protein (coiled-coil domain), STEARIC ACID
Authors:Stetefeld, J.
Deposit date:2011-12-12
Release date:2013-01-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.873 Å)
Cite:The pentameric channel of COMPcc in complex with different fatty acids.
Plos One, 7, 2012
3V2N
DownloadVisualize
BU of 3v2n by Molmil
COMPcc in complex with fatty acids
Descriptor: Cartilage Oligomerization matrix protein (coiled-coil domain), MYRISTIC ACID
Authors:Stetefeld, J.
Deposit date:2011-12-12
Release date:2013-01-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The pentameric channel of COMPcc in complex with different fatty acids.
Plos One, 7, 2012
2QKM
DownloadVisualize
BU of 2qkm by Molmil
The crystal structure of fission yeast mRNA decapping enzyme Dcp1-Dcp2 complex
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, SPAC19A8.12 protein, SPBC3B9.21 protein
Authors:She, M, Song, H.
Deposit date:2007-07-11
Release date:2008-04-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis of dcp2 recognition and activation by dcp1.
Mol.Cell, 29, 2008
2QKL
DownloadVisualize
BU of 2qkl by Molmil
The crystal structure of fission yeast mRNA decapping enzyme Dcp1-Dcp2 complex
Descriptor: LEAD (II) ION, SPAC19A8.12 protein, SPBC3B9.21 protein
Authors:She, M, Chen, N, Song, H.
Deposit date:2007-07-11
Release date:2008-03-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Structural basis of dcp2 recognition and activation by dcp1.
Mol.Cell, 29, 2008
3V2Q
DownloadVisualize
BU of 3v2q by Molmil
COMPcc in complex with fatty acids
Descriptor: Cartilage Oligomerization matrix protein (coiled-coil domain), PALMITIC ACID
Authors:Stetefeld, J.
Deposit date:2011-12-12
Release date:2013-01-16
Last modified:2013-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The pentameric channel of COMPcc in complex with different fatty acids.
Plos One, 7, 2012
2FR5
DownloadVisualize
BU of 2fr5 by Molmil
Crystal Structure of Mouse Cytidine Deaminase Complexed with Tetrahydrouridine
Descriptor: Cytidine deaminase, SULFATE ION, TETRAHYDROURIDINE, ...
Authors:Teh, A.H.
Deposit date:2006-01-19
Release date:2006-07-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:The 1.48 A Resolution Crystal Structure of the Homotetrameric Cytidine Deaminase from Mouse
Biochemistry, 45, 2006
4WYM
DownloadVisualize
BU of 4wym by Molmil
Structural basis of HIV-1 capsid recognition by CPSF6
Descriptor: Capsid protein p24, ISOFORM 2 OF CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6
Authors:Battacharya, A, Taylor, A.B, Hart, P.J, Ivanov, D.N.
Deposit date:2014-11-17
Release date:2014-12-17
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis of HIV-1 capsid recognition by PF74 and CPSF6.
Proc.Natl.Acad.Sci.USA, 111, 2014
5AFQ
DownloadVisualize
BU of 5afq by Molmil
Crystal structure of RPC62 - RPC32 beta
Descriptor: DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC3, RPC32 BETA (RPC7L)
Authors:Fribourg, S.
Deposit date:2015-01-23
Release date:2015-10-07
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (7 Å)
Cite:Structural Analysis of Human Rpc32Beta - Rpc62 Complex.
J.Struct.Biol., 192, 2015
7DWH
DownloadVisualize
BU of 7dwh by Molmil
Complex structure of SAM-dependent methyltransferase ribozyme
Descriptor: COPPER (II) ION, RNA (45-MER), S-ADENOSYLMETHIONINE, ...
Authors:Jiang, H.Y, Gao, Y.Q, Chen, D.R, Murchie, A.
Deposit date:2021-01-17
Release date:2021-10-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:The identification and characterization of a selected SAM-dependent methyltransferase ribozyme that is present in natural sequences
Nat Catal, 4, 2021
4Q8H
DownloadVisualize
BU of 4q8h by Molmil
Structure of the Saccharomyces cerevisiae PAN2 pseudoubiquitin-hydrolase-RNase module
Descriptor: MAGNESIUM ION, PAB-dependent poly(A)-specific ribonuclease subunit PAN2
Authors:Schaefer, I.B, Conti, E.
Deposit date:2014-04-27
Release date:2014-06-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:The structure of the Pan2-Pan3 core complex reveals cross-talk between deadenylase and pseudokinase.
Nat.Struct.Mol.Biol., 21, 2014
3SUX
DownloadVisualize
BU of 3sux by Molmil
Crystal structure of THF riboswitch, bound with THF
Descriptor: 5-HYDROXYMETHYLENE-6-HYDROFOLIC ACID, Riboswitch, SODIUM ION
Authors:Huang, L, Serganov, A, Patel, D.J.
Deposit date:2011-07-11
Release date:2011-09-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Long-range pseudoknot interactions dictate the regulatory response in the tetrahydrofolate riboswitch.
Proc.Natl.Acad.Sci.USA, 108, 2011
3SUY
DownloadVisualize
BU of 3suy by Molmil
Crystal structure of THF riboswitch, unbound status
Descriptor: riboswitch
Authors:Huang, L, Serganov, A, Patel, D.J.
Deposit date:2011-07-11
Release date:2011-09-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.21 Å)
Cite:Long-range pseudoknot interactions dictate the regulatory response in the tetrahydrofolate riboswitch.
Proc.Natl.Acad.Sci.USA, 108, 2011
2IHN
DownloadVisualize
BU of 2ihn by Molmil
Co-crystal of Bacteriophage T4 RNase H with a fork DNA substrate
Descriptor: 5'-D(*CP*TP*AP*AP*CP*TP*TP*TP*GP*AP*GP*GP*CP*AP*GP*AP*CP*C)-3', 5'-D(*GP*GP*TP*CP*TP*GP*CP*CP*TP*CP*AP*AP*GP*AP*CP*GP*GP*TP*AP*GP*TP*CP*AP*A)-3', Ribonuclease H
Authors:Devos, J.M, Mueser, T.C.
Deposit date:2006-09-26
Release date:2007-08-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of bacteriophage T4 5' nuclease in complex with a branched DNA reveals how FEN-1 family nucleases bind their substrates.
J.Biol.Chem., 282, 2007

222624

數據於2024-07-17公開中

PDB statisticsPDBj update infoContact PDBjnumon