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8D13
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BU of 8d13 by Molmil
Helical ADP-F-actin
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Reynolds, M.J, Alushin, G.M.
Deposit date:2022-05-26
Release date:2022-09-07
Last modified:2022-11-23
Method:ELECTRON MICROSCOPY (2.43 Å)
Cite:Bending forces and nucleotide state jointly regulate F-actin structure.
Nature, 611, 2022
8A5I
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BU of 8a5i by Molmil
Cryo-EM structure of Lincomycin bound to the Listeria monocytogenes 50S ribosomal subunit.
Descriptor: 1,4-DIAMINOBUTANE, 23S ribosomal RNA, 50S ribosomal protein L13, ...
Authors:Koller, T.O, Crowe-McAuliffe, C, Wilson, D.N.
Deposit date:2022-06-15
Release date:2022-11-02
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Structural basis for HflXr-mediated antibiotic resistance in Listeria monocytogenes.
Nucleic Acids Res., 50, 2022
7T5Q
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BU of 7t5q by Molmil
Cryo-EM Structure of a Transition State of Arp2/3 Complex Activation
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Actin, ...
Authors:Rebowski, G, van Eeuwen, T, Boczkowska, M, Dominguez, R.
Deposit date:2021-12-13
Release date:2023-06-14
Last modified:2023-08-02
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM structure of an Arp2/3 complex mini-branch capped by capping protein (CapZ)
To Be Published
8CU7
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BU of 8cu7 by Molmil
Crystal structure of A2AAR-StaR2-bRIL in complex with a novel A2a antagonist, LJ-4517
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2R,3R,4R)-2-[(8P)-6-amino-2-(hex-1-yn-1-yl)-8-(thiophen-2-yl)-9H-purin-9-yl]oxolane-3,4-diol, Adenosine receptor A2a,Soluble cytochrome b562, ...
Authors:Shiriaeva, A, Park, D.-J, Kim, G, Lee, Y, Hou, X, Jarhad, D.B, Kim, G, Yu, J, Hyun, Y.E, Kim, W, Gao, Z.-G, Jacobson, K.A, Han, G.W, Stevens, R.C, Jeong, L.S, Choi, S, Cherezov, V.
Deposit date:2022-05-16
Release date:2022-08-31
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:GPCR Agonist-to-Antagonist Conversion: Enabling the Design of Nucleoside Functional Switches for the A 2A Adenosine Receptor.
J.Med.Chem., 65, 2022
7ZNQ
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BU of 7znq by Molmil
ABC transporter complex NosDFYL in GDN
Descriptor: COPPER (II) ION, Copper-binding lipoprotein NosL, MAGNESIUM ION, ...
Authors:Zhang, L, Mueller, C, Zipfel, S, Chami, M, Einsle, O.
Deposit date:2022-04-21
Release date:2022-08-03
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.04 Å)
Cite:Molecular interplay of an assembly machinery for nitrous oxide reductase.
Nature, 608, 2022
8CYB
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BU of 8cyb by Molmil
SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 1-8
Descriptor: 1-deoxy-alpha-D-mannopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Huang, W, Taylor, D.
Deposit date:2022-05-23
Release date:2022-07-06
Last modified:2022-07-13
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Superimmunity by pan-sarbecovirus nanobodies.
Cell Rep, 39, 2022
1YOO
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BU of 1yoo by Molmil
ASPARTATE AMINOTRANSFERASE MUTANT ATB17 WITH ISOVALERIC ACID
Descriptor: ASPARTATE AMINOTRANSFERASE, ISOVALERIC ACID, PYRIDOXAL-5'-PHOSPHATE
Authors:Oue, S, Okamoto, A, Yano, T, Kagamiyama, H.
Deposit date:1998-06-26
Release date:1999-02-02
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Redesigning the substrate specificity of an enzyme by cumulative effects of the mutations of non-active site residues.
J.Biol.Chem., 274, 1999
2JD5
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BU of 2jd5 by Molmil
Sky1p bound to Npl3p-derived substrate peptide
Descriptor: MAGNESIUM ION, NUCLEOLAR PROTEIN 3, SERINE/THREONINE-PROTEIN KINASE SKY1, ...
Authors:Nolen, B, Lukasiewicz, R, Adams, J.A, Huang, D, Ghosh, G.
Deposit date:2007-01-04
Release date:2007-02-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The Rgg Domain of Npl3P Recruits Sky1P Through Docking Interactions
J.Mol.Biol., 367, 2007
1YP2
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BU of 1yp2 by Molmil
Crystal structure of potato tuber ADP-glucose pyrophosphorylase
Descriptor: Glucose-1-phosphate adenylyltransferase small subunit, PARA-MERCURY-BENZENESULFONIC ACID, SULFATE ION
Authors:Jin, X, Ballicora, M.A, Preiss, J, Geiger, J.H.
Deposit date:2005-01-29
Release date:2005-03-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Crystal structure of potato tuber ADP-glucose pyrophosphorylase.
Embo J., 24, 2005
8D17
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BU of 8d17 by Molmil
Straight ADP-F-actin 1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Reynolds, M.J, Alushin, G.M.
Deposit date:2022-05-26
Release date:2022-09-07
Last modified:2022-11-23
Method:ELECTRON MICROSCOPY (3.69 Å)
Cite:Bending forces and nucleotide state jointly regulate F-actin structure.
Nature, 611, 2022
8D16
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BU of 8d16 by Molmil
Bent ADP-Pi-F-actin
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Reynolds, M.J, Alushin, G.M.
Deposit date:2022-05-26
Release date:2022-09-07
Last modified:2022-11-23
Method:ELECTRON MICROSCOPY (3.71 Å)
Cite:Bending forces and nucleotide state jointly regulate F-actin structure.
Nature, 611, 2022
1YPA
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BU of 1ypa by Molmil
DIRECT OBSERVATION OF BETTER HYDRATION AT THE N-TERMINUS OF AN ALPHA-HELIX WITH GLYCINE RATHER THAN ALANINE AS N-CAP
Descriptor: CHYMOTRYPSIN INHIBITOR 2
Authors:Harpaz, Y, Elmasry, N, Fersht, A.R, Henrick, K.
Deposit date:1993-01-10
Release date:1994-01-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Direct observation of better hydration at the N terminus of an alpha-helix with glycine rather than alanine as the N-cap residue.
Proc.Natl.Acad.Sci.USA, 91, 1994
8DKI
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BU of 8dki by Molmil
Cryo-EM structure of cystinosin in a lumen-open state
Descriptor: Fab 3H5 Heavy Chain, Fab 3H5 Kappa chain, Isoform 2 of Cystinosin
Authors:Schmiege, P, Li, X.
Deposit date:2022-07-05
Release date:2022-09-21
Last modified:2022-10-12
Method:ELECTRON MICROSCOPY (3.32 Å)
Cite:Structure and mechanism of human cystine exporter cystinosin.
Cell, 185, 2022
8D3Y
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BU of 8d3y by Molmil
Human alpha3 Na+/K+-ATPase in its exoplasmic side-open state
Descriptor: FXYD domain-containing ion transport regulator 6, Sodium/potassium-transporting ATPase subunit alpha-3, Sodium/potassium-transporting ATPase subunit beta-1
Authors:Nguyen, P.T, Bai, X.
Deposit date:2022-06-01
Release date:2022-09-21
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural basis for gating mechanism of the human sodium-potassium pump.
Nat Commun, 13, 2022
1YPP
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BU of 1ypp by Molmil
ACID ANHYDRIDE HYDROLASE
Descriptor: INORGANIC PYROPHOSPHATASE, MANGANESE (II) ION, PHOSPHATE ION
Authors:Harutyunyan, E.H, Kuranova, I.P, Lamzin, V.S, Dauter, Z, Wilson, K.S.
Deposit date:1996-05-29
Release date:1996-12-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:X-ray structure of yeast inorganic pyrophosphatase complexed with manganese and phosphate.
Eur.J.Biochem., 239, 1996
7ZQ9
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BU of 7zq9 by Molmil
Dimeric PSI of Chlamydomonas reinhardtii at 2.74 A resolution (symmetry expanded)
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Naschberger, A, Amunts, A.
Deposit date:2022-04-29
Release date:2022-11-23
Method:ELECTRON MICROSCOPY (2.74 Å)
Cite:Algal photosystem I dimer and high-resolution model of PSI-plastocyanin complex.
Nat.Plants, 8, 2022
8D3X
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BU of 8d3x by Molmil
Human alpha3 Na+/K+-ATPase in its K+-occluded state
Descriptor: FXYD domain-containing ion transport regulator 6, Sodium/potassium-transporting ATPase subunit alpha-3, Sodium/potassium-transporting ATPase subunit beta-1, ...
Authors:Nguyen, P.T, Bai, X.
Deposit date:2022-06-01
Release date:2022-09-21
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structural basis for gating mechanism of the human sodium-potassium pump.
Nat Commun, 13, 2022
8D4T
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BU of 8d4t by Molmil
Mammalian CIV with GDN bound
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE, (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, ...
Authors:Di Trani, J, Rubinstein, J.
Deposit date:2022-06-02
Release date:2022-07-06
Last modified:2022-08-24
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis of mammalian complex IV inhibition by steroids.
Proc.Natl.Acad.Sci.USA, 119, 2022
7ZKP
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BU of 7zkp by Molmil
Late assembly intermediate of the proximal proton pumping module of complex I with assembly factors NDUFAF1 and CIA84
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CARDIOLIPIN, ...
Authors:Schiller, J, Laube, E, Vonck, J, Zickermann, V.
Deposit date:2022-04-13
Release date:2022-11-23
Last modified:2022-11-30
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Insights into complex I assembly: Function of NDUFAF1 and a link with cardiolipin remodeling.
Sci Adv, 8, 2022
1YP3
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BU of 1yp3 by Molmil
Crystal structure of potato tuber ADP-glucose pyrophosphorylase in complex with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Glucose-1-phosphate adenylyltransferase small subunit, SULFATE ION
Authors:Jin, X, Ballicora, M.A, Preiss, J, Geiger, J.H.
Deposit date:2005-01-29
Release date:2005-03-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of potato tuber ADP-glucose pyrophosphorylase.
Embo J., 24, 2005
8D3U
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BU of 8d3u by Molmil
Human alpha3 Na+/K+-ATPase in its Na+-occluded state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, FXYD domain-containing ion transport regulator 6, Sodium/potassium-transporting ATPase subunit alpha-3, ...
Authors:Nguyen, P.T, Bai, X.
Deposit date:2022-06-01
Release date:2022-09-21
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural basis for gating mechanism of the human sodium-potassium pump.
Nat Commun, 13, 2022
8D3W
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BU of 8d3w by Molmil
Human alpha3 Na+/K+-ATPase in its AMPPCP-bound cytoplasmic side-open state
Descriptor: FXYD domain-containing ion transport regulator 6, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, Sodium/potassium-transporting ATPase subunit alpha-3, ...
Authors:Nguyen, P.T, Bai, X.
Deposit date:2022-06-01
Release date:2022-09-21
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural basis for gating mechanism of the human sodium-potassium pump.
Nat Commun, 13, 2022
7ZQC
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BU of 7zqc by Molmil
Monomeric PSI of Chlamydomonas reinhardtii at 2.31 A resolution
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Naschberger, A, Amunts, A.
Deposit date:2022-04-29
Release date:2022-11-23
Method:ELECTRON MICROSCOPY (2.31 Å)
Cite:Algal photosystem I dimer and high-resolution model of PSI-plastocyanin complex.
Nat.Plants, 8, 2022
8CY9
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BU of 8cy9 by Molmil
SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 1-23
Descriptor: Spike glycoprotein, pan-sarbecovirus nanobody 1-23
Authors:Huang, W, Taylor, D.
Deposit date:2022-05-23
Release date:2022-07-06
Last modified:2022-07-13
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Superimmunity by pan-sarbecovirus nanobodies.
Cell Rep, 39, 2022
1YUH
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BU of 1yuh by Molmil
FAB FRAGMENT
Descriptor: 4-HYDROXY-3-NITROPHENYLACETYL-EPSILON-AMINOCAPROIC ACID, 88C6/12 FAB (HEAVY CHAIN), 88C6/12 FAB (LIGHT CHAIN)
Authors:Yuhasz, S.C, Amzel, L.M, Parry, C, Strand, M.
Deposit date:1996-01-30
Release date:1996-07-11
Last modified:2018-03-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural analysis of affinity maturation: the three-dimensional structures of complexes of an anti-nitrophenol antibody.
Mol.Immunol., 32, 1995

224572

數據於2024-09-04公開中

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