PDB: 47065 resultsInfo pagesStatus searchChemie searchBIRD

---

8RAS	Plastid-encoded RNA polymerase transcription elongation complex Descriptor: DNA (81-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... Authors: Webster, M.W, Pramanick, I, Vergara-Cruces, A. Deposit date: 2023-12-01 Release date: 2024-03-06 Last modified: 2024-03-13 Method: ELECTRON MICROSCOPY (2.62 Å) Cite: Structure of the plant plastid-encoded RNA polymerase. Cell, 187, 2024
6VFS	ClpXP from Neisseria meningitidis - Conformation A Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpX, ... Authors: Ripstein, Z.A, Vahidi, S, Houry, W.A, Rubinstein, J.L, Kay, L.E. Deposit date: 2020-01-06 Release date: 2020-01-22 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: A processive rotary mechanism couples substrate unfolding and proteolysis in the ClpXP degradation machinery. Elife, 9, 2020
6UZA	Cryo-EM structure of human TRPC6 in complex with antagonist AM-1473 Descriptor: 2-[[(2~{S})-2-decanoyloxypropoxy]-oxidanyl-phosphoryl]oxyethyl-trimethyl-azanium, 4-({(1R,2R)-2-[(3R)-3-aminopiperidin-1-yl]-2,3-dihydro-1H-inden-1-yl}oxy)benzonitrile, CHOLESTEROL HEMISUCCINATE, ... Authors: Bai, Y, Yu, X, Huang, X, Chen, H. Deposit date: 2019-11-14 Release date: 2020-03-18 Method: ELECTRON MICROSCOPY (3.08 Å) Cite: Structural basis for pharmacological modulation of the TRPC6 channel. Elife, 9, 2020
6V4X	Cryo-EM structure of an active human histone pre-mRNA 3'-end processing machinery at 3.2 Angstrom resolution Descriptor: Cleavage and polyadenylation specificity factor subunit 2, Cleavage and polyadenylation specificity factor subunit 3, Small nuclear ribonucleoprotein E, ... Authors: Sun, Y, Zhang, Y, Walz, T, Tong, L. Deposit date: 2019-12-02 Release date: 2020-02-19 Last modified: 2024-05-29 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Structure of an active human histone pre-mRNA 3'-end processing machinery. Science, 367, 2020
8RHJ	Yeast 20S proteasome in complex with a macrocyclic oxindole epoxyketone (compound 5) Descriptor: CHLORIDE ION, MAGNESIUM ION, Macrocyclic oxindole epoxyketone, ... Authors: Goetz, M.G, Godwin, K, Price, R, Dorn, R, Merrill-Steskal, G, Hansen, H, Klemmer, W, Produturi, G, Rocha, M, Palmer, M, Molacek, L, Strater, Z, Groll, M. Deposit date: 2023-12-15 Release date: 2024-05-01 Method: X-RAY DIFFRACTION (3.05 Å) Cite: Macrocyclic Oxindole Peptide Epoxyketones-A Comparative Study of Macrocyclic Inhibitors of the 20S Proteasome. Acs Med.Chem.Lett., 15, 2024
8RHL	Yeast 20S proteasome in complex with a linear biarylether epoxyketone (compound 15a) Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, Linear biarylether epoxyketone, ... Authors: Goetz, M.G, Godwin, K, Price, R, Dorn, R, Merrill-Steskal, G, Hansen, H, Klemmer, W, Produturi, G, Rocha, M, Palmer, M, Molacek, L, Strater, Z, Groll, M. Deposit date: 2023-12-15 Release date: 2024-05-01 Method: X-RAY DIFFRACTION (3.2 Å) Cite: Macrocyclic Oxindole Peptide Epoxyketones-A Comparative Study of Macrocyclic Inhibitors of the 20S Proteasome. Acs Med.Chem.Lett., 15, 2024
8RHK	Yeast 20S proteasome in complex with a linear oxindole epoxyketone (compound 6) Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, Linear oxindole epoxyketone, ... Authors: Goetz, M.G, Godwin, K, Price, R, Dorn, R, Merrill-Steskal, G, Hansen, H, Klemmer, W, Produturi, G, Rocha, M, Palmer, M, Molacek, L, Strater, Z, Groll, M. Deposit date: 2023-12-15 Release date: 2024-05-01 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Macrocyclic Oxindole Peptide Epoxyketones-A Comparative Study of Macrocyclic Inhibitors of the 20S Proteasome. Acs Med.Chem.Lett., 15, 2024
8PID	backtracked E. coli transcription complex paused at ops site and bound to RfaH Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... Authors: Zuber, P.K, Said, N, Hilal, T, Loll, B, Wahl, M.C, Knauer, S.H. Deposit date: 2023-06-21 Release date: 2024-04-24 Method: ELECTRON MICROSCOPY (3 Å) Cite: Concerted transformation of a hyper-paused transcription complex and its reinforcing protein. Nat Commun, 15, 2024
8PIM	fully recruited RfaH bound to E. coli transcription complex paused at ops site (not complementary scaffold) Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... Authors: Zuber, P.K, Said, N, Hilal, T, Loll, B, Wahl, M.C, Knauer, S.H. Deposit date: 2023-06-22 Release date: 2024-04-24 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Concerted transformation of a hyper-paused transcription complex and its reinforcing protein. Nat Commun, 15, 2024
8QAV	Medicago truncatula HISN5 (IGPD) in complex with MN and IG2 Descriptor: (2S,3S)-2,3-dihydroxy-3-(1H-imidazol-5-yl)propyl dihydrogen phosphate, Imidazoleglycerol-phosphate dehydratase, MANGANESE (II) ION Authors: Witek, W, Ruszkowski, M. Deposit date: 2023-08-23 Release date: 2024-04-10 Method: ELECTRON MICROSCOPY (2.23 Å) Cite: Targeting imidazole-glycerol phosphate dehydratase in plants: novel approach for structural and functional studies, and inhibitor blueprinting. Front Plant Sci, 15, 2024
8PH9	E. coli RNA polymerase paused at ops site (non-complementary scaffold) Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... Authors: Zuber, P.K, Said, N, Hilal, T, Loll, B, Wahl, M.C, Knauer, S.H. Deposit date: 2023-06-19 Release date: 2024-04-24 Method: ELECTRON MICROSCOPY (3 Å) Cite: Concerted transformation of a hyper-paused transcription complex and its reinforcing protein. Nat Commun, 15, 2024
8PHK	fully recruited RfaH bound to E. coli transcription complex paused at ops site Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... Authors: Zuber, P.K, Said, N, Hilal, T, Loll, B, Wahl, M.C, Knauer, S.H. Deposit date: 2023-06-20 Release date: 2024-04-24 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Concerted transformation of a hyper-paused transcription complex and its reinforcing protein. Nat Commun, 15, 2024
6VE2	Tetradecameric PilQ bound by TsaP heptamer from Pseudomonas aeruginosa Descriptor: Fimbrial assembly protein PilQ, LysM domain-containing protein Authors: McCallum, M, Tammam, S, Rubinstein, J.L, Burrows, L.L, Howell, P.L. Deposit date: 2019-12-28 Release date: 2020-12-23 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (4.3 Å) Cite: CryoEM map of Pseudomonas aeruginosa PilQ enables structural characterization of TsaP. Structure, 29, 2021
6VE3	Tetradecameric PilQ from Pseudomonas aeruginosa Descriptor: Fimbrial assembly protein PilQ Authors: McCallum, M, Tammam, S, Rubinstein, J.L, Burrows, L.L, Howell, P.L. Deposit date: 2019-12-28 Release date: 2020-12-23 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (4.3 Å) Cite: CryoEM map of Pseudomonas aeruginosa PilQ enables structural characterization of TsaP. Structure, 29, 2021
6VMB	Chloroplast ATP synthase (C1, CF1FO) Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase delta chain, ... Authors: Yang, J.-H, Williams, D, Kandiah, E, Fromme, P, Chiu, P.-L. Deposit date: 2020-01-27 Release date: 2020-09-09 Last modified: 2020-09-16 Method: ELECTRON MICROSCOPY (5.23 Å) Cite: Structural basis of redox modulation on chloroplast ATP synthase. Commun Biol, 3, 2020
6VNW	Cryo-EM structure of apo-BBSome Descriptor: BBS1 domain-containing protein, Bardet-Biedl syndrome 18 protein, Bardet-Biedl syndrome 2 protein homolog, ... Authors: Yang, S, Walz, T, Nachury, M, Chou, H. Deposit date: 2020-01-29 Release date: 2020-07-01 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (3.44 Å) Cite: Near-atomic structures of the BBSome reveal the basis for BBSome activation and binding to GPCR cargoes. Elife, 9, 2020
6VPA	Scabin (N110A) toxin from Streptomyces scabies Descriptor: Scabin Authors: Lyons, B, Lidster, T, Merrill, A.R. Deposit date: 2020-02-02 Release date: 2021-01-13 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Mapping the DNA-Binding Motif of Scabin Toxin, a Guanine Modifying Enzyme from Streptomyces scabies . Toxins, 13, 2021
6VOJ	Chloroplast ATP synthase (R3, CF1FO) Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase delta chain, ... Authors: Yang, J.-H, Williams, D, Kandiah, E, Fromme, P, Chiu, P.-L. Deposit date: 2020-01-30 Release date: 2020-09-09 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (4.34 Å) Cite: Structural basis of redox modulation on chloroplast ATP synthase. Commun Biol, 3, 2020
8PEN	fully recruited RfaH bound to E. coli transcription complex paused at ops site (alternative state of RfaH) Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... Authors: Zuber, P.K, Said, N, Hilal, T, Loll, B, Wahl, M.C, Knauer, S.H. Deposit date: 2023-06-14 Release date: 2024-04-24 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Concerted transformation of a hyper-paused transcription complex and its reinforcing protein. Nat Commun, 15, 2024
6VJI	Structure of mammalian NEIL2 from Monodelphis domestica Descriptor: Nei like DNA glycosylase 2, ZINC ION Authors: Eckenroth, B.E, Doublie, S. Deposit date: 2020-01-16 Release date: 2020-08-12 Last modified: 2021-01-20 Method: X-RAY DIFFRACTION (2.54 Å) Cite: Unique Structural Features of Mammalian NEIL2 DNA Glycosylase Prime Its Activity for Diverse DNA Substrates and Environments. Structure, 29, 2021
6VXC	Crystal structure of hydroxyproline dehydratase (HypD) from Clostridioides difficile Descriptor: GLYCEROL, Trans-4-hydroxy-L-proline dehydratase Authors: Backman, L.R.F, Drennan, C.L. Deposit date: 2020-02-21 Release date: 2020-04-08 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.05 Å) Cite: Molecular basis for catabolism of the abundant metabolitetrans-4-hydroxy-L-proline by a microbial glycyl radical enzyme. Elife, 9, 2020
6VOF	Chloroplast ATP synthase (O2, CF1FO) Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase delta chain, ... Authors: Yang, J.-H, Williams, D, Kandiah, E, Fromme, P, Chiu, P.-L. Deposit date: 2020-01-30 Release date: 2020-09-09 Last modified: 2020-09-16 Method: ELECTRON MICROSCOPY (4.51 Å) Cite: Structural basis of redox modulation on chloroplast ATP synthase. Commun Biol, 3, 2020
8P0K	Cryo EM map and model of the vaccinia RNA polymerase intermediate pre-initiation open promoter complex, module 2 of capping enzyme mobile Descriptor: DNA-directed RNA polymerase 133 kDa polypeptide, DNA-directed RNA polymerase 147 kDa polypeptide, DNA-directed RNA polymerase 18 kDa subunit, ... Authors: Grimm, C, Jungwirth, S, Fischer, U. Deposit date: 2023-05-10 Release date: 2024-05-22 Method: ELECTRON MICROSCOPY (2.64 Å) Cite: Cryo EM map and model of the vaccinia RNA polymerase intermediate pre-initiation open promoter complex (CASP target) To Be Published
8P1S	Bifidobacterium asteroides alpha-L-fucosidase (TT1819) in complex with fucose. Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Bifidobacterium asteroides alpha-L-fucosidase (TT1819), ... Authors: Owen, C.D, Penner, M, Gascuena, A.N, Wu, H, Hernando, P.J, Monaco, S, Le Gall, G, Gardner, R, Ndeh, D, Urbanowicz, P.A, Spencer, D.I.R, Walsh, M.A, Angulo, J, Juge, N. Deposit date: 2023-05-12 Release date: 2024-05-22 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Exploring sequence, structure and function of microbial fucosidases from glycoside hydrolase GH29 family To Be Published
8RIT	Dimeric mutant S103D of the BTB domain of ZBTB8A from Xenopus laevis Descriptor: Zinc finger and BTB domain-containing protein 8A.1-A Authors: Coste, F, Suskiewicz, M.J. Deposit date: 2023-12-19 Release date: 2024-06-05 Method: X-RAY DIFFRACTION (3.75 Å) Cite: Dimeric mutant S103D of the BTB domain of ZBTB8A from Xenopus laevis To Be Published

<737738739740741742743744745746747748749750751752>