PDB: 31171 resultsInfo pagesStatus searchChemie searchBIRD

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5EV2	Structure II of Intact U2AF65 Recognizing the 3' Splice Site Signal Descriptor: 1,4-DIETHYLENE DIOXIDE, DI(HYDROXYETHYL)ETHER, DNA (5'-R(P*UP*U)-D(P*UP*U)-R(P*U)-D(P*UP*(BRU)P*U)-3'), ... Authors: Agrawal, A.A, Jenkins, J.L, Kielkopf, C.L. Deposit date: 2015-11-19 Release date: 2016-02-24 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (1.86 Å) Cite: An extended U2AF(65)-RNA-binding domain recognizes the 3' splice site signal. Nat Commun, 7, 2016
6NHE	Structure of rat neuronal nitric oxide synthase heme domain in complex with 6-(5-(2-((2S,4R)-4-ethoxy-1-methylpyrrolidin-2-yl)ethyl)-2,3-difluorophenethyl)-4-methylpyridin-2-amine Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, 6-[2-(5-{2-[(2S,4R)-4-ethoxy-1-methylpyrrolidin-2-yl]ethyl}-2,3-difluorophenyl)ethyl]-4-methylpyridin-2-amine, ACETATE ION, ... Authors: Li, H, Poulos, T.L. Deposit date: 2018-12-21 Release date: 2019-03-13 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.999 Å) Cite: Optimization of Blood-Brain Barrier Permeability with Potent and Selective Human Neuronal Nitric Oxide Synthase Inhibitors Having a 2-Aminopyridine Scaffold. J. Med. Chem., 62, 2019
5EV3	Structure III of Intact U2AF65 Recognizing the 3' Splice Site Signal Descriptor: DNA/RNA (5'-R(P*UP*U)-D(P*U)-R(P*UP*U)-D(P*(BRU)P*UP*U)-3'), Splicing factor U2AF 65 kDa subunit Authors: Agrawal, A.A, Jenkins, J.L, Kielkopf, C.L. Deposit date: 2015-11-19 Release date: 2016-02-24 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (1.5 Å) Cite: An extended U2AF(65)-RNA-binding domain recognizes the 3' splice site signal. Nat Commun, 7, 2016
7O61	Crystal structure of the C-terminal PASTA domains of Staphylococcus aureus PBP1 Descriptor: Penicillin-binding protein 1 Authors: Rao, V.A, Lewis, R.J. Deposit date: 2021-04-09 Release date: 2022-04-20 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.78 Å) Cite: Crystal structure of the C-terminal PASTA domains of Staphylococcus aureus PBP1 To Be Published
8P5F	Human wild-type GAPDH,orthorhombic form Descriptor: ACETATE ION, Glyceraldehyde-3-phosphate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ... Authors: Samygina, V.R, Muronetz, V.I, Schmalhausen, E.V. Deposit date: 2023-05-24 Release date: 2023-07-05 Last modified: 2023-07-12 Method: X-RAY DIFFRACTION (1.82 Å) Cite: S-nitrosylation and S-glutathionylation of GAPDH: Similarities, differences, and relationships. Biochim Biophys Acta Gen Subj, 1867, 2023
7O2U	PqsR (MvfR) in complex with antagonist 40 Descriptor: 2-[4-[(2S)-3-(6-chloranyl-4-oxidanylidene-quinazolin-3-yl)-2-oxidanyl-propoxy]phenoxy]ethanenitrile, LysR family transcriptional regulator Authors: Emsley, J, Richardson, W. Deposit date: 2021-03-31 Release date: 2022-04-13 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (3 Å) Cite: PqsR (MvfR) in complex with antagonist 40 To Be Published
8OVH	Crystal structure of O-acetyl-L-homoserine sulfhydrolase from Saccharomyces cerevisiae in complex with Pyridoxal-5'-phosphate Descriptor: DI(HYDROXYETHYL)ETHER, Homocysteine/cysteine synthase, PYRIDOXAL-5'-PHOSPHATE Authors: Saleem-Batcha, R, Andexer, J.N, Mohr, M. Deposit date: 2023-04-26 Release date: 2023-06-21 Last modified: 2024-09-25 Method: X-RAY DIFFRACTION (2.171 Å) Cite: Enzymatic Synthesis of l-Methionine Analogues and Application in a Methyltransferase Catalysed Alkylation Cascade. Chemistry, 29, 2023
5EUU	Rat prestin STAS domain in complex with chloride Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Prestin,Prestin, ... Authors: Lolli, G, Pasqualetto, E, Costanzi, E, Bonetto, G, Battistutta, R. Deposit date: 2015-11-19 Release date: 2015-12-16 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.87 Å) Cite: The STAS domain of mammalian SLC26A5 prestin harbours an anion-binding site. Biochem.J., 473, 2016
6NI8	Pseudomonas fluorescens isocyanide hydratase rotating anode 298K Descriptor: Isonitrile hydratase InhA Authors: Wilson, M.A, Dasgupta, M, van den Bedem, H. Deposit date: 2018-12-26 Release date: 2020-01-08 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.45 Å) Cite: Cysteine modification can gate non-equilibrium conformational dynamics during enzyme catalysis Biorxiv, 2019
7O35	Crystal Structure of SARS-CoV-2 N-CTD in complex with GTP (I) Descriptor: GUANOSINE-5'-TRIPHOSPHATE, Nucleoprotein Authors: Ciges-Tomas, J.R, Vilar, M. Deposit date: 2021-04-01 Release date: 2022-04-13 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Identification of a guanine-specific pocket in the protein N of SARS-CoV-2. Commun Biol, 5, 2022
8OU8	Crystal structure of E. coli threonyl tRNA synthetase in complex with a TM84 analogue Descriptor: 1,2-ETHANEDIOL, DIMETHYL SULFOXIDE, Threonine--tRNA ligase, ... Authors: Rodriguez Buitrago, J.A, Parisini, E, Aigars, J. Deposit date: 2023-04-22 Release date: 2023-07-12 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.05 Å) Cite: Synthesis and evaluation of an agrocin 84 toxic moiety (TM84) analogue as a malarial threonyl tRNA synthetase inhibitor. Org.Biomol.Chem., 21, 2023
5EUS	Rat prestin STAS domain in complex with bromide Descriptor: 1,2-ETHANEDIOL, BROMIDE ION, Prestin,Rat prestin STAS domain, ... Authors: Lolli, G, Pasqualetto, E, Costanzi, E, Bonetto, G, Battistutta, R. Deposit date: 2015-11-19 Release date: 2015-12-16 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.833 Å) Cite: The STAS domain of mammalian SLC26A5 prestin harbours an anion-binding site. Biochem.J., 473, 2016
7O5T	Crystal Structure of a Class D Carbapenemase Complexed with Bromide Descriptor: BROMIDE ION, Beta-lactamase Authors: Zhou, Q, He, Y, Jin, Y. Deposit date: 2021-04-09 Release date: 2022-04-20 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (1.81 Å) Cite: An Ion-Pair Induced Intermediate Complex Captured in Class D Carbapenemase Reveals Chloride Ion as a Janus Effector Modulating Activity Acs Cent.Sci., 2023
5EUW	Rat prestin STAS domain in complex with nitrate Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, NITRATE ION, ... Authors: Lolli, G, Pasqualetto, E, Costanzi, E, Bonetto, G, Battistutta, R. Deposit date: 2015-11-19 Release date: 2015-12-16 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.81 Å) Cite: The STAS domain of mammalian SLC26A5 prestin harbours an anion-binding site. Biochem.J., 473, 2016
7QS8	Structural insight into the Scribble PDZ domains interaction with the oncogenic Human T-cell lymphotrophic virus-1 (HTLV-1) Tax1 Descriptor: Protein Tax-1, Protein scribble homolog Authors: Javorsky, A, Soares da Costa, T.P, Mackie, E.R, Humbert, P.O, Kvansakul, M. Deposit date: 2022-01-13 Release date: 2022-09-07 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Structural insight into the Scribble PDZ domains interaction with the oncogenic Human T-cell lymphotrophic virus-1 (HTLV-1) Tax1 PBM. Febs J., 290, 2023
6NK0	EphA2 LBD in complex with bA-WLA-Yam peptide Descriptor: 1,2-ETHANEDIOL, 6-AMINOHEXANOIC ACID, DI(HYDROXYETHYL)ETHER, ... Authors: Lechtenberg, B.C, Pasquale, E.B. Deposit date: 2019-01-04 Release date: 2019-05-01 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.53 Å) Cite: Engineering nanomolar peptide ligands that differentially modulate EphA2 receptor signaling. J.Biol.Chem., 294, 2019
5EV4	Structure IV of Intact U2AF65 Recognizing the 3' Splice Site Signal Descriptor: DNA/RNA (5'-R(P*UP*UP*UP*(UD)P*UP*U)-D(P*(BRU)P*(UD))-R(P*C)-3'), GLYCEROL, Splicing factor U2AF 65 kDa subunit Authors: Agrawal, A.A, Jenkins, J.L, Kielkopf, C.L. Deposit date: 2015-11-19 Release date: 2016-02-24 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (1.57 Å) Cite: An extended U2AF(65)-RNA-binding domain recognizes the 3' splice site signal. Nat Commun, 7, 2016
5JDS	Crystal structure of PD-L1 complexed with a nanobody at 1.7 Angstron resolution Descriptor: CHLORIDE ION, Nanobody, Programmed cell death 1 ligand 1, ... Authors: Zhou, A, Wei, H. Deposit date: 2016-04-17 Release date: 2017-04-12 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Structural basis of a novel PD-L1 nanobody for immune checkpoint blockade. Cell Discov, 3, 2017
5EUX	Rat prestin STAS domain in complex with thiocyanate Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Prestin,Prestin, ... Authors: Lolli, G, Pasqualetto, E, Costanzi, E, Bonetto, G, Battistutta, R. Deposit date: 2015-11-19 Release date: 2015-12-16 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (2.038 Å) Cite: The STAS domain of mammalian SLC26A5 prestin harbours an anion-binding site. Biochem.J., 473, 2016
5EVG	Crystal structure of a Francisella virulence factor FvfA in the orthorhombic form Descriptor: Francisella virulence factor Authors: Kolappan, S, Lo, K.Y, Shen, C.L.J, Guttman, J.A, Craig, L. Deposit date: 2015-11-19 Release date: 2016-10-26 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.82 Å) Cite: Structure of the conserved Francisella virulence protein FvfA. Acta Crystallogr D Struct Biol, 73, 2017
8C9T	Catechol O-methyltransferase from Streptomyces avermitilis Descriptor: GLYCEROL, Putative O-methyltransferase Authors: Zhang, L, Groves, M.R. Deposit date: 2023-01-23 Release date: 2023-04-05 Last modified: 2024-06-19 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Structural Characterization and Extended Substrate Scope Analysis of Two Mg 2+ -Dependent O-Methyltransferases from Bacteria. Chembiochem, 24, 2023
5JEF	Fragment of nitrate/nitrite sensor histidine kinase NarQ (WT) in asymmetric holo state Descriptor: EICOSANE, NITRATE ION, Nitrate/nitrite sensor protein NarQ Authors: Gushchin, I, Melnikov, I, Polovinkin, V, Ishchenko, A, Popov, A, Gordeliy, V. Deposit date: 2016-04-18 Release date: 2017-05-31 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (2.42 Å) Cite: Mechanism of transmembrane signaling by sensor histidine kinases. Science, 356, 2017
5EW5	Crystal Structure of Colicin E9 In Complex with Its Immunity Protein Im9 Descriptor: Colicin-E9, Colicin-E9 immunity protein Authors: Klein, A, Wojdyla, J.A, Kleanthous, C. Deposit date: 2015-11-20 Release date: 2016-07-20 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (3.2 Å) Cite: Structural and biophysical analysis of nuclease protein antibiotics. Biochem.J., 473, 2016
7QRS	Structural insight into the Scribble PDZ domains interaction with the oncogenic Human T-cell lymphotrophic virus-1 (HTLV-1) Tax1 Descriptor: ACETATE ION, GLYCEROL, Protein Tax-1, ... Authors: Javorsky, A, Soares da Costa, T.P, Mackie, E.R, Humbert, P.O, Kvansakul, M. Deposit date: 2022-01-12 Release date: 2022-09-07 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.77 Å) Cite: Structural insight into the Scribble PDZ domains interaction with the oncogenic Human T-cell lymphotrophic virus-1 (HTLV-1) Tax1 PBM. Febs J., 290, 2023
8C9V	O-methyltransferase from Desulfuromonas acetoxidans Descriptor: MAGNESIUM ION, O-methyltransferase, family 3 Authors: Zhang, L, Groves, M.R. Deposit date: 2023-01-23 Release date: 2023-04-05 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Structural Characterization and Extended Substrate Scope Analysis of Two Mg 2+ -Dependent O-Methyltransferases from Bacteria. Chembiochem, 24, 2023

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