Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5WK1
DownloadVisualize
BU of 5wk1 by Molmil
Structure of the major capsid protein and the capsid stabilizing protein of the marine siphovirus TW1
Descriptor: Capsid Stabilizing Protein, Major Capsid Protein
Authors:Wang, Z, Rossmann, M.G.
Deposit date:2017-07-24
Release date:2018-01-17
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure of the Marine Siphovirus TW1: Evolution of Capsid-Stabilizing Proteins and Tail Spikes.
Structure, 26, 2018
7OGT
DownloadVisualize
BU of 7ogt by Molmil
Folded elbow of cohesin
Descriptor: Structural maintenance of chromosomes protein 1, Structural maintenance of chromosomes protein 3
Authors:Lee, B.-G, Gonzalez Llamazares, A, Collier, J, Patele, N.J, Nasmyth, K.A, Lowe, J.
Deposit date:2021-05-07
Release date:2021-07-28
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (5.5 Å)
Cite:Folding of cohesin's coiled coil is important for Scc2/4-induced association with chromosomes.
Elife, 10, 2021
1QBK
DownloadVisualize
BU of 1qbk by Molmil
STRUCTURE OF THE KARYOPHERIN BETA2-RAN GPPNHP NUCLEAR TRANSPORT COMPLEX
Descriptor: KARYOPHERIN BETA2, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
Authors:Chook, Y.M, Blobel, G.
Deposit date:1999-04-23
Release date:1999-06-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of the nuclear transport complex karyopherin-beta2-Ran x GppNHp.
Nature, 399, 1999
1QUW
DownloadVisualize
BU of 1quw by Molmil
SOLUTION STRUCTURE OF THE THIOREDOXIN FROM BACILLUS ACIDOCALDARIUS
Descriptor: THIOREDOXIN
Authors:Nicastro, G, de Chiara, C, Pedone, E, Tato, M, Rossi, M.
Deposit date:1999-07-02
Release date:2000-01-26
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:NMR solution structure of a novel thioredoxin from Bacillus acidocaldarius possible determinants of protein stability.
Eur.J.Biochem., 267, 2000
8ELM
DownloadVisualize
BU of 8elm by Molmil
Apo human biliverdin reductase beta (293K)
Descriptor: Flavin reductase (NADPH), SODIUM ION
Authors:McLeod, M.J, Eisenmesser, E.Z, Lee, E, Thorne, R.E.
Deposit date:2022-09-26
Release date:2023-09-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Identifying structural and dynamic changes during the Biliverdin Reductase B catalytic cycle.
Front Mol Biosci, 10, 2023
7OQB
DownloadVisualize
BU of 7oqb by Molmil
The U2 part of Saccharomyces cerevisiae spliceosomal pre-A complex (delta BS-A ACT1)
Descriptor: ACT1 pre-mRNA (delta-BS-A), Cold sensitive U2 snRNA suppressor 1, Pre-mRNA-processing ATP-dependent RNA helicase PRP5, ...
Authors:Zhang, Z, Rigo, N, Dybkov, O, Fourmann, J, Will, C.L, Kumar, V, Urlaub, H, Stark, H, Luehrmann, R.
Deposit date:2021-06-03
Release date:2021-08-11
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Structural insights into how Prp5 proofreads the pre-mRNA branch site.
Nature, 596, 2021
7OQE
DownloadVisualize
BU of 7oqe by Molmil
Saccharomyces cerevisiae spliceosomal pre-A complex (delta BS-A ACT1)
Descriptor: 56 kDa U1 small nuclear ribonucleoprotein component, ACT1 pre-mRNA (delta BS-A), Cold sensitive U2 snRNA suppressor 1, ...
Authors:Zhang, Z, Rigo, N, Dybkov, O, Fourmann, J, Will, C.L, Kumar, V, Urlaub, H, Stark, H, Luehrmann, R.
Deposit date:2021-06-03
Release date:2021-08-11
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (5.9 Å)
Cite:Structural insights into how Prp5 proofreads the pre-mRNA branch site.
Nature, 596, 2021
7OQC
DownloadVisualize
BU of 7oqc by Molmil
The U1 part of Saccharomyces cerevisiae spliceosomal pre-A complex (delta BS-A ACT1)
Descriptor: 56 kDa U1 small nuclear ribonucleoprotein component, ACT1 pre-mRNA (delta BS-A),ACT1 pre-mRNA (delta BS-A),ACT1 pre-mRNA (delta BS-A),ACT1 pre-mRNA (delta BS-A),ACT1 pre-mRNA (delta BS-A),ACT1 pre-mRNA (delta BS-A),ACT1 pre-mRNA (delta BS-A),ACT1 pre-mRNA (delta BS-A),ACT1 pre-mRNA (delta BS-A), Pre-mRNA-processing factor 39, ...
Authors:Zhang, Z, Rigo, N, Dybkov, O, Fourmann, J, Will, C.L, Kumar, V, Urlaub, H, Stark, H, Luehrmann, R.
Deposit date:2021-06-03
Release date:2021-08-11
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structural insights into how Prp5 proofreads the pre-mRNA branch site.
Nature, 596, 2021
7P06
DownloadVisualize
BU of 7p06 by Molmil
Cryo-EM structure of Pdr5 from Saccharomyces cerevisiae in outward-facing conformation with ADP-orthovanadate/ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ADP ORTHOVANADATE, MAGNESIUM ION, ...
Authors:Szewczak-Harris, A, Wagner, M, Du, D, Schmitt, L, Luisi, B.F.
Deposit date:2021-06-29
Release date:2021-11-10
Method:ELECTRON MICROSCOPY (3.77 Å)
Cite:Structure and efflux mechanism of the yeast pleiotropic drug resistance transporter Pdr5.
Nat Commun, 12, 2021
7P05
DownloadVisualize
BU of 7p05 by Molmil
Cryo-EM structure of Pdr5 from Saccharomyces cerevisiae in inward-facing conformation with ADP/ATP and rhodamine 6G
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Pleiotropic ABC efflux transporter of multiple drugs, ...
Authors:Szewczak-Harris, A, Wagner, M, Du, D, Schmitt, L, Luisi, B.F.
Deposit date:2021-06-29
Release date:2021-11-10
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:Structure and efflux mechanism of the yeast pleiotropic drug resistance transporter Pdr5.
Nat Commun, 12, 2021
7P03
DownloadVisualize
BU of 7p03 by Molmil
Cryo-EM structure of Pdr5 from Saccharomyces cerevisiae in inward-facing conformation without nucleotides
Descriptor: Pleiotropic ABC efflux transporter of multiple drugs
Authors:Szewczak-Harris, A, Wagner, M, Du, D, Schmitt, L, Luisi, B.F.
Deposit date:2021-06-29
Release date:2021-11-10
Method:ELECTRON MICROSCOPY (3.45 Å)
Cite:Structure and efflux mechanism of the yeast pleiotropic drug resistance transporter Pdr5.
Nat Commun, 12, 2021
5DIS
DownloadVisualize
BU of 5dis by Molmil
Crystal structure of a CRM1-RanGTP-SPN1 export complex bound to a 113 amino acid FG-repeat containing fragment of Nup214
Descriptor: Exportin-1, GTP-binding nuclear protein Ran, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Monecke, T, Port, S.A, Dickmanns, A, Kehlenbach, R.H, Ficner, R.
Deposit date:2015-09-01
Release date:2015-11-04
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structural and Functional Characterization of CRM1-Nup214 Interactions Reveals Multiple FG-Binding Sites Involved in Nuclear Export.
Cell Rep, 13, 2015
7P04
DownloadVisualize
BU of 7p04 by Molmil
Cryo-EM structure of Pdr5 from Saccharomyces cerevisiae in inward-facing conformation with ADP/ATP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Pleiotropic ABC efflux transporter of multiple drugs
Authors:Szewczak-Harris, A, Wagner, M, Du, D, Schmitt, L, Luisi, B.F.
Deposit date:2021-06-29
Release date:2021-11-10
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Structure and efflux mechanism of the yeast pleiotropic drug resistance transporter Pdr5.
Nat Commun, 12, 2021
5ZC9
DownloadVisualize
BU of 5zc9 by Molmil
Crystal structure of the human eIF4A1-ATP analog-RocA-polypurine RNA complex
Descriptor: (1R,2R,3S,3aR,8bS)-6,8-dimethoxy-3a-(4-methoxyphenyl)-N,N-dimethyl-1,8b-bis(oxidanyl)-3-phenyl-2,3-dihydro-1H-cyclopenta[b][1]benzofuran-2-carboxamide, Eukaryotic initiation factor 4A-I, MAGNESIUM ION, ...
Authors:Iwasaki, W, Takahashi, M, Sakamoto, A, Iwasaki, S, Ito, T.
Deposit date:2018-02-16
Release date:2019-01-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Translation Inhibitor Rocaglamide Targets a Bimolecular Cavity between eIF4A and Polypurine RNA.
Mol. Cell, 73, 2019
5D98
DownloadVisualize
BU of 5d98 by Molmil
Influenza C Virus RNA-dependent RNA Polymerase - Space group P43212
Descriptor: MAGNESIUM ION, Polymerase acidic protein, Polymerase basic protein 2, ...
Authors:Hengrung, N, El Omari, K, Serna Martin, I, Vreede, F.T, Cusack, S, Rambo, R.P, Vonrhein, C, Bricogne, G, Stuart, D.I, Grimes, J.M, Fodor, E.
Deposit date:2015-08-18
Release date:2015-10-21
Last modified:2017-09-13
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Crystal structure of the RNA-dependent RNA polymerase from influenza C virus.
Nature, 527, 2015
5DFF
DownloadVisualize
BU of 5dff by Molmil
Human APE1 product complex
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Freudenthal, B.D, Wilson, S.H.
Deposit date:2015-08-26
Release date:2015-10-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Capturing snapshots of APE1 processing DNA damage.
Nat.Struct.Mol.Biol., 22, 2015
5DFJ
DownloadVisualize
BU of 5dfj by Molmil
Human APE1 E96Q/D210N mismatch substrate complex
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*TP*(3DR)P*CP*GP*AP*CP*GP*GP*AP*TP*CP*C)-3'), ...
Authors:Freudenthal, B.D, Wilson, S.H.
Deposit date:2015-08-26
Release date:2015-10-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Capturing snapshots of APE1 processing DNA damage.
Nat.Struct.Mol.Biol., 22, 2015
5DOE
DownloadVisualize
BU of 5doe by Molmil
Crystal structure of the Human Cytomegalovirus UL53 (residues 72-292)
Descriptor: Virion egress protein UL31 homolog, ZINC ION
Authors:Lye, M.F, El Omari, K, Filman, D.J, Hogle, J.M.
Deposit date:2015-09-11
Release date:2015-11-25
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Unexpected features and mechanism of heterodimer formation of a herpesvirus nuclear egress complex.
Embo J., 34, 2015
5DOC
DownloadVisualize
BU of 5doc by Molmil
Crystal structure of the Human Cytomegalovirus UL53 subunit of the NEC
Descriptor: GLYCEROL, Virion egress protein UL31 homolog, ZINC ION
Authors:Lye, M.F, El Omari, K, Filman, D.J, Hogle, J.M.
Deposit date:2015-09-11
Release date:2015-11-25
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Unexpected features and mechanism of heterodimer formation of a herpesvirus nuclear egress complex.
Embo J., 34, 2015
7PKS
DownloadVisualize
BU of 7pks by Molmil
Structural basis of Integrator-mediated transcription regulation
Descriptor: DNA Template, DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, ...
Authors:Fianu, I, Chen, Y, Dienemann, C, Cramer, P.
Deposit date:2021-08-26
Release date:2021-12-08
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural basis of Integrator-mediated transcription regulation.
Science, 374, 2021
8ELL
DownloadVisualize
BU of 8ell by Molmil
Apo human biliverdin reductase beta (cryogenic)
Descriptor: Flavin reductase (NADPH), SODIUM ION
Authors:McLeod, M.J, Eisenmesser, E.Z, Lee, E, Thorne, R.E.
Deposit date:2022-09-26
Release date:2023-09-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Identifying structural and dynamic changes during the Biliverdin Reductase B catalytic cycle.
Front Mol Biosci, 10, 2023
5DG0
DownloadVisualize
BU of 5dg0 by Molmil
Human APE1 phosphorothioate substrate complex with Mn2+
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(OMC)P*(48Z)P*CP*GP*AP*CP*GP*GP*AP*TP*CP*C)-3'), ...
Authors:Freudenthal, B.D, Wilson, S.H.
Deposit date:2015-08-27
Release date:2015-10-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Capturing snapshots of APE1 processing DNA damage.
Nat.Struct.Mol.Biol., 22, 2015
5DFI
DownloadVisualize
BU of 5dfi by Molmil
Human APE1 phosphorothioate substrate complex
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(OMC)P*(48Z)P*CP*GP*AP*CP*GP*GP*AP*TP*CP*C)-3'), ...
Authors:Freudenthal, B.D, Wilson, S.H.
Deposit date:2015-08-26
Release date:2015-10-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Capturing snapshots of APE1 processing DNA damage.
Nat.Struct.Mol.Biol., 22, 2015
5DOB
DownloadVisualize
BU of 5dob by Molmil
Crystal structure of the Human Cytomegalovirus Nuclear Egress Complex (NEC)
Descriptor: CALCIUM ION, Virion egress protein UL31 homolog, Virion egress protein UL34 homolog, ...
Authors:Lye, M.F, El Omari, K, Filman, D.J, Hogle, J.M.
Deposit date:2015-09-11
Release date:2015-11-25
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Unexpected features and mechanism of heterodimer formation of a herpesvirus nuclear egress complex.
Embo J., 34, 2015
1U6G
DownloadVisualize
BU of 1u6g by Molmil
Crystal Structure of The Cand1-Cul1-Roc1 Complex
Descriptor: Cullin homolog 1, RING-box protein 1, TIP120 protein, ...
Authors:Goldenberg, S.J, Shumway, S.D, Cascio, T.C, Garbutt, K.C, Liu, J, Xiong, Y, Zheng, N.
Deposit date:2004-07-29
Release date:2004-12-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure of the Cand1-Cul1-Roc1 complex reveals regulatory mechanisms for the assembly of the multisubunit cullin-dependent ubiquitin ligases
Cell(Cambridge,Mass.), 119, 2004

223532

數據於2024-08-07公開中

PDB statisticsPDBj update infoContact PDBjnumon