Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7MQ1
DownloadVisualize
BU of 7mq1 by Molmil
C9A Streptococcus pneumoniae CstR in the reduced state, space group C2
Descriptor: CHLORIDE ION, Copper-sensing transcriptional repressor csoR, GLYCEROL, ...
Authors:Fakhoury, J.N, Gonzalez-Gutierrez, G, Giedroc, D.P.
Deposit date:2021-05-05
Release date:2022-03-09
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Functional asymmetry and chemical reactivity of CsoR family persulfide sensors.
Nucleic Acids Res., 49, 2021
5GGP
DownloadVisualize
BU of 5ggp by Molmil
Crystal structure of N-terminal domain of human protein O-mannose beta-1,2-N-acetylglucosaminyltransferase in complex with GlcNAc-beta1,2-Man-peptide
Descriptor: 10-mer Peptide from Dystroglycan, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose, Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1, ...
Authors:Kuwabara, N, Senda, T, Kato, R.
Deposit date:2016-06-16
Release date:2016-08-10
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.599 Å)
Cite:Carbohydrate-binding domain of the POMGnT1 stem region modulates O-mannosylation sites of alpha-dystroglycan
Proc.Natl.Acad.Sci.USA, 113, 2016
8U1A
DownloadVisualize
BU of 8u1a by Molmil
De novo Design of Near Infrared Fluorescent Proteins
Descriptor: Designed Near Infrared Fluorescent Protein MC7BP34
Authors:Liu, Y, Xu, C, Bera, A.K, Kang, A, Baker, D.
Deposit date:2023-08-31
Release date:2024-09-11
Method:X-RAY DIFFRACTION (3.28 Å)
Cite:De novo Design of Near Infrared Fluorescent Proteins
To Be Published
7UK6
DownloadVisualize
BU of 7uk6 by Molmil
Apo form of YjfC from Escherichia coli K-12
Descriptor: Putative acid--amine ligase YjfC, SULFATE ION
Authors:Pederick, J.L, Bruning, J.B.
Deposit date:2022-03-31
Release date:2023-02-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Escherichia coli YgiC and YjfC Possess Peptide─Spermidine Ligase Activity.
Biochemistry, 62, 2023
8QDI
DownloadVisualize
BU of 8qdi by Molmil
compound 1b bound KMT9 crystal structure
Descriptor: (2~{S})-4-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl-[2-[(2~{R})-pyrrolidin-2-yl]ethyl]amino]-2-azanyl-butanoic acid, Methyltransferase N6AMT1, Multifunctional methyltransferase subunit TRM112-like protein
Authors:Sheng, W, Eric, M, Roland, S.
Deposit date:2023-08-29
Release date:2024-09-11
Method:X-RAY DIFFRACTION (1.467 Å)
Cite:compound 1a bound KMT9 crystal structure
To Be Published
8JRC
DownloadVisualize
BU of 8jrc by Molmil
Crystal structure of the GAF domain of the transcriptional activator NifA
Descriptor: Nif-specific regulatory protein
Authors:Zeng, Y, Guo, L, Li, D.F.
Deposit date:2023-06-16
Release date:2024-06-19
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the GAF domain of the transcriptional activator NifA
To Be Published
7UK8
DownloadVisualize
BU of 7uk8 by Molmil
Apo form of YgiC from Escherichia coli K-12
Descriptor: MAGNESIUM ION, NICKEL (II) ION, Putative acid--amine ligase YgiC, ...
Authors:Pederick, J.L, Bruning, J.B.
Deposit date:2022-03-31
Release date:2023-02-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Escherichia coli YgiC and YjfC Possess Peptide─Spermidine Ligase Activity.
Biochemistry, 62, 2023
7OL7
DownloadVisualize
BU of 7ol7 by Molmil
Crystal structure of Lysozyme in complex with trifluoroethanol: tetragonal form
Descriptor: CHLORIDE ION, Lysozyme, SODIUM ION, ...
Authors:Camara-Artigas, A, Salinas-Garcia, M.C, Plaza-Garrido, M.
Deposit date:2021-05-19
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Crystal structure of Lysozyme in complex with TFE
To be published
8TX9
DownloadVisualize
BU of 8tx9 by Molmil
Nan Regulatory Protein (core isomerase domain) from Streptococcus pneumoniae
Descriptor: 2-acetamido-2-deoxy-6-O-phosphono-alpha-D-mannopyranose, MurR/RpiR family transcriptional regulator, SODIUM ION
Authors:Wood, D.M, Horne, C.R, Panjikar, S, Dobson, R.C.J.
Deposit date:2023-08-23
Release date:2024-09-11
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structure of isomerase domain of the nan-regulatory protein (NanR) from Streptococcus pneumoniae
To Be Published
5BYT
DownloadVisualize
BU of 5byt by Molmil
PRPP complexed with a single Mg in the active site of Mycobacterium tuberculosis anthranilate phosphoribosyltransferase (AnPRT; trpD)
Descriptor: 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose, Anthranilate phosphoribosyltransferase, MAGNESIUM ION
Authors:Evans, G.L, Baker, E.N, Lott, J.S, TB Structural Genomics Consortium (TBSGC)
Deposit date:2015-06-11
Release date:2016-07-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Binding and mimicking of the phosphate-rich substrate, PRPP.
To be Published
5TZQ
DownloadVisualize
BU of 5tzq by Molmil
Crystal Structure of FPV039:Bmf BH3 complex
Descriptor: 1,2-ETHANEDIOL, Bcl-2-like protein FPV039, Bcl-2-modifying factor
Authors:Anasir, M.I, Kvansakul, M.
Deposit date:2016-11-22
Release date:2017-05-03
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural basis of apoptosis inhibition by the fowlpox virus protein FPV039.
J. Biol. Chem., 292, 2017
8JT4
DownloadVisualize
BU of 8jt4 by Molmil
Substrate -binding mode guided protein design of alginate lyase FlAlyA for altered end-product distribution
Descriptor: Alginate lyase
Authors:Zhang, X, Yang, D.F.
Deposit date:2023-06-21
Release date:2024-06-26
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Substrate -binding mode guided protein design of alginate lyase FlAlyA for altered end-product distribution
To Be Published
7OL8
DownloadVisualize
BU of 7ol8 by Molmil
Crystal structure of Lysozyme in complex with trifluoroethanol: orthorhombic form
Descriptor: CHLORIDE ION, Lysozyme, SULFATE ION, ...
Authors:Camara-Artigas, A, Salinas-Garcia, M.C, Plaza-Garrido, M.
Deposit date:2021-05-19
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Crystal structure of Lysozyme in complex with TFE
To be published
6LTD
DownloadVisualize
BU of 6ltd by Molmil
Crystal Structure of Nonribosomal peptide synthetases (NRPS), FmoA3 (S1046A)-alpha-methyl-L-serine-AMP bound form
Descriptor: ADENOSINE MONOPHOSPHATE, Nonribosomal peptide synthetase, alpha-methyl-L-serine
Authors:Senda, T, Harada, A.
Deposit date:2020-01-22
Release date:2021-03-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (4.1 Å)
Cite:Structural and Functional Analyses of the Tridomain-Nonribosomal Peptide Synthetase FmoA3 for 4-Methyloxazoline Ring Formation.
Angew.Chem.Int.Ed.Engl., 60, 2021
7UVA
DownloadVisualize
BU of 7uva by Molmil
Crystal structure of KDM2A histone demethylase catalytic domain in complex with an H3C36 peptide modified by UNC8015
Descriptor: FE (III) ION, Histone H3.2, Lysine-specific demethylase 2A, ...
Authors:Budziszewski, G.R, Azzam, D.N, Spangler, C.J, Skrajna, A, Foley, C.A, James, L.I, Frye, S.V, McGinty, R.K.
Deposit date:2022-04-29
Release date:2023-02-22
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structural basis of paralog-specific KDM2A/B nucleosome recognition.
Nat.Chem.Biol., 19, 2023
7Y4H
DownloadVisualize
BU of 7y4h by Molmil
AcvX from Actinomadura viridis that exhibits deglycosylation activity on lobophorins
Descriptor: AcvX
Authors:Tan, B, Zhang, L.P, Zhang, C.S.
Deposit date:2022-06-14
Release date:2023-05-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A Widespread Glycosidase Confers Lobophorin Resistance and Host-Dependent Structural Diversity.
Angew.Chem.Int.Ed.Engl., 62, 2023
5U6F
DownloadVisualize
BU of 5u6f by Molmil
Bacterial adhesin from Mobiluncus mulieris containing intramolecular disulfide, isopeptide, and ester bond cross-links (space group P21)
Descriptor: LPXTG-motif cell wall anchor domain protein
Authors:Paynter, J, Young, P.G, Squire, C.J.
Deposit date:2016-12-07
Release date:2018-06-13
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Domain structure and cross-linking in a giant adhesin from the Mobiluncus mulieris bacterium.
Acta Crystallogr D Struct Biol, 79, 2023
7OL6
DownloadVisualize
BU of 7ol6 by Molmil
Crystal structure of Lysozyme in complex with Imidazole
Descriptor: CHLORIDE ION, IMIDAZOLE, Lysozyme, ...
Authors:Camara-Artigas, A, Salinas-Garcia, M.C, Plaza-Garrido, M.
Deposit date:2021-05-19
Release date:2022-06-01
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Crystal structure of Lysozyme in complex with Imidazole
To be published
7UI4
DownloadVisualize
BU of 7ui4 by Molmil
Crystal structure of the DNA preQ0 insertase DpdA
Descriptor: DNA-guanine transglycosylase, ZINC ION
Authors:Hung, S.-H, Swairjo, M.A.
Deposit date:2022-03-28
Release date:2023-02-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:7-Deazaguanines in DNA: functional and structural elucidation of a DNA modification system.
Nucleic Acids Res., 51, 2023
8QDG
DownloadVisualize
BU of 8qdg by Molmil
compound 1a bound KMT9 crystal structure
Descriptor: (2~{S})-4-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl-[(3~{S})-pyrrolidin-3-yl]amino]-2-azanyl-butanoic acid, Methyltransferase N6AMT1, Multifunctional methyltransferase subunit TRM112-like protein
Authors:Sheng, W, Eric, M, Roland, S.
Deposit date:2023-08-29
Release date:2024-09-11
Method:X-RAY DIFFRACTION (1.392 Å)
Cite:compound 1a bound KMT9 crystal structure
To Be Published
8U2L
DownloadVisualize
BU of 8u2l by Molmil
Crystal structure of KAI2 S95C L48I mutant
Descriptor: GLYCEROL, KARRIKIN INSENSITIVE 2, SULFATE ION
Authors:Davies, S.F, Waters, M.T, Bond, C.S.
Deposit date:2023-09-06
Release date:2024-09-18
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Crystal structure of KAI2 S95C L48I mutant
To Be Published
5GHF
DownloadVisualize
BU of 5ghf by Molmil
Transaminase with L-ala
Descriptor: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, Aminotransferase class-III
Authors:Kim, J, Park, J.
Deposit date:2016-06-19
Release date:2017-05-24
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Active Site Engineering of omega-Transaminase Guided by Docking Orientation Analysis and Virtual Activity Screening
Acs Catalysis, 7, 2017
8U33
DownloadVisualize
BU of 8u33 by Molmil
Crystal structure of KAI2 S95C mutant
Descriptor: DIMETHYL SULFOXIDE, GLYCEROL, Probable esterase KAI2, ...
Authors:Davies, S.F, Waters, M.T, Bond, C.S.
Deposit date:2023-09-07
Release date:2024-09-18
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Crystal structure of KAI2 S95C mutant
To Be Published
7OMO
DownloadVisualize
BU of 7omo by Molmil
Crystal structure of coelenteramine-bound Renilla reniformis luciferase RLuc8-D120A variant
Descriptor: 4-[5-azanyl-6-(phenylmethyl)pyrazin-2-yl]phenol, CHLORIDE ION, GLYCEROL, ...
Authors:Schenkmayerova, A, Marek, M.
Deposit date:2021-05-24
Release date:2022-06-01
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.451 Å)
Cite:Catalytic mechanism for Renilla-type luciferases
Nat Catal, 2023
7YD9
DownloadVisualize
BU of 7yd9 by Molmil
Crystal structure of the P450 BM3 heme domain mutant F87G/T268V/A184V/A328V in complex with N-imidazolyl-hexanoyl-L-phenylalanine,methylbenzene and hydroxylamine
Descriptor: (2S)-2-(6-imidazol-1-ylhexanoylamino)-3-phenyl-propanoic acid, Bifunctional cytochrome P450/NADPH--P450 reductase, HYDROXYAMINE, ...
Authors:Dong, S, Chen, J, Jiang, Y, Cong, Z, Feng, Y.
Deposit date:2022-07-04
Release date:2023-05-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.748 Å)
Cite:Regiodivergent and Enantioselective Hydroxylation of C-H bonds by Synergistic Use of Protein Engineering and Exogenous Dual-Functional Small Molecules.
Angew.Chem.Int.Ed.Engl., 62, 2023

226707

數據於2024-10-30公開中

PDB statisticsPDBj update infoContact PDBjnumon