PDB: 46984 resultsInfo pagesStatus searchChemie searchBIRD

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8RD8	Cryo-EM structure of P. urativorans 70S ribosome in complex with hibernation factors Balon and RaiA (structure 1). Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S30, ... Authors: Helena-Bueno, K, Rybak, M.Y, Gagnon, M.G, Hill, C.H, Melnikov, S.V. Deposit date: 2023-12-07 Release date: 2024-02-21 Last modified: 2024-03-13 Method: ELECTRON MICROSCOPY (2.62 Å) Cite: A new family of bacterial ribosome hibernation factors. Nature, 626, 2024
7TK1	Yeast ATP synthase State 1catalytic(d) without exogenous ATP backbone model Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ... Authors: Guo, H, Rubinstein, J.L. Deposit date: 2022-01-17 Release date: 2022-04-20 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (7.1 Å) Cite: Structure of ATP synthase under strain during catalysis. Nat Commun, 13, 2022
7TK7	Yeast ATP synthase State 1catalytic(b) with 10 mM ATP backbone model Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ... Authors: Guo, H, Rubinstein, J.L. Deposit date: 2022-01-17 Release date: 2022-04-20 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (6.7 Å) Cite: Structure of ATP synthase under strain during catalysis. Nat Commun, 13, 2022
7TKD	Yeast ATP synthase State 1catalytic(h) with 10 mM ATP backbone model Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ... Authors: Guo, H, Rubinstein, J.L. Deposit date: 2022-01-17 Release date: 2022-04-20 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (7.7 Å) Cite: Structure of ATP synthase under strain during catalysis. Nat Commun, 13, 2022
7TK9	Yeast ATP synthase State 1catalytic(d) with 10 mM ATP backbone model Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ... Authors: Guo, H, Rubinstein, J.L. Deposit date: 2022-01-17 Release date: 2022-04-20 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (6 Å) Cite: Structure of ATP synthase under strain during catalysis. Nat Commun, 13, 2022
7TK4	Yeast ATP synthase State 1binding(c) with 10 mM ATP backbone model Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ... Authors: Guo, H, Rubinstein, J.L. Deposit date: 2022-01-17 Release date: 2022-04-20 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (7 Å) Cite: Structure of ATP synthase under strain during catalysis. Nat Commun, 13, 2022
7TKC	Yeast ATP synthase State 1catalytic(g) with 10 mM ATP backbone model Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ... Authors: Guo, H, Rubinstein, J.L. Deposit date: 2022-01-17 Release date: 2022-04-20 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (5.8 Å) Cite: Structure of ATP synthase under strain during catalysis. Nat Commun, 13, 2022
7LV7	Crystal Structure of Branched-chain amino acid aminotransferase from Giardia lamblia ATCC 50803 Descriptor: 1,2-ETHANEDIOL, Branched-chain amino acid aminotransferase, CHLORIDE ION, ... Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID) Deposit date: 2021-02-24 Release date: 2021-03-17 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Crystal Structure of Branched-chain amino acid aminotransferase from Giardia lamblia ATCC 50803 to be published
7TKM	Yeast ATP synthase State 3binding(b) with 10 mM ATP backbone model Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ... Authors: Guo, H, Rubinstein, J.L. Deposit date: 2022-01-17 Release date: 2022-05-11 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (4.5 Å) Cite: Structure of ATP synthase under strain during catalysis. Nat Commun, 13, 2022
7TKP	Yeast ATP synthase State 3catalytic(b) with 10 mM ATP backbone model Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ... Authors: Guo, H, Rubinstein, J.L. Deposit date: 2022-01-17 Release date: 2022-05-11 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (4.6 Å) Cite: Structure of ATP synthase under strain during catalysis. Nat Commun, 13, 2022
7TKH	Yeast ATP synthase State 2catalytic(b) with 10 mM ATP backbone model Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ... Authors: Guo, H, Rubinstein, J.L. Deposit date: 2022-01-17 Release date: 2022-05-11 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (4.4 Å) Cite: Structure of ATP synthase under strain during catalysis. Nat Commun, 13, 2022
7TKI	Yeast ATP synthase State 2catalytic(c) with 10 mM ATP backbone model Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ... Authors: Guo, H, Rubinstein, J.L. Deposit date: 2022-01-17 Release date: 2022-05-11 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (7.1 Å) Cite: Structure of ATP synthase under strain during catalysis. Nat Commun, 13, 2022
7TOO	Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20 Descriptor: 25S rRNA, 5.8S rRNA, 5S rRNA, ... Authors: Loveland, A.B, Svidritskiy, E, Susorov, D, Lee, S, Park, A, Zvornicanin, S, Demo, G, Gao, F.B, Korostelev, A.A. Deposit date: 2022-01-24 Release date: 2022-05-25 Last modified: 2022-06-01 Method: ELECTRON MICROSCOPY (2.7 Å) Cite: Ribosome inhibition by C9ORF72-ALS/FTD-associated poly-PR and poly-GR proteins revealed by cryo-EM. Nat Commun, 13, 2022
7TYG	Structure of the human leucine rich repeat protein SHOC2, residues 80-582 Descriptor: Leucine-rich repeat protein SHOC-2, MAGNESIUM ION Authors: Dhembi, A, Clark, K, King, D.A. Deposit date: 2022-02-13 Release date: 2022-06-22 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Structure of the MRAS-SHOC2-PP1C phosphatase complex. Nature, 609, 2022
7U0H	State NE1 nucleolar 60S ribosome biogenesis intermediate - Overall model Descriptor: 25S rRNA, 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase, 5.8S rRNA, ... Authors: Cruz, V.E, Sekulski, K, Peddada, N, Erzberger, J.P. Deposit date: 2022-02-18 Release date: 2022-12-14 Last modified: 2024-06-12 Method: ELECTRON MICROSCOPY (2.76 Å) Cite: Sequence-specific remodeling of a topologically complex RNP substrate by Spb4. Nat.Struct.Mol.Biol., 29, 2022
7LV0	Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS) Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Demo, G, Loveland, A.B, Svidritskiy, E, Gamper, H.B, Hou, Y.M, Korostelev, A.A. Deposit date: 2021-02-23 Release date: 2021-07-28 Last modified: 2021-08-25 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Structural basis for +1 ribosomal frameshifting during EF-G-catalyzed translocation. Nat Commun, 12, 2021
8RGR	Closed Complex I from murine liver Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, ... Authors: Vercellino, I, Sazanov, L.A. Deposit date: 2023-12-14 Release date: 2024-04-24 Last modified: 2024-07-31 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: SCAF1 drives the compositional diversity of mammalian respirasomes. Nat.Struct.Mol.Biol., 31, 2024
8RGT	Open Complex I from murine brain Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, ... Authors: Vercellino, I, Sazanov, L.A. Deposit date: 2023-12-14 Release date: 2024-04-24 Last modified: 2024-07-31 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: SCAF1 drives the compositional diversity of mammalian respirasomes. Nat.Struct.Mol.Biol., 31, 2024
7TKZ	Crystal structure of D94A human Galectin-7 mutant in presence of lactose Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Galectin-7, ... Authors: Pham, N.T.H, Calmettes, C, Doucet, N. Deposit date: 2022-01-17 Release date: 2023-01-25 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.83 Å) Cite: Crystal structure of D94A human Galectin-7 mutant in presence of lactose To Be Published
7LXT	Structure of Plasmodium falciparum 20S proteasome with bound bortezomib Descriptor: 20S proteasome alpha-1 subunit, 20S proteasome alpha-2 subunit, 20S proteasome alpha-3 subunit, ... Authors: Morton, C.J, Metcalfe, R.D, Liu, B, Xie, S.C, Hanssen, E, Leis, A.P, Tilley, L, Griffin, M.D.W. Deposit date: 2021-03-05 Release date: 2021-09-22 Last modified: 2022-04-13 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Design of proteasome inhibitors with oral efficacy in vivo against Plasmodium falciparum and selectivity over the human proteasome. Proc.Natl.Acad.Sci.USA, 118, 2021
7LXU	Structure of Plasmodium falciparum 20S proteasome with bound MPI-5 Descriptor: 20S proteasome alpha-1 subunit, 20S proteasome alpha-2 subunit, 20S proteasome alpha-3 subunit, ... Authors: Metcalfe, R.D, Morton, C.J, Xie, S.C, Liu, B, Hanssen, E, Leis, A.P, Tilley, L, Griffin, M.D.W. Deposit date: 2021-03-05 Release date: 2021-09-22 Last modified: 2022-04-13 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Design of proteasome inhibitors with oral efficacy in vivo against Plasmodium falciparum and selectivity over the human proteasome. Proc.Natl.Acad.Sci.USA, 118, 2021
7TZ6	Structure of mitochondrial bc1 in complex with ck-2-68 Descriptor: 7-chloranyl-3-methyl-2-[4-[[4-(trifluoromethyloxy)phenyl]methyl]phenyl]-1~{H}-quinolin-4-one, Cytochrome b, Cytochrome b-c1 complex subunit 1, ... Authors: Xia, D, Esser, L, Zhou, F, Huang, R. Deposit date: 2022-02-15 Release date: 2023-02-22 Last modified: 2023-09-06 Method: ELECTRON MICROSCOPY (2.88 Å) Cite: Structure of complex III with bound antimalarial agent CK-2-68 provides insights into selective inhibition of Plasmodium cytochrome bc 1 complexes. J.Biol.Chem., 299, 2023
8QU5	mt-LSU assembly intermediate in GTPBP8 knock-out cells, state 2 Descriptor: 16S ribosomal RNA, 39S ribosomal protein L10, mitochondrial, ... Authors: Valentin Gese, G, Cipullo, M, Rorbach, J, Hallberg, B.M. Deposit date: 2023-10-13 Release date: 2024-06-26 Last modified: 2024-07-17 Method: ELECTRON MICROSCOPY (2.42 Å) Cite: GTPBP8 plays a role in mitoribosome formation in human mitochondria. Nat Commun, 15, 2024
7LXV	Structure of human 20S proteasome with bound MPI-5 Descriptor: N-[(1R)-2-([1,1'-biphenyl]-4-yl)-1-boronoethyl]-1-methyl-L-prolinamide, Proteasome subunit alpha type-1, Proteasome subunit alpha type-2, ... Authors: Metcalfe, R.D, Morton, C.J, Liu, B, Xie, S.C, Hanssen, E, Leis, A.P, Tilley, L, Griffin, M.D.W. Deposit date: 2021-03-05 Release date: 2021-09-22 Last modified: 2022-04-13 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Design of proteasome inhibitors with oral efficacy in vivo against Plasmodium falciparum and selectivity over the human proteasome. Proc.Natl.Acad.Sci.USA, 118, 2021
8RXH	CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN Descriptor: (2S)-2-[2-[4-[[(2R,3S,4S)-3-acetyloxy-4-oxidanyl-pyrrolidin-2-yl]methyl]phenoxy]ethanoylamino]-6-azanyl-hexanoic acid, 40S ribosomal protein S12, 40S ribosomal protein S14, ... Authors: Rajan, K.S, Yonath, A. Deposit date: 2024-02-07 Release date: 2024-05-15 Last modified: 2024-05-22 Method: ELECTRON MICROSCOPY (2.93 Å) Cite: Structural and mechanistic insights into the function of Leishmania ribosome lacking a single pseudouridine modification. Cell Rep, 43, 2024

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