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6YV9	Mannosyltransferase PcManGT from Pyrobaculum calidifontis in complex with GDP-Man and Mn2+ Descriptor: GUANOSINE-5'-DIPHOSPHATE-ALPHA-D-MANNOSE, Glycosyl transferase, family 2, ... Authors: Divne, C, Gandini, R. Deposit date: 2020-04-28 Release date: 2020-07-22 Last modified: 2024-05-15 Method: X-RAY DIFFRACTION (2.7 Å) Cite: A Transmembrane Crenarchaeal Mannosyltransferase Is Involved in N-Glycan Biosynthesis and Displays an Unexpected Minimal Cellulose-Synthase-like Fold. J.Mol.Biol., 432, 2020
6LQM	Cryo-EM structure of a pre-60S ribosomal subunit - state C Descriptor: 28S rRNA, 5.8S rRNA, 5S rRNA, ... Authors: Liang, X, Zuo, M, Zhang, Y, Li, N, Ma, C, Dong, M, Gao, N. Deposit date: 2020-01-14 Release date: 2020-08-26 Method: ELECTRON MICROSCOPY (3.09 Å) Cite: Structural snapshots of human pre-60S ribosomal particles before and after nuclear export. Nat Commun, 11, 2020
2PLK	Crystal structure of lysine/ornithine decarboxylase complexed with cadaverine from Vibrio vulnificus Descriptor: (4-{(E)-[(5-AMINOPENTYL)IMINO]METHYL}-5-HYDROXY-6-METHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE, lysine/ornithine decarboxylase Authors: Lee, J, Goldsmith, E.J, Phillips, M.A. Deposit date: 2007-04-19 Release date: 2007-07-10 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.14 Å) Cite: Phylogenetic diversity and the structural basis of substrate specificity in the beta/alpha-barrel fold basic amino acid decarboxylases. J.Biol.Chem., 282, 2007
6LU8	Cryo-EM structure of a human pre-60S ribosomal subunit - state A Descriptor: 28S rRNA, 5.8S rRNA, 5S rRNA, ... Authors: Liang, X, Zuo, M, Zhang, Y, Li, N, Ma, C, Dong, M, Gao, N. Deposit date: 2020-01-26 Release date: 2020-08-26 Method: ELECTRON MICROSCOPY (3.13 Å) Cite: Structural snapshots of human pre-60S ribosomal particles before and after nuclear export. Nat Commun, 11, 2020
2PLJ	Crystal structure of lysine/ornithine decarboxylase complexed with putrescine from Vibrio vulnificus Descriptor: (4-{[(4-AMINOBUTYL)AMINO]METHYL}-5-HYDROXY-6-METHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE, MAGNESIUM ION, lysine/ornithine decarboxylase Authors: Lee, J, Goldsmith, E.J, Phillips, M.A. Deposit date: 2007-04-19 Release date: 2007-07-10 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Phylogenetic diversity and the structural basis of substrate specificity in the beta/alpha-barrel fold basic amino acid decarboxylases. J.Biol.Chem., 282, 2007
2PSP	Porcine pancreatic spasmolytic polypeptide Descriptor: PORCINE PANCREATIC SPASMOLYTIC POLYPEPTIDE Authors: Petersen, T.N, Henriksen, A, Gajhede, M. Deposit date: 1996-02-01 Release date: 1996-07-11 Last modified: 2019-12-25 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Structure of porcine pancreatic spasmolytic polypeptide at 1.95 A resolution. Acta Crystallogr.,Sect.D, 52, 1996
4IKX	Crystal structure of peptide transporter POT (E310Q mutant) Descriptor: Di-tripeptide ABC transporter (Permease), OLEIC ACID, SULFATE ION Authors: Doki, S, Kato, H.E, Ishitani, R, Nureki, O. Deposit date: 2012-12-28 Release date: 2013-07-10 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Structural basis for dynamic mechanism of proton-coupled symport by the peptide transporter POT. Proc.Natl.Acad.Sci.USA, 110, 2013
4IKW	Crystal structure of peptide transporter POT in complex with sulfate Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Di-tripeptide ABC transporter (Permease), OLEIC ACID, ... Authors: Doki, S, Kato, H.E, Ishitani, R, Nureki, O. Deposit date: 2012-12-28 Release date: 2013-07-10 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (2.004 Å) Cite: Structural basis for dynamic mechanism of proton-coupled symport by the peptide transporter POT. Proc.Natl.Acad.Sci.USA, 110, 2013
4IKY	Crystal structure of peptide transporter POT (E310Q mutant) in complex with sulfate Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Di-tripeptide ABC transporter (Permease), OLEIC ACID, ... Authors: Doki, S, Kato, H.E, Ishitani, R, Nureki, O. Deposit date: 2012-12-28 Release date: 2013-07-10 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structural basis for dynamic mechanism of proton-coupled symport by the peptide transporter POT. Proc.Natl.Acad.Sci.USA, 110, 2013
4JQ7	Crystal structure of EGFR kinase domain in complex with compound 2a Descriptor: (2S)-2-[(5,6-diphenylfuro[2,3-d]pyrimidin-4-yl)amino]-2-phenylethanol, Epidermal growth factor receptor Authors: Peng, Y.H, Wu, J.S. Deposit date: 2013-03-20 Release date: 2013-06-19 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.73 Å) Cite: Protein Kinase Inhibitor Design by Targeting the Asp-Phe-Gly (DFG) Motif: The Role of the DFG Motif in the Design of Epidermal Growth Factor Receptor Inhibitors J.Med.Chem., 56, 2013
4JQ8	Crystal structure of EGFR kinase domain in complex with compound 4b Descriptor: Epidermal growth factor receptor, N-[3-(4-{[(1S)-2-hydroxy-1-phenylethyl]amino}-6-phenylfuro[2,3-d]pyrimidin-5-yl)phenyl]-N~3~,N~3~-dimethyl-beta-alaninamide Authors: Peng, Y.H, Wu, J.S. Deposit date: 2013-03-20 Release date: 2013-06-19 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.83 Å) Cite: Protein Kinase Inhibitor Design by Targeting the Asp-Phe-Gly (DFG) Motif: The Role of the DFG Motif in the Design of Epidermal Growth Factor Receptor Inhibitors J.Med.Chem., 56, 2013
4JR3	Crystal structure of EGFR kinase domain in complex with compound 3g Descriptor: Epidermal growth factor receptor, N-[3-(4-{[(1S)-2-hydroxy-1-phenylethyl]amino}-6-phenylfuro[2,3-d]pyrimidin-5-yl)phenyl]acetamide Authors: Peng, Y.H, Wu, J.S. Deposit date: 2013-03-21 Release date: 2013-06-19 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Protein Kinase Inhibitor Design by Targeting the Asp-Phe-Gly (DFG) Motif: The Role of the DFG Motif in the Design of Epidermal Growth Factor Receptor Inhibitors J.Med.Chem., 56, 2013
4JRV	Crystal structure of EGFR kinase domain in complex with compound 4c Descriptor: 4-(dimethylamino)-N-[3-(4-{[(1S)-2-hydroxy-1-phenylethyl]amino}-6-phenylfuro[2,3-d]pyrimidin-5-yl)phenyl]butanamide, Epidermal growth factor receptor Authors: Peng, Y.H, Wu, J.S. Deposit date: 2013-03-22 Release date: 2013-06-19 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Protein Kinase Inhibitor Design by Targeting the Asp-Phe-Gly (DFG) Motif: The Role of the DFG Motif in the Design of Epidermal Growth Factor Receptor Inhibitors J.Med.Chem., 56, 2013
8DMB	Structure of Desulfovirgula thermocuniculi IsrB (DtIsrB) in complex with omega RNA and target DNA Descriptor: MAGNESIUM ION, Ubiquitin-like protein SMT3,IsrB protein,monomeric superfolder Green Fluorescent Protein, non-target DNA, ... Authors: Seiichi, H, Kappel, K, Zhang, F. Deposit date: 2022-07-08 Release date: 2022-10-19 Last modified: 2024-06-12 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Structure of the OMEGA nickase IsrB in complex with omega RNA and target DNA. Nature, 610, 2022
4IKV	Crystal structure of peptide transporter POT Descriptor: (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Di-tripeptide ABC transporter (Permease), OLEIC ACID, ... Authors: Doki, S, Kato, H.E, Ishitani, R, Nureki, O. Deposit date: 2012-12-28 Release date: 2013-07-10 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Structural basis for dynamic mechanism of proton-coupled symport by the peptide transporter POT. Proc.Natl.Acad.Sci.USA, 110, 2013
3QLT	Crystal structure of a GluK2 (GluR6) glycan wedge homodimer assembly Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Glutamate receptor, ionotropic kainate 2 Authors: Kumar, J, Mayer, M.L. Deposit date: 2011-02-03 Release date: 2011-08-03 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.988 Å) Cite: Structure and assembly mechanism for heteromeric kainate receptors. Neuron, 71, 2011
3QLU	Crystal structure of the GluK2/GluK5 (GluR6/KA2) ATD dimer assembly Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, GLYCEROL, ... Authors: Kumar, J, Mayer, M.L. Deposit date: 2011-02-03 Release date: 2011-08-03 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.906 Å) Cite: Structure and assembly mechanism for heteromeric kainate receptors. Neuron, 71, 2011
4IKZ	Crystal structure of peptide transporter POT (E310Q mutant) in complex with alafosfalin Descriptor: Di-tripeptide ABC transporter (Permease), N-[(1R)-1-phosphonoethyl]-L-alaninamide, SULFATE ION Authors: Doki, S, Kato, H.E, Ishitani, R, Nureki, O. Deposit date: 2012-12-28 Release date: 2013-07-10 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Structural basis for dynamic mechanism of proton-coupled symport by the peptide transporter POT. Proc.Natl.Acad.Sci.USA, 110, 2013
7RK8	Cryo-EM Structure of Adeno-Associated Virus Serotype 9 with Engineered Peptide Domain PHP.B (AAV9-PHP.B) Descriptor: Capsid protein VP1 Authors: Fluck, E.C, Pumroy, R.A, Moiseenkova-Bell, V.Y. Deposit date: 2021-07-22 Release date: 2021-08-04 Last modified: 2024-06-05 Method: ELECTRON MICROSCOPY (2.27 Å) Cite: Context-Specific Function of the Engineered Peptide Domain of PHP.B. J.Virol., 95, 2021
7V86	Cryo-EM structure of SARS-CoV-2 S-Kappa variant (B.1.617.1) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, three ACE2-bound form Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2,Green fluorescent protein, ... Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-22 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (2.8 Å) Cite: Cryo-EM structure of SARS-CoV-2 S-Kappa variant (B.1.617.1) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, three ACE2-bound form To Be Published
7RK9	Cryo-EM Structure of Adeno-Associated Virus Serotype 1 with Engineered Peptide Domain PHP.B (AAV1-PHP.B) Descriptor: Capsid protein Authors: Fluck, E.C, Pumroy, R.A, Moiseenkova-Bell, V.Y. Deposit date: 2021-07-22 Release date: 2021-08-04 Last modified: 2024-06-05 Method: ELECTRON MICROSCOPY (2.32 Å) Cite: Context-Specific Function of the Engineered Peptide Domain of PHP.B. J.Virol., 95, 2021
7V81	Cryo-EM structure of SARS-CoV-2 S-Gamma variant (P.1) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, two ACE2-bound form Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2,Green fluorescent protein, ... Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-22 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Cryo-EM structure of SARS-CoV-2 S-Gamma variant (P.1) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, two ACE2-bound form To Be Published
7V83	Cryo-EM structure of SARS-CoV-2 S-Gamma variant (P.1) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, three ACE2-bound form conformation 2 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2,Green fluorescent protein, ... Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-22 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (2.8 Å) Cite: Cryo-EM structure of SARS-CoV-2 S-Gamma variant (P.1) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, three ACE2-bound form conformation 2 To Be Published
7V84	Local refinement of SARS-CoV-2 S-Gamma variant (P.1) RBD and Angiotensin-converting enzyme 2 (ACE2) ectodomain Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2,Green fluorescent protein, ... Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-22 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (3 Å) Cite: Local refinement of SARS-CoV-2 S-Gamma variant (P.1) RBD and Angiotensin-converting enzyme 2 (ACE2) ectodomain To Be Published
7V85	Cryo-EM structure of SARS-CoV-2 S-Kappa variant (B.1.617.1) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, two ACE2-bound form Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2,Green fluorescent protein, ... Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-22 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Cryo-EM structure of SARS-CoV-2 S-Kappa variant (B.1.617.1) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, two ACE2-bound form To Be Published

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