Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3HBX
DownloadVisualize
BU of 3hbx by Molmil
Crystal structure of GAD1 from Arabidopsis thaliana
Descriptor: Glutamate decarboxylase 1
Authors:Gut, H, Dominici, P, Pilati, S, Gruetter, M.G, Capitani, G.
Deposit date:2009-05-05
Release date:2009-07-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.672 Å)
Cite:A common structural basis for pH- and calmodulin-mediated regulation in plant glutamate decarboxylase.
J.Mol.Biol., 392, 2009
4K4W
DownloadVisualize
BU of 4k4w by Molmil
Poliovirus polymerase elongation complex (r5+2_form)
Descriptor: RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*GP*AP*GP*AP*GP*AP*CP*C)-3'), RNA (5'-R(P*GP*GP*GP*AP*GP*AP*UP*GP*AP*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*UP*CP*GP*UP*CP*GP*AP*AP*A)-3'), RNA-directed RNA polymerase 3D-POL
Authors:Gong, P, Peersen, O.B.
Deposit date:2013-04-12
Release date:2013-05-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Structures of coxsackievirus, rhinovirus, and poliovirus polymerase elongation complexes solved by engineering RNA mediated crystal contacts.
Plos One, 8, 2013
5RSV
DownloadVisualize
BU of 5rsv by Molmil
PanDDA analysis group deposition -- Crystal structure of SARS-CoV-2 NSP3 macrodomain in complex with ZINC000000340465
Descriptor: 4-[(METHYLSULFONYL)AMINO]BENZOIC ACID, Non-structural protein 3
Authors:Correy, G.J, Young, I.D, Thompson, M.C, Fraser, J.S.
Deposit date:2020-09-28
Release date:2020-12-16
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.03 Å)
Cite:Fragment binding to the Nsp3 macrodomain of SARS-CoV-2 identified through crystallographic screening and computational docking.
Sci Adv, 7, 2021
3H9J
DownloadVisualize
BU of 3h9j by Molmil
Crystal structure of E. coli MccB + AMPCPP + SeMeT MccA
Descriptor: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, MccB protein, Microcin C7 ANALOG, ...
Authors:Regni, C.A, Roush, R.F, Miller, D, Nourse, A, Walsh, C.T, Schulman, B.A.
Deposit date:2009-04-30
Release date:2009-06-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:How the MccB bacterial ancestor of ubiquitin E1 initiates biosynthesis of the microcin C7 antibiotic.
Embo J., 28, 2009
4KJT
DownloadVisualize
BU of 4kjt by Molmil
Structure of the L100F MUTANT OF DEHALOPEROXIDASE-HEMOGLOBIN A FROM AMPHITRITE ORNATA WITH OXYGEN
Descriptor: 1,2-ETHANEDIOL, Dehaloperoxidase A, OXYGEN MOLECULE, ...
Authors:Wang, C, Lovelace, L, Lebioda, L.
Deposit date:2013-05-03
Release date:2014-03-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Influence of heme environment structure on dioxygen affinity for the dual function Amphitrite ornata hemoglobin/dehaloperoxidase. Insights into the evolutional structure-function adaptations.
Arch.Biochem.Biophys., 545, 2014
4KGX
DownloadVisualize
BU of 4kgx by Molmil
The R state structure of E. coli ATCase with CTP bound
Descriptor: Aspartate carbamoyltransferase, Aspartate carbamoyltransferase regulatory chain, CYTIDINE-5'-TRIPHOSPHATE, ...
Authors:Cockrell, G.M, Zheng, Y, Guo, W, Peterson, A.W, Kantrowitz, E.R.
Deposit date:2013-04-29
Release date:2013-11-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.202 Å)
Cite:New Paradigm for Allosteric Regulation of Escherichia coli Aspartate Transcarbamoylase.
Biochemistry, 52, 2013
2QFJ
DownloadVisualize
BU of 2qfj by Molmil
Crystal Structure of First Two RRM Domains of FIR Bound to ssDNA from a Portion of FUSE
Descriptor: DNA (5'-D(*DTP*DCP*DGP*DGP*DGP*DAP*DTP*DTP*DTP*DTP*DTP*DTP*DAP*DTP*DTP*DTP*DTP*DGP*DTP*DGP*DTP*DTP*DAP*DTP*DT)-3'), FBP-interacting repressor
Authors:Crichlow, G.V, Yang, Y, Fan, C, Lolis, E, Braddock, D.
Deposit date:2007-06-27
Release date:2008-03-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Dimerization of FIR upon FUSE DNA binding suggests a mechanism of c-myc inhibition
EMBO J., 27, 2007
4KMZ
DownloadVisualize
BU of 4kmz by Molmil
Human folate receptor beta (FOLR2) in complex with the folate
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, FOLIC ACID, ...
Authors:Wibowo, A.S, Dann III, C.E.
Deposit date:2013-05-08
Release date:2013-08-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of human folate receptors reveal biological trafficking states and diversity in folate and antifolate recognition.
Proc.Natl.Acad.Sci.USA, 110, 2013
2QDF
DownloadVisualize
BU of 2qdf by Molmil
Structure of N-terminal domain of E. Coli YaeT
Descriptor: MAGNESIUM ION, Outer membrane protein assembly factor yaeT
Authors:Kim, S, Malinverni, J.C, Sliz, P, Silhavy, T.J, Harrison, S.C, Kahne, D.
Deposit date:2007-06-20
Release date:2007-09-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure and function of an essential component of the outer membrane protein assembly machine.
Science, 317, 2007
3H6O
DownloadVisualize
BU of 3h6o by Molmil
Activator-Bound Structure of Human Pyruvate Kinase M2
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, 6-(2-fluorobenzyl)-2,4-dimethyl-4,6-dihydro-5H-thieno[2',3':4,5]pyrrolo[2,3-d]pyridazin-5-one, Pyruvate kinase isozymes M1/M2, ...
Authors:Hong, B, Dimov, S, Tempel, W, Auld, D, Thomas, C, Boxer, M, Jianq, J.-K, Skoumbourdis, A, Min, S, Southall, N, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Inglese, J, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2009-04-23
Release date:2009-05-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Activator-Bound Structures of Human Pyruvate Kinase M2
to be published
2QDQ
DownloadVisualize
BU of 2qdq by Molmil
Crystal structure of the talin dimerisation domain
Descriptor: Talin-1
Authors:Gingras, A.R, Putz, N.S.M, Bate, N, Barsukov, I.L, Critchley, D.R.C.
Deposit date:2007-06-21
Release date:2008-01-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The structure of the C-terminal actin-binding domain of talin.
Embo J., 27, 2008
2HII
DownloadVisualize
BU of 2hii by Molmil
heterotrimeric PCNA sliding clamp
Descriptor: PCNA1 (SSO0397), PCNA2 (SSO1047), PCNA3 (SSO0405)
Authors:Pascal, J.M, Tsodikov, O.V, Ellenberger, T.
Deposit date:2006-06-29
Release date:2006-11-07
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:A Flexible Interface between DNA Ligase and PCNA Supports Conformational Switching and Efficient Ligation of DNA.
Mol.Cell, 24, 2006
2QGX
DownloadVisualize
BU of 2qgx by Molmil
Ubiquitin-conjugating enzyme E2Q
Descriptor: Ubiquitin-conjugating enzyme E2 Q1
Authors:Neculai, D, Avvakumov, G.V, Xue, S, Walker, J.R, Mackenzie, F, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Sicheri, F, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
Deposit date:2007-06-29
Release date:2008-03-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:A human ubiquitin conjugating enzyme (E2)-HECT E3 ligase structure-function screen.
Mol Cell Proteomics, 11, 2012
4KL0
DownloadVisualize
BU of 4kl0 by Molmil
Crystal structure of the effector protein XOO4466
Descriptor: CALCIUM ION, Putative uncharacterized protein
Authors:Yu, S, Rhee, S.
Deposit date:2013-05-07
Release date:2013-10-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.598 Å)
Cite:Crystal structure of the effector protein XOO4466 from Xanthomonas oryzae
J.Struct.Biol., 184, 2013
2QED
DownloadVisualize
BU of 2qed by Molmil
Crystal structure of Salmonella thyphimurium LT2 glyoxalase II
Descriptor: 1,2-ETHANEDIOL, FE (III) ION, Hydroxyacylglutathione hydrolase
Authors:Leite, N.R, Campos Bermudez, V.A, Krogh, R, Oliva, G, Soncini, F.C, Vila, A.J.
Deposit date:2007-06-25
Release date:2007-10-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Biochemical and Structural Characterization of Salmonella typhimurium Glyoxalase II: New Insights into Metal Ion Selectivity
Biochemistry, 46, 2007
2QHE
DownloadVisualize
BU of 2qhe by Molmil
Crystal structure of Ser49-PLA2 (ecarpholin S) from Echis carinatus sochureki snake venom
Descriptor: Phospholipase A2
Authors:Zhou, X, Valiyaveettil, S, Go, M.L, Kini, R.M, Sivaraman, J.
Deposit date:2007-07-02
Release date:2007-10-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Characterization of Myotoxic Ecarpholin S from Echis carinatus Venom
Biophys.J., 95, 2008
2HK0
DownloadVisualize
BU of 2hk0 by Molmil
Crystal structure of D-psicose 3-epimerase (DPEase) in the absence of substrate
Descriptor: D-PSICOSE 3-EPIMERASE
Authors:Kim, K, Kim, H.J, Oh, D.K, Cha, S.S, Rhee, S.
Deposit date:2006-07-03
Release date:2006-08-29
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of d-Psicose 3-epimerase from Agrobacterium tumefaciens and its Complex with True Substrate d-Fructose: A Pivotal Role of Metal in Catalysis, an Active Site for the Non-phosphorylated Substrate, and its Conformational Changes
J.Mol.Biol., 361, 2006
3HAL
DownloadVisualize
BU of 3hal by Molmil
Crystal structure of Rabbit acidic fibroblast growth factor
Descriptor: CHLORIDE ION, Fibroblast growth factor 1 isoform 1, SULFATE ION
Authors:Blaber, M, Lee, J.
Deposit date:2009-05-01
Release date:2009-12-22
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray structure and biophysical properties of rabbit fibroblast growth factor 1.
Acta Crystallogr.,Sect.F, 65, 2009
3H9Q
DownloadVisualize
BU of 3h9q by Molmil
Crystal structure of E. coli MccB + SeMet MccA
Descriptor: MccB protein, Microcin C7 ANALOG, SULFATE ION, ...
Authors:Regni, C.A, Roush, R.F, Miller, D, Nourse, A, Walsh, C.T, Schulman, B.A.
Deposit date:2009-04-30
Release date:2009-06-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:How the MccB bacterial ancestor of ubiquitin E1 initiates biosynthesis of the microcin C7 antibiotic.
Embo J., 28, 2009
4KN2
DownloadVisualize
BU of 4kn2 by Molmil
Human folate receptor beta (FOLR2) in complex with antifolate pemetrexed
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-{4-[2-(2-AMINO-4-OXO-4,7-DIHYDRO-3H-PYRROLO[2,3-D]PYRIMIDIN-5-YL)-ETHYL]-BENZOYLAMINO}-PENTANEDIOIC ACID, CHLORIDE ION, ...
Authors:Wibowo, A.S, Dann III, C.E.
Deposit date:2013-05-08
Release date:2013-08-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structures of human folate receptors reveal biological trafficking states and diversity in folate and antifolate recognition.
Proc.Natl.Acad.Sci.USA, 110, 2013
3HAZ
DownloadVisualize
BU of 3haz by Molmil
Crystal structure of bifunctional proline utilization A (PutA) protein
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Tanner, J.J.
Deposit date:2009-05-03
Release date:2010-02-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the bifunctional proline utilization A flavoenzyme from Bradyrhizobium japonicum
Proc.Natl.Acad.Sci.USA, 107, 2010
4KNN
DownloadVisualize
BU of 4knn by Molmil
Crystal structure of human carbonic anhydrase isozyme XIII with 2-Chloro-4-[(pyrimidin-2-ylsulfanyl)acetyl]benzenesulfonamide
Descriptor: 1,2-ETHANEDIOL, 2-chloro-4-[(pyrimidin-2-ylsulfanyl)acetyl]benzenesulfonamide, ACETIC ACID, ...
Authors:Smirnov, A, Manakova, E, Grazulis, S.
Deposit date:2013-05-10
Release date:2013-11-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.404 Å)
Cite:Benzenesulfonamides with pyrimidine moiety as inhibitors of human carbonic anhydrases I, II, VI, VII, XII, and XIII
Bioorg.Med.Chem., 21, 2013
2HQ0
DownloadVisualize
BU of 2hq0 by Molmil
Structure of RafE from Streptococcus pneumoniae
Descriptor: ACETATE ION, SODIUM ION, Sugar ABC transporter, ...
Authors:Paterson, N.G, Riboldi-Tunnicliffe, A, Mitchell, T.J, Isaacs, N.W.
Deposit date:2006-07-18
Release date:2007-07-31
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:High resolution crystal structures of RafE from Streptococcus pneumoniae
To be Published
3HAS
DownloadVisualize
BU of 3has by Molmil
Crystal structure of bacteriorhodopsin mutant L152A crystallized from bicelles
Descriptor: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, Bacteriorhodopsin, DECANE, ...
Authors:Joh, N.H, Yang, D, Bowie, J.U.
Deposit date:2009-05-02
Release date:2009-09-22
Last modified:2021-10-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Similar energetic contributions of packing in the core of membrane and water-soluble proteins.
J.Am.Chem.Soc., 131, 2009
4KOQ
DownloadVisualize
BU of 4koq by Molmil
Crystal Structure of WHY3 from Arabidopsis thaliana
Descriptor: PHOSPHATE ION, Single-stranded DNA-binding protein WHY3, chloroplastic
Authors:Cappadocia, L, Parent, J.S, Brisson, N, Sygusch, J.
Deposit date:2013-05-12
Release date:2013-11-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:A family portrait: structural comparison of the Whirly proteins from Arabidopsis thaliana and Solanum tuberosum.
Acta Crystallogr.,Sect.F, 69, 2013

222624

數據於2024-07-17公開中

PDB statisticsPDBj update infoContact PDBjnumon